ap1s3b cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	ap1s3b
Entrez Gene ID	447897
Full Name	adaptor-related protein complex 1, sigma 3 subunit, b
Synonyms	zgc:101676
General protein information	Preferred Names adaptor-related protein complex 1, sigma 3 subunit, b Names AP-1 complex subunit sigma-3
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001004635.1	NP_001004635.1	AP-1 complex subunit sigma-3

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	AP1S3	XP_516121.2
Bos taurus (cattle)	AP1S3	NP_001096766.1
	LOC710257	XP_001098858.2
Canis lupus familiaris (dog)	AP1S3	XP_536088.3
Danio rerio (zebrafish)	ap1s3a	NP_001017720.1
Mus musculus (house mouse)	Ap1s3	NP_898848.1
Gallus gallus (chicken)	AP1S3	NP_001025179.1
Oryza sativa (rice)	Os03g0811300	NP_001051670.1
Homo sapiens (human)	AP1S3	NP_001034658.1
Rattus norvegicus (Norway rat)	Ap1s3	NP_001165621.1
Xenopus tropicalis (tropical clawed frog)	ap1s3	NP_001016579.1
Danio rerio (zebrafish)	ap1s3b	NP_001004635.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

On the crucial cerebellar wound healing-related pathways and their cross-talks after traumatic brain injury in Danio rerio.
Wu CC, Tsai TH, Chang C, Lee TT, Lin C, Cheng IH, Sun MC, Chuang YJ, Chen BS
PloS one9(6)e97902(2014)

Comparative analysis of period genes in teleost fish genomes.
Wang H
Journal of molecular evolution67(1)29-40(2008 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ap1s3b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ap1s3b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa36056	NM_001004635.1 Latest version!	Danio rerio adaptor related protein complex 1 subunit sigma 3b (ap1s3b), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ap1s3b ( NM_001004635.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001004635.1 Danio rerio adaptor related protein complex 1 subunit sigma 3b (ap1s3b), mRNA.

Price & Availability↑

CloneID	ODa36056
Clone ID Related Accession (Same CDS sequence)	NM_001004635.1
Accession Version	NM_001004635.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 465bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	AP-1 complex subunit sigma-3
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081385.1. ##Evidence-Data-START## Transcript exon combination :: BC081385.1, BC150444.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168447, SAMEA2168448 [ECO:0000348] ##Evidence-Data-END##

ATGATGCATT TCCTGCTGCT GTTCAGTCGT CAGGGGAAGT TGCGTCTGCA GAAATGGTTT 
CTGCCTCTTC CGGAGAGAGA TAGAAAGAAG ATTGTAAAAG ATATGACTAC TATGGTGTTG 
GCACGAAAAC CGCGTACATG CAACTTTATG CACTGGAAGG ACCTGAAGAT CGTCTATAAG 
AGGTACGCCA GCCTGTATTT CTGTTGTGGT TTGGAGAACC AGGATAATGA ACTTCTGGCT 
TTGGAGATTC TGCACCGTTA TGTGGAGCTA CTCGACAAAT ACTTCGGCAA TGTGTGTGAG 
CTGGACATCA TCTTCAACTT TGAGAAGGCT TATTTCATCT TGGATGAGTT TCTGATGGGT 
GGAGAGATCC AGGAGACATC CAAACAGTCC ATAGCCAAAT CTATAGAGGC CTCAGATATG 
CTGCAAGAGA CTATGGAGGA ATACATGAGC AAACCGGCCT TCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001004635.1
CDS	101..565
Translation	MMHFLLLFSRQGKLRLQKWFLPLPERDRKKIVKDMTTMVLARKPRTCNFMHWKDLKIVYKRYASLYFCCGLENQDNELLALEILHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFLMGGEIQETSKQSIAKSIEASDMLQETMEEYMSKPAF

Target ORF information:

RefSeq Version	NM_001004635.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio adaptor related protein complex 1 subunit sigma 3b (ap1s3b), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001004635.1

ORF Insert Sequence:

ATGATGCATT TCCTGCTGCT GTTCAGTCGT CAGGGGAAGT TGCGTCTGCA GAAATGGTTT 
CTGCCTCTTC CGGAGAGAGA TAGAAAGAAG ATTGTAAAAG ATATGACTAC TATGGTGTTG 
GCACGAAAAC CGCGTACATG CAACTTTATG CACTGGAAGG ACCTGAAGAT CGTCTATAAG 
AGGTACGCCA GCCTGTATTT CTGTTGTGGT TTGGAGAACC AGGATAATGA ACTTCTGGCT 
TTGGAGATTC TGCACCGTTA TGTGGAGCTA CTCGACAAAT ACTTCGGCAA TGTGTGTGAG 
CTGGACATCA TCTTCAACTT TGAGAAGGCT TATTTCATCT TGGATGAGTT TCTGATGGGT 
GGAGAGATCC AGGAGACATC CAAACAGTCC ATAGCCAAAT CTATAGAGGC CTCAGATATG 
CTGCAAGAGA CTATGGAGGA ATACATGAGC AAACCGGCCT TCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

On the crucial cerebellar wound healing-related pathways and their cross-talks after traumatic brain injury in Danio rerio.
PloS one9(6)e97902(2014)
Wu CC,Tsai TH,Chang C,Lee TT,Lin C,Cheng IH,Sun MC,Chuang YJ,Chen BS

Comparative analysis of period genes in teleost fish genomes.
Journal of molecular evolution67(1)29-40(2008 Jul)
Wang H