PTX4 cDNA ORF clone, Danio rerio(Zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	PTX4
Entrez Gene ID	100004372
Full Name	pentraxin 4, long
Synonyms	fb77c07,si:ch211-157c3.5,wu:fb77c07
General protein information	Preferred Names pentraxin 4, long Names pentraxin-4
Gene Type	protein-coding
Organism	Danio rerio(Zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009299470.2	XP_009297745.1	pentraxin-4

Pathways from BioSystems

Homologies

Homo sapiens (human)	PTX4	NP_001013680.1
Bos taurus (cattle)	PTX4	XP_002698022.1
Mus musculus (house mouse)	Ptx4	NP_081023.1
Xenopus tropicalis (tropical clawed frog)	ptx4	XP_004918168.1
Pan troglodytes (chimpanzee)	PTX4	XP_523260.2
Canis lupus familiaris (dog)	PTX4	XP_853897.1
Rattus norvegicus (Norway rat)	Ptx4	XP_220237.3
Danio rerio (zebrafish)	ptx4	XP_001343697.3

Gene Ontology

The following PTX4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PTX4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa47911	XM_009299470.2 Latest version!	Danio rerio pentraxin 4, long (ptx4), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PTX4 ( XM_009299470.2 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_009297745.1 Danio rerio pentraxin 4, long (ptx4), mRNA.

Price & Availability↑

CloneID	ODa47911
Clone ID Related Accession (Same CDS sequence)	XM_009299470.2
Accession Version	XM_009299470.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1509bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	pentraxin-4
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009299470.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACCAGAC AGGTTGGAGG AAGTGTTTTT TTGCTGATCA CAGTCTTCTT GTTGATGCCT 
ATGAGCTGGA CAAGGAGAGG AGTACCGGCT GACACATTTA AAGCCTTGAA CAACAGACTG 
AGGACGCTGA ATCAGCAGTT CAAGAGATTT CAACAGATGA CCTCGACTCA TCTTCAGAGA 
ATTGGCAAAA ACCACAACGT TACAAACAAC GTAGATTTTA AATTTTTGAG TCAGCAGTTT 
GAGAGGATCT CCAGGGAGCT CCGTTCATTT AGAGAAATGA CAGAACACAG TCTGAATTCC 
CTCAAATCTT GGACGAAGAG TCTACAGAAA AAGACCAACA GGCTTCACTC CAGTCTGTCC 
AACATGACGA GAGCACTGTG GCAGAACAAC CATCACAACC TCAGAGAAAT ACACAAGCAG 
AGAGCAGCGT TGACTGATCT GTCCCATAAG ATCCAGAAAC AGCAAAGCCA AATCGACTCA 
TTGGAGTCCT TAAAAGATCA GGTTCAGGAT GGGATGCAGG ATCTTCAGAC GTCTCTCAAA 
AAACACCAGA CACGGATAAT GAAGTTGGAA AGTCAGATTC AAGAACTGTT AAAGATCATT 
TCAACTTCCA AGGCTGAAGA TCCTTTTAAT TCTATTAGGA AGCAACATGG AGTGCTCATG 
AGGCATGTTC AGACTCAACC AAAGTCCAGA GAGCACAGAA TAAGAGAGAG GTTGTTGTTG 
AGGTCAACGA AACAACCACA GACCACAATA AGGGAAAGAC AATGGCAGAG CACCACACAA 
CCAACAGTTC AGGCTCACGA GGAACTTTTT CAACTTCCAC TTCGACACAA AATCCCACAT 
GTTCAAAGTC CAAAGGAAGA AGCCAAAATT TGCAATGTGG GTTCAATGCT TCTGTTTCCA 
TCTACCTCCA CTGAAAATTA TGCCATCTTC CAGAAGACAT TCCAAACTGG AATACATGAG 
CTCTCTATTT GCACTTGGCT CAAAGTAGAC GCCAAGTATG TTGGAACAAT TTTTTCTTAC 
GCCACGGAAA ACAACGACAA TATGCTTGTT CTCTATGGTC ATAATTCTGG AAAACTGGGC 
CTTATGGATT TTGTGATTGG AGATCCAACT TATCGTGAAT TACCTTCACA AAATATCCTG 
GATGGCGAGT GGCACCATTT ATGCATCATC TGGTCTTCTA TCGAAGGCAG GTTTTGGTAT 
TATTTGGACC GTCATCTTAT ATCTAATGGA TCCAAGTTCC AAAAGGGCTA TGAGATCCCT 
CCTGGAGGCT TTGTGGTTCT GGGGCAGGAG CAGGATTCAC TTGGTGGGGA TTTCGATGTA 
GCAGAAGCAT TTGTGGGCAG ATTGGCTGGT TTTGCATTGT GGACTAGGAC TCTGAGCCCT 
GTTGAGGTGT CTGGACTGGC TGATGGAAAA GGAGTCCCAC AAGGAGCAGT GCTCAGCCTG 
GATGATGTAG ATCAGATGTC TGGTTCTGTT CAGCACATCA CCTGTGAGTG TCTGGAACAC 
TGCGTGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009297745.1
CDS	226..1734
Translation	MTRQVGGSVFLLITVFLLMPMSWTRRGVPADTFKALNNRLRTLNQQFKRFQQMTSTHLQRIGKNHNVTNNVDFKFLSQQFERISRELRSFREMTEHSLNSLKSWTKSLQKKTNRLHSSLSNMTRALWQNNHHNLREIHKQRAALTDLSHKIQKQQSQIDSLESLKDQVQDGMQDLQTSLKKHQTRIMKLESQIQELLKIISTSKAEDPFNSIRKQHGVLMRHVQTQPKSREHRIRERLLLRSTKQPQTTIRERQWQSTTQPTVQAHEELFQLPLRHKIPHVQSPKEEAKICNVGSMLLFPSTSTENYAIFQKTFQTGIHELSICTWLKVDAKYVGTIFSYATENNDNMLVLYGHNSGKLGLMDFVIGDPTYRELPSQNILDGEWHHLCIIWSSIEGRFWYYLDRHLISNGSKFQKGYEIPPGGFVVLGQEQDSLGGDFDVAEAFVGRLAGFALWTRTLSPVEVSGLADGKGVPQGAVLSLDDVDQMSGSVQHITCECLEHCV

Target ORF information:

RefSeq Version	XM_009299470.2
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio pentraxin 4, long (ptx4), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009299470.2

ORF Insert Sequence:

ATGACCAGAC AGGTTGGAGG AAGTGTTTTT TTGCTGATCA CAGTCTTCTT GTTGATGCCT 
ATGAGCTGGA CAAGGAGAGG AGTACCGGCT GACACATTTA AAGCCTTGAA CAACAGACTG 
AGGACGCTGA ATCAGCAGTT CAAGAGATTT CAACAGATGA CCTCGACTCA TCTTCAGAGA 
ATTGGCAAAA ACCACAACGT TACAAACAAC GTAGATTTTA AATTTTTGAG TCAGCAGTTT 
GAGAGGATCT CCAGGGAGCT CCGTTCATTT AGAGAAATGA CAGAACACAG TCTGAATTCC 
CTCAAATCTT GGACGAAGAG TCTACAGAAA AAGACCAACA GGCTTCACTC CAGTCTGTCC 
AACATGACGA GAGCACTGTG GCAGAACAAC CATCACAACC TCAGAGAAAT ACACAAGCAG 
AGAGCAGCGT TGACTGATCT GTCCCATAAG ATCCAGAAAC AGCAAAGCCA AATCGACTCA 
TTGGAGTCCT TAAAAGATCA GGTTCAGGAT GGGATGCAGG ATCTTCAGAC GTCTCTCAAA 
AAACACCAGA CACGGATAAT GAAGTTGGAA AGTCAGATTC AAGAACTGTT AAAGATCATT 
TCAACTTCCA AGGCTGAAGA TCCTTTTAAT TCTATTAGGA AGCAACATGG AGTGCTCATG 
AGGCATGTTC AGACTCAACC AAAGTCCAGA GAGCACAGAA TAAGAGAGAG GTTGTTGTTG 
AGGTCAACGA AACAACCACA GACCACAATA AGGGAAAGAC AATGGCAGAG CACCACACAA 
CCAACAGTTC AGGCTCACGA GGAACTTTTT CAACTTCCAC TTCGACACAA AATCCCACAT 
GTTCAAAGTC CAAAGGAAGA AGCCAAAATT TGCAATGTGG GTTCAATGCT TCTGTTTCCA 
TCTACCTCCA CTGAAAATTA TGCCATCTTC CAGAAGACAT TCCAAACTGG AATACATGAG 
CTCTCTATTT GCACTTGGCT CAAAGTAGAC GCCAAGTATG TTGGAACAAT TTTTTCTTAC 
GCCACGGAAA ACAACGACAA TATGCTTGTT CTCTATGGTC ATAATTCTGG AAAACTGGGC 
CTTATGGATT TTGTGATTGG AGATCCAACT TATCGTGAAT TACCTTCACA AAATATCCTG 
GATGGCGAGT GGCACCATTT ATGCATCATC TGGTCTTCTA TCGAAGGCAG GTTTTGGTAT 
TATTTGGACC GTCATCTTAT ATCTAATGGA TCCAAGTTCC AAAAGGGCTA TGAGATCCCT 
CCTGGAGGCT TTGTGGTTCT GGGGCAGGAG CAGGATTCAC TTGGTGGGGA TTTCGATGTA 
GCAGAAGCAT TTGTGGGCAG ATTGGCTGGT TTTGCATTGT GGACTAGGAC TCTGAGCCCT 
GTTGAGGTGT CTGGACTGGC TGATGGAAAA GGAGTCCCAC AAGGAGCAGT GCTCAGCCTG 
GATGATGTAG ATCAGATGTC TGGTTCTGTT CAGCACATCA CCTGTGAGTG TCTGGAACAC 
TGCGTGTAA