rpp25l cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	rpp25l
Entrez Gene ID	436813
Full Name	ribonuclease P/MRP 25 subunit-like
Synonyms	c9orf23,zgc:92794
General protein information	Preferred Names ribonuclease P/MRP 25 subunit-like Names ribonuclease P protein subunit p25-like protein
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009292532.2	XP_009290807.1	ribonuclease P protein subunit p25-like protein isoform X1
NM_001002540.1	NP_001002540.1	ribonuclease P protein subunit p25-like protein

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	RPP25L	XP_001161736.1
Bos taurus (cattle)	RPP25L	NP_001039576.1
Mus musculus (house mouse)	Rpp25l	NP_081554.2
Danio rerio (zebrafish)	rpp25l	NP_001002540.1
Drosophila melanogaster (fruit fly)	CG9422	NP_724490.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP007301	XP_308518.4
	RPP25L	XP_001096868.1
Gallus gallus (chicken)	C9ORF23	XP_424977.1
Homo sapiens (human)	RPP25L	NP_680545.1
Rattus norvegicus (Norway rat)	Rpp25l	NP_001100118.1

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Inventory and analysis of the protein subunits of the ribonucleases P and MRP provides further evidence of homology between the yeast and human enzymes.
Rosenblad MA, L?pez MD, Piccinelli P, Samuelsson T
Nucleic acids research34(18)5145-56(2006)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following rpp25l gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rpp25l cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa33675	NM_001002540.1 Latest version!	Danio rerio ribonuclease P/MRP 25 subunit-like (rpp25l), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa41063	XM_009292532.2 Latest version!	Danio rerio ribonuclease P/MRP 25 subunit-like (rpp25l), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

rpp25l ( NM_001002540.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001002540.1 Danio rerio ribonuclease P/MRP 25 subunit-like (rpp25l), mRNA.

Price & Availability↑

CloneID	ODa33675
Clone ID Related Accession (Same CDS sequence)	NM_001002540.1
Accession Version	NM_001002540.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 675bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	ribonuclease P protein subunit p25-like protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076268.1. ##Evidence-Data-START## Transcript exon combination :: BC076268.1, EH498055.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGAGAACT ACAGAAAAGC AAACACAATA GAGCAGCCCT GTCCATGTCC GTTCCCCGAC 
CTGCCCAGCG ACACTCCAGA AGTTCGAGTG AAGGATGGTA GCAAAATCCG CAACCTCATG 
AGGTTTGCTT TAAGCCGTAT GGAGGAGGAA ACAGCAGCCT CGGCAGATCA TGAAGGTTCA 
GAGGTGAGCG TTGGGACAGG GGACAATCTG TGTCGCCAAA TAGTATTCAC AGGCGTGGGT 
CAGAGCGTTG CAAAAGCAAT CACGTGTGTA GAGATCATGA AACGGCGCAT TCATGGGCTA 
CATCAGCTCA CTAAGCTGGC CTACCGCACA CTTCAGGATG TCTGGGAGCC GCTGGAGCCT 
GGGGCCGGGC TGGACAGTCT CACCGTCAGC AGAAATGTAC CTAGTATTTG GGTTCTTCTC 
TCAAGAGACT CGCTTGATAA GAACCAGCCG GGTTATCAAG CTCCAGGCTC TTTTGACGCC 
TTGTGGATTC AGGCTCTCAA AGAGGAAGCA GCAACTCCGA GACATGGACA GAGAAGGAAG 
AGGGGGGGAA CTGGGACTGG ACGGGCAGAA GTGGGTGGTA GGGGAAAGGG GCCGCGTAAA 
CACCCCGGGC GACCTGGAGA TACACGAAAA CCTCCAGGTC ATGCAGGTGG TGGACAGGAG 
GGAATGAACG TATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001002540.1
CDS	243..917
Translation	MENYRKANTIEQPCPCPFPDLPSDTPEVRVKDGSKIRNLMRFALSRMEEETAASADHEGSEVSVGTGDNLCRQIVFTGVGQSVAKAITCVEIMKRRIHGLHQLTKLAYRTLQDVWEPLEPGAGLDSLTVSRNVPSIWVLLSRDSLDKNQPGYQAPGSFDALWIQALKEEAATPRHGQRRKRGGTGTGRAEVGGRGKGPRKHPGRPGDTRKPPGHAGGGQEGMNV

Target ORF information:

RefSeq Version	NM_001002540.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ribonuclease P/MRP 25 subunit-like (rpp25l), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001002540.1

ORF Insert Sequence:

ATGGAGAACT ACAGAAAAGC AAACACAATA GAGCAGCCCT GTCCATGTCC GTTCCCCGAC 
CTGCCCAGCG ACACTCCAGA AGTTCGAGTG AAGGATGGTA GCAAAATCCG CAACCTCATG 
AGGTTTGCTT TAAGCCGTAT GGAGGAGGAA ACAGCAGCCT CGGCAGATCA TGAAGGTTCA 
GAGGTGAGCG TTGGGACAGG GGACAATCTG TGTCGCCAAA TAGTATTCAC AGGCGTGGGT 
CAGAGCGTTG CAAAAGCAAT CACGTGTGTA GAGATCATGA AACGGCGCAT TCATGGGCTA 
CATCAGCTCA CTAAGCTGGC CTACCGCACA CTTCAGGATG TCTGGGAGCC GCTGGAGCCT 
GGGGCCGGGC TGGACAGTCT CACCGTCAGC AGAAATGTAC CTAGTATTTG GGTTCTTCTC 
TCAAGAGACT CGCTTGATAA GAACCAGCCG GGTTATCAAG CTCCAGGCTC TTTTGACGCC 
TTGTGGATTC AGGCTCTCAA AGAGGAAGCA GCAACTCCGA GACATGGACA GAGAAGGAAG 
AGGGGGGGAA CTGGGACTGG ACGGGCAGAA GTGGGTGGTA GGGGAAAGGG GCCGCGTAAA 
CACCCCGGGC GACCTGGAGA TACACGAAAA CCTCCAGGTC ATGCAGGTGG TGGACAGGAG 
GGAATGAACG TATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

rpp25l ( XM_009292532.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009290807.1 Danio rerio ribonuclease P/MRP 25 subunit-like (rpp25l), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa41063
Clone ID Related Accession (Same CDS sequence)	XM_009292532.2
Accession Version	XM_009292532.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 675bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	ribonuclease P protein subunit p25-like protein isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007127.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009292532.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGAACT ACAGAAAAGC AAACACAATA GAGCAGCCCT GCCCATGTCC GTTCCCCGAC 
CTGCCCAGCG ACACTCCAGA AGTTCGAGTG AAGGATGGTA GCAAAATCCG CAACCTCATG 
AGGTTTGCTT TAAGCCGTAT GGAGGAGAAA ACAGCAGCCT CGGCAGATCA TGAAGGTTCA 
GAGGTGAGCG TTGGGACAGG GGACAATCTG TGTCGCCAAA TAGTATTCAC AGGCGTGGGT 
CAGAGCGTTG CAAAAGCAAT CACGTGTGTA GAGATCATGA AACGGCGCAT TCATGGGCTA 
CATCAGCTCA CTAAGCTGGC CTACCGCACA CTTCAGGATG TCTGGGAGCC GCTGGAGCCT 
GGGGCCGGGC TGGACAGTCT CACCGTCAGC AGAAATGTAC CTAGTATTTG GGTTCTTCTC 
TCAAGAGACT CGCTTGATAA GAACCAGCCG GGTTATCAAG CTCCAGGCTC TTTTGACGCC 
TTGTGGATTC AGGCTCTCAA AGAGGAAGCA GCAACTCCGA GACATGGACA GAGAAGGAAG 
AGGGGGGGAA CTGGGACTGG ACGGGCAGAA GTGGGTGGTA GGGGAAAGGG GCCGCGTAAA 
CACCCCGGGC GACCTGGAGA TACACGAAAA CCTCCAGGTC ATGCAGGTGG TGGACAGGAG 
GGAATGAACG TATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009290807.1
CDS	104..778
Translation	MENYRKANTIEQPCPCPFPDLPSDTPEVRVKDGSKIRNLMRFALSRMEEKTAASADHEGSEVSVGTGDNLCRQIVFTGVGQSVAKAITCVEIMKRRIHGLHQLTKLAYRTLQDVWEPLEPGAGLDSLTVSRNVPSIWVLLSRDSLDKNQPGYQAPGSFDALWIQALKEEAATPRHGQRRKRGGTGTGRAEVGGRGKGPRKHPGRPGDTRKPPGHAGGGQEGMNV

Target ORF information:

RefSeq Version	XM_009292532.2
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio ribonuclease P/MRP 25 subunit-like (rpp25l), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009292532.2

ORF Insert Sequence:

ATGGAGAACT ACAGAAAAGC AAACACAATA GAGCAGCCCT GCCCATGTCC GTTCCCCGAC 
CTGCCCAGCG ACACTCCAGA AGTTCGAGTG AAGGATGGTA GCAAAATCCG CAACCTCATG 
AGGTTTGCTT TAAGCCGTAT GGAGGAGAAA ACAGCAGCCT CGGCAGATCA TGAAGGTTCA 
GAGGTGAGCG TTGGGACAGG GGACAATCTG TGTCGCCAAA TAGTATTCAC AGGCGTGGGT 
CAGAGCGTTG CAAAAGCAAT CACGTGTGTA GAGATCATGA AACGGCGCAT TCATGGGCTA 
CATCAGCTCA CTAAGCTGGC CTACCGCACA CTTCAGGATG TCTGGGAGCC GCTGGAGCCT 
GGGGCCGGGC TGGACAGTCT CACCGTCAGC AGAAATGTAC CTAGTATTTG GGTTCTTCTC 
TCAAGAGACT CGCTTGATAA GAACCAGCCG GGTTATCAAG CTCCAGGCTC TTTTGACGCC 
TTGTGGATTC AGGCTCTCAA AGAGGAAGCA GCAACTCCGA GACATGGACA GAGAAGGAAG 
AGGGGGGGAA CTGGGACTGG ACGGGCAGAA GTGGGTGGTA GGGGAAAGGG GCCGCGTAAA 
CACCCCGGGC GACCTGGAGA TACACGAAAA CCTCCAGGTC ATGCAGGTGG TGGACAGGAG 
GGAATGAACG TATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Inventory and analysis of the protein subunits of the ribonucleases P and MRP provides further evidence of homology between the yeast and human enzymes.
Nucleic acids research34(18)5145-56(2006)
Rosenblad MA,L?pez MD,Piccinelli P,Samuelsson T