LOC109066878 cDNA ORF clone, Cyprinus carpio(common carp)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC109066878
Entrez Gene ID	109066878
Full Name	smoothened homolog
Gene Type	protein-coding
Organism	Cyprinus carpio(common carp)

mRNA and Protein(s)

mRNA	Protein	Name
XM_019083892.1	XP_018939437.1	smoothened homolog

Pathways from BioSystems
Gene Ontology

The following LOC109066878 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC109066878 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCy129954	XM_019083892.1 Latest version!	Cyprinus carpio smoothened homolog (LOC109066878), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC109066878 ( XM_019083892.1 ) cDNA ORF clone, Cyprinus carpio(common carp) -> XP_018939437.1 Cyprinus carpio smoothened homolog (LOC109066878), mRNA.

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CloneID	OCy129954
Clone ID Related Accession (Same CDS sequence)	XM_019083892.1
Accession Version	XM_019083892.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2469bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-11-09
Organism	Cyprinus carpio(common carp)
Product	smoothened homolog
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_031703.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Cyprinus carpio Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTCCTCCA AGCGCCTCTG CTCCATTGTT GGAGGCTTTT GGATGCTTTG GATCTGGGCA 
GCAACCTCTA TAATCGCGCA GGCGGTCATC TTGCACCCAA ATGAAACGAT ATTCAACGAC 
TTTTGTAAGA AATCCATAAC TTGTGAAGTA CTTAAAATAC CCAATACGTG CCTTGGTTCA 
CCCTTGCCGT ACACGCACAC GTCTCTGATT CTGGCTGAAG ACTCAGAAAC TCAAGAGGAA 
GCCTTGGAGA AATTGGCCAT GTGGTCTGGG TTGAGAAATG CTCCTCGCTG CTGGGCCGTC 
ATTCAACCGT TACTGTGTGC CGTTTACATG CCAAAATGTG AAAATGGAAA GGTCGAACTG 
CCCAGCCAGC ACCTGTGCCA AGCCACACGC AAACCTTGCA GTATTGTGGA GCGGGAGAGG 
GGCTGGCCCA ACTTCCTCAA GTGTGAAAAC AAGGAGCAGT TCCCTAAGGG TTGCCAGAAC 
GAGGTCCAGA AGATCAAATT CAACACTTCA GGACAGTGTG AGGCTCCCCT GGTCAAAACC 
GACATCCAGG CAAGTTGGTA CAAGGACGTG GAAGGTTGTG GGATCCAGTG CAACAATCCC 
CTGTTCACGG AAGACGAGCA CTCGGACATG CATAACTACA TTGCCATCTT CGGCTCCATC 
ACTCTCCTGT GTACCTTCTT TACGCTGGCC ACATTTCTCG CCGACTGGAA GAATTCCAAC 
CGTTACCCCG CTGTGATCCT CTTTTACGTC AACGCATGTT TCTTTATCGG AAGTATTGGA 
TGGCTCGCTC AGTTCATGGA TGGAGCCCGC AAGGAGATTG TGTGCAAAAG CGACGATACT 
ATGCGGCTTG GAGAGCCGTC ATCCACCGAG ACGCTGTCGT GCGTGATTAT CTTCGTCATT 
GTGTATTATT CGCTAATGTC TGGAGTCATT TGGTTTGTTA TGCTCACTTA TGCCTGGCAC 
ACATCGTTCA AAGCCCTGGG CACCACCCAT CAGCCTCTCT CTGGAAAAAC ATCCTATTTT 
CATCTGGTCA CATGGTCTGT TCCTTTCATT CTGACAGTTG CTATATTGGC CATTGCAGAG 
GTGGATGGAG ATTCGGTTAG CGGCATTTGC TTTGTTGGCT ATAAGAACTA CAGATACCGT 
GCAGGGTTTG TTCTGGCTCC TATCGGGGTG GTCCTTGTTG TTGGCGGCTA TTTCCTAATA 
CGAGGGGTTA TGACGTTGTT TTCCATTAAA AGTAACCATC CGGGGCTGCT CAGTGAAAAA 
GCTGCTAGTA AAATCAATGA AACCATGCTG AGGCTTGGCA TATTTGGATT CTTGGCCTTT 
GGTTTTGTTT TCATCACGTT TGGCTGCCAT TTCTACGACT TTTTCAACCA AGCTGAGTGG 
GAAAAAAGCT TCAGGGAATA TGTACTATGT GAGGCGAATG TCACCATAGC TCACCAGACC 
AACAAGCCGA TCCCAGAGTG TGCCATCAAG AACCGGCCTA GTCTCCTGGT GGAGAAGATC 
AACCTCTTCT CAATGTTCGG CACGGGCATC GCAATGAGCA CATGGGTATG GACGAAGGCC 
ACCATCCTTA TCTGGAAACG CACCTGGTTT AGAATCATTG GCCGAAGTGA TGATGAGCCG 
AAACGCATTA AGAAGAGTAA AATGATTGCC AAGGCATTTT CAAAGAGAAA AGAACTGCAG 
AAGGATCCAG AAAAAGAGCT GTCCTTCAGC ATGCACACCG TTTCTCATGA GGGACCTGTG 
GCGGGTATCA ACTTTGACCT GAATGAGCCA TCAATGGAAA TGTCTTCTGC ATGGGCCCAA 
CATGTGACCA AGATGGTGGC TAGAAGAGGG GCAATTTTAC CACAGGATAT CTCTGTGACA 
CCCACTGGAA CACCTGTTCC GCCTCCAGAG GAAAGGAACA AACTTTGGAT GGTTGAAGCA 
GAAATTTCTC CTGAAATGAT GAAAAGAAAG AAGAAGAAAA AGAGAAGGAA GGAAATACGG 
CCAACGGGTC CTGCAGCGGA CGAAGGGAAT CCTGCCTACC ACCGGAGGGA GTTTGGTCCC 
AGCTCAGTCC CCCGTCTCCC AAAACTTCCA GGTCACCGGA GTCTGGTGGC TAACCTTTGG 
GAGCAGCAGC GACAGCAGCA GGAGGAACAG GATATGCTAC CTGGAGCCTT CCCAGAATTC 
AGGCCTTCAT GTCCTCTTCC TTATCAGGAG AGGTATGGTG GGTTGGGATA CTTACGCAAT 
AAACCCTCCA GCCTCCCCCT TGCCAATCCC CTGACTCTAC GAGATAGCAT GCAAGATGAT 
TTGGGCAGCT TCCAGCAGTC ATCATGGCAA CCAAATGGGG TTTTCCGGTA CCTTGGGCAG 
GAGGCTTCCG CGATGGATGC TGGCAGGACT GCCGTTGTGC CACGGGCCGA TGGCAGGAGG 
GGTGTACCAA TACACTCCAG AACCAATCTT ATGGAGGCTG AGCTACTGGA TGCTGACTCA 
GATTTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018939437.1
CDS	597..3065
Translation	MSSKRLCSIVGGFWMLWIWAATSIIAQAVILHPNETIFNDFCKKSITCEVLKIPNTCLGSPLPYTHTSLILAEDSETQEEALEKLAMWSGLRNAPRCWAVIQPLLCAVYMPKCENGKVELPSQHLCQATRKPCSIVERERGWPNFLKCENKEQFPKGCQNEVQKIKFNTSGQCEAPLVKTDIQASWYKDVEGCGIQCNNPLFTEDEHSDMHNYIAIFGSITLLCTFFTLATFLADWKNSNRYPAVILFYVNACFFIGSIGWLAQFMDGARKEIVCKSDDTMRLGEPSSTETLSCVIIFVIVYYSLMSGVIWFVMLTYAWHTSFKALGTTHQPLSGKTSYFHLVTWSVPFILTVAILAIAEVDGDSVSGICFVGYKNYRYRAGFVLAPIGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWEKSFREYVLCEANVTIAHQTNKPIPECAIKNRPSLLVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWFRIIGRSDDEPKRIKKSKMIAKAFSKRKELQKDPEKELSFSMHTVSHEGPVAGINFDLNEPSMEMSSAWAQHVTKMVARRGAILPQDISVTPTGTPVPPPEERNKLWMVEAEISPEMMKRKKKKKRRKEIRPTGPAADEGNPAYHRREFGPSSVPRLPKLPGHRSLVANLWEQQRQQQEEQDMLPGAFPEFRPSCPLPYQERYGGLGYLRNKPSSLPLANPLTLRDSMQDDLGSFQQSSWQPNGVFRYLGQEASAMDAGRTAVVPRADGRRGVPIHSRTNLMEAELLDADSDF

Target ORF information:

RefSeq Version	XM_019083892.1
Organism	Cyprinus carpio(common carp)
Definition	Cyprinus carpio smoothened homolog (LOC109066878), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019083892.1

ORF Insert Sequence:

ATGTCCTCCA AGCGCCTCTG CTCCATTGTT GGAGGCTTTT GGATGCTTTG GATCTGGGCA 
GCAACCTCTA TAATCGCGCA GGCGGTCATC TTGCACCCAA ATGAAACGAT ATTCAACGAC 
TTTTGTAAGA AATCCATAAC TTGTGAAGTA CTTAAAATAC CCAATACGTG CCTTGGTTCA 
CCCTTGCCGT ACACGCACAC GTCTCTGATT CTGGCTGAAG ACTCAGAAAC TCAAGAGGAA 
GCCTTGGAGA AATTGGCCAT GTGGTCTGGG TTGAGAAATG CTCCTCGCTG CTGGGCCGTC 
ATTCAACCGT TACTGTGTGC CGTTTACATG CCAAAATGTG AAAATGGAAA GGTCGAACTG 
CCCAGCCAGC ACCTGTGCCA AGCCACACGC AAACCTTGCA GTATTGTGGA GCGGGAGAGG 
GGCTGGCCCA ACTTCCTCAA GTGTGAAAAC AAGGAGCAGT TCCCTAAGGG TTGCCAGAAC 
GAGGTCCAGA AGATCAAATT CAACACTTCA GGACAGTGTG AGGCTCCCCT GGTCAAAACC 
GACATCCAGG CAAGTTGGTA CAAGGACGTG GAAGGTTGTG GGATCCAGTG CAACAATCCC 
CTGTTCACGG AAGACGAGCA CTCGGACATG CATAACTACA TTGCCATCTT CGGCTCCATC 
ACTCTCCTGT GTACCTTCTT TACGCTGGCC ACATTTCTCG CCGACTGGAA GAATTCCAAC 
CGTTACCCCG CTGTGATCCT CTTTTACGTC AACGCATGTT TCTTTATCGG AAGTATTGGA 
TGGCTCGCTC AGTTCATGGA TGGAGCCCGC AAGGAGATTG TGTGCAAAAG CGACGATACT 
ATGCGGCTTG GAGAGCCGTC ATCCACCGAG ACGCTGTCGT GCGTGATTAT CTTCGTCATT 
GTGTATTATT CGCTAATGTC TGGAGTCATT TGGTTTGTTA TGCTCACTTA TGCCTGGCAC 
ACATCGTTCA AAGCCCTGGG CACCACCCAT CAGCCTCTCT CTGGAAAAAC ATCCTATTTT 
CATCTGGTCA CATGGTCTGT TCCTTTCATT CTGACAGTTG CTATATTGGC CATTGCAGAG 
GTGGATGGAG ATTCGGTTAG CGGCATTTGC TTTGTTGGCT ATAAGAACTA CAGATACCGT 
GCAGGGTTTG TTCTGGCTCC TATCGGGGTG GTCCTTGTTG TTGGCGGCTA TTTCCTAATA 
CGAGGGGTTA TGACGTTGTT TTCCATTAAA AGTAACCATC CGGGGCTGCT CAGTGAAAAA 
GCTGCTAGTA AAATCAATGA AACCATGCTG AGGCTTGGCA TATTTGGATT CTTGGCCTTT 
GGTTTTGTTT TCATCACGTT TGGCTGCCAT TTCTACGACT TTTTCAACCA AGCTGAGTGG 
GAAAAAAGCT TCAGGGAATA TGTACTATGT GAGGCGAATG TCACCATAGC TCACCAGACC 
AACAAGCCGA TCCCAGAGTG TGCCATCAAG AACCGGCCTA GTCTCCTGGT GGAGAAGATC 
AACCTCTTCT CAATGTTCGG CACGGGCATC GCAATGAGCA CATGGGTATG GACGAAGGCC 
ACCATCCTTA TCTGGAAACG CACCTGGTTT AGAATCATTG GCCGAAGTGA TGATGAGCCG 
AAACGCATTA AGAAGAGTAA AATGATTGCC AAGGCATTTT CAAAGAGAAA AGAACTGCAG 
AAGGATCCAG AAAAAGAGCT GTCCTTCAGC ATGCACACCG TTTCTCATGA GGGACCTGTG 
GCGGGTATCA ACTTTGACCT GAATGAGCCA TCAATGGAAA TGTCTTCTGC ATGGGCCCAA 
CATGTGACCA AGATGGTGGC TAGAAGAGGG GCAATTTTAC CACAGGATAT CTCTGTGACA 
CCCACTGGAA CACCTGTTCC GCCTCCAGAG GAAAGGAACA AACTTTGGAT GGTTGAAGCA 
GAAATTTCTC CTGAAATGAT GAAAAGAAAG AAGAAGAAAA AGAGAAGGAA GGAAATACGG 
CCAACGGGTC CTGCAGCGGA CGAAGGGAAT CCTGCCTACC ACCGGAGGGA GTTTGGTCCC 
AGCTCAGTCC CCCGTCTCCC AAAACTTCCA GGTCACCGGA GTCTGGTGGC TAACCTTTGG 
GAGCAGCAGC GACAGCAGCA GGAGGAACAG GATATGCTAC CTGGAGCCTT CCCAGAATTC 
AGGCCTTCAT GTCCTCTTCC TTATCAGGAG AGGTATGGTG GGTTGGGATA CTTACGCAAT 
AAACCCTCCA GCCTCCCCCT TGCCAATCCC CTGACTCTAC GAGATAGCAT GCAAGATGAT 
TTGGGCAGCT TCCAGCAGTC ATCATGGCAA CCAAATGGGG TTTTCCGGTA CCTTGGGCAG 
GAGGCTTCCG CGATGGATGC TGGCAGGACT GCCGTTGTGC CACGGGCCGA TGGCAGGAGG 
GGTGTACCAA TACACTCCAG AACCAATCTT ATGGAGGCTG AGCTACTGGA TGCTGACTCA 
GATTTTTAA