map1lc3c cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	map1lc3c
Entrez Gene ID	393268
Full Name	microtubule-associated protein 1 light chain 3 gamma
Synonyms	KM0005,zgc:56565
General protein information	Preferred Names microtubule-associated protein 1 light chain 3 gamma Names microtubule-associated proteins 1A/1B light chain 3C MAP1 light chain 3-like protein 2 microtubule-associated protein 1-light chain 3C
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_200298.2	NP_956592.1	microtubule-associated proteins 1A/1B light chain 3C

Pathways from BioSystems

Homologies

Gallus gallus (chicken)	MAP1LC3C	XP_419549.2
Homo sapiens (human)	MAP1LC3C	NP_001004343.1
Pan troglodytes (chimpanzee)	MAP1LC3C	XP_514305.2
Canis lupus familiaris (dog)	MAP1LC3C	XP_005622638.1
	MAP1LC3B2	XP_001104437.1
Bos taurus (cattle)	LOC507432	NP_001094528.1
Danio rerio (zebrafish)	map1lc3c	NP_956592.1
Xenopus tropicalis (tropical clawed frog)	map1lc3c	NP_001037987.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Identification and expression analysis of the zebrafish orthologues of the mammalian MAP1LC3 gene family.
Ganesan S, Moussavi Nik SH, Newman M, Lardelli M
Experimental cell research328(1)228-37(2014 Oct)

Ambra1 knockdown in zebrafish leads to incomplete development due to severe defects in organogenesis.
Benato F, Skobo T, Gioacchini G, Moro I, Ciccosanti F, Piacentini M, Fimia GM, Carnevali O, Dalla Valle L
Autophagy9(4)476-95(2013 Apr)

Interplay between autophagy and apoptosis in the development of Danio rerio follicles and the effects of a probiotic.
Gioacchini G, Dalla Valle L, Benato F, Fimia GM, Nardacci R, Ciccosanti F, Piacentini M, Borini A, Carnevali O
Reproduction, fertility, and development25(8)1115-25(2013)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following map1lc3c gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the map1lc3c cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa32769	NM_200298.2 Latest version!	Danio rerio microtubule-associated protein 1 light chain 3 gamma (map1lc3c), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

map1lc3c ( NM_200298.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956592.1 Danio rerio microtubule-associated protein 1 light chain 3 gamma (map1lc3c), mRNA.

Price & Availability↑

CloneID	ODa32769
Clone ID Related Accession (Same CDS sequence)	NM_200298.2
Accession Version	NM_200298.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 387bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-20
Organism	Danio rerio(zebrafish)
Product	microtubule-associated proteins 1A/1B light chain 3C
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY398373.1. On Jan 23, 2004 this sequence version replaced NM_200298.1. ##Evidence-Data-START## Transcript exon combination :: AY398373.1, EH536710.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476783 [ECO:0000348] ##Evidence-Data-END##

ATGCCTCCGT TTGAGAAAAC TCCACATCCC AAACCCTTCA AACAGAGGAA GAGCTTAGCA 
ACGAGGAAAC AAGAGGTGGC GGGAATACGG ACTAAGTTTC CGACTAAAAT CCCGGTAATA 
ATCGAGCGAT ATCAGAGAGA GAAGTTTTTG CCGCCTCTGG ATAAAACCAA GTTCCTCGTG 
CCTCAGGAGC TCACCATGAC CCAGTTCGTC ACCATCATCA GGAATCGGAT GACGCTGATG 
CCCAATCAGG CCTTTTACCT GCTCATCAAT AACTCTGGCA TCGCCAGCAT GTCTATGACC 
ATGGCGCAGC TTTATAAAGA CCACAAAGAT GAAGACGGGT TTCTCTACAT GACCTACGCC 
TCGCAGGAGA TGTTCGGACA CAGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956592.1
CDS	18..404
Translation	MPPFEKTPHPKPFKQRKSLATRKQEVAGIRTKFPTKIPVIIERYQREKFLPPLDKTKFLVPQELTMTQFVTIIRNRMTLMPNQAFYLLINNSGIASMSMTMAQLYKDHKDEDGFLYMTYASQEMFGHR

Target ORF information:

RefSeq Version	NM_200298.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio microtubule-associated protein 1 light chain 3 gamma (map1lc3c), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_200298.2

ORF Insert Sequence:

ATGCCTCCGT TTGAGAAAAC TCCACATCCC AAACCCTTCA AACAGAGGAA GAGCTTAGCA 
ACGAGGAAAC AAGAGGTGGC GGGAATACGG ACTAAGTTTC CGACTAAAAT CCCGGTAATA 
ATCGAGCGAT ATCAGAGAGA GAAGTTTTTG CCGCCTCTGG ATAAAACCAA GTTCCTCGTG 
CCTCAGGAGC TCACCATGAC CCAGTTCGTC ACCATCATCA GGAATCGGAT GACGCTGATG 
CCCAATCAGG CCTTTTACCT GCTCATCAAT AACTCTGGCA TCGCCAGCAT GTCTATGACC 
ATGGCGCAGC TTTATAAAGA CCACAAAGAT GAAGACGGGT TTCTCTACAT GACCTACGCC 
TCGCAGGAGA TGTTCGGACA CAGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Identification and expression analysis of the zebrafish orthologues of the mammalian MAP1LC3 gene family.
Experimental cell research328(1)228-37(2014 Oct)
Ganesan S,Moussavi Nik SH,Newman M,Lardelli M

Ambra1 knockdown in zebrafish leads to incomplete development due to severe defects in organogenesis.
Autophagy9(4)476-95(2013 Apr)
Benato F,Skobo T,Gioacchini G,Moro I,Ciccosanti F,Piacentini M,Fimia GM,Carnevali O,Dalla Valle L

Interplay between autophagy and apoptosis in the development of Danio rerio follicles and the effects of a probiotic.
Reproduction, fertility, and development25(8)1115-25(2013)
Gioacchini G,Dalla Valle L,Benato F,Fimia GM,Nardacci R,Ciccosanti F,Piacentini M,Borini A,Carnevali O