LOC107093623 cDNA ORF clone, Cyprinodon variegatus(sheepshead minnow)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107093623
Entrez Gene ID	107093623
Full Name	tripartite motif-containing protein 47-like
Gene Type	protein-coding
Organism	Cyprinodon variegatus(sheepshead minnow)

mRNA and Protein(s)

mRNA	Protein	Name
XM_015388803.1	XP_015244289.1	tripartite motif-containing protein 47-like

Pathways from BioSystems
Gene Ontology

The following LOC107093623 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107093623 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCy18818	XM_015388803.1 Latest version!	Cyprinodon variegatus tripartite motif-containing protein 47-like (LOC107093623), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107093623 ( XM_015388803.1 ) cDNA ORF clone, Cyprinodon variegatus(sheepshead minnow) -> XP_015244289.1 Cyprinodon variegatus tripartite motif-containing protein 47-like (LOC107093623), mRNA.

Price & Availability↑

CloneID	OCy18818
Clone ID Related Accession (Same CDS sequence)	XM_015388803.1
Accession Version	XM_015388803.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 714bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-13
Organism	Cyprinodon variegatus(sheepshead minnow)
Product	tripartite motif-containing protein 47-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015150889.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Cyprinodon variegatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 4% of CDS bases ##RefSeq-Attributes-END##

ATGGCTCAGC AAGGATATCA GATGGATTCT GTGAAATTCT CCTGTTCGAT CTGCTTGGAT 
CTCCTGAAAT ACCCGGTAAC TATCCCCTGT GGACACAACT ACTGCATGTA CTGTATTGGA 
TCGTTCTGGG ATAATGAGGA CAAGAAAGGG ATCTACAGCT GCCCTCAGTG TAGACAGACG 
TTTACACCGA GGCCTGATTT AGTGAAAAAC ACCATGTTAG CAGAGTTGGT GGAGGATCTG 
AAAAAGACTG GACTCCAGGC TCCTGCAGCT GATCACTGCT ATGCTGGACC TGAAGATGTG 
GCGTGTGATA TCTGCGCTGG GAGGAAGATG AAAGCTGTCA ACTCCTGTCT GGTCTGTTTA 
GTTTCTTACT GCGAGAATCA CCTCCAGCCT CACTATGATG TCTCTGCACT GAAGAAGCAC 
AAGCTGGTTG ACCCCTCCAA GAATCTCCAG GAGAACATCT GCTCTCGTCA TGATGAGGTG 
ATGAAGATCT TCTGTCGTAC TGATCAGCAG TGTATCTGTT ATCTCTGCAC CATGGATGAA 
CATAAAGGCC ATGAAACAGT CCTAGCTGGA GCAGAAAGGA CTGAGAAGCA GAAGAAGCTC 
CAGGAGAGAC GACAACAAAT CAATCAGAGA ATCCAGGACC AGGAGAAAGA TGTGAAGCTG 
CTTCAACAGG AGGTGGAGGC CATCAATGGC TCTGCTGATA AAGCAGTTAT GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015244289.1
CDS	139..852
Translation	MAQQGYQMDSVKFSCSICLDLLKYPVTIPCGHNYCMYCIGSFWDNEDKKGIYSCPQCRQTFTPRPDLVKNTMLAELVEDLKKTGLQAPAADHCYAGPEDVACDICAGRKMKAVNSCLVCLVSYCENHLQPHYDVSALKKHKLVDPSKNLQENICSRHDEVMKIFCRTDQQCICYLCTMDEHKGHETVLAGAERTEKQKKLQERRQQINQRIQDQEKDVKLLQQEVEAINGSADKAVM

Target ORF information:

RefSeq Version	XM_015388803.1
Organism	Cyprinodon variegatus(sheepshead minnow)
Definition	Cyprinodon variegatus tripartite motif-containing protein 47-like (LOC107093623), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015388803.1

ORF Insert Sequence:

ATGGCTCAGC AAGGATATCA GATGGATTCT GTGAAATTCT CCTGTTCGAT CTGCTTGGAT 
CTCCTGAAAT ACCCGGTAAC TATCCCCTGT GGACACAACT ACTGCATGTA CTGTATTGGA 
TCGTTCTGGG ATAATGAGGA CAAGAAAGGG ATCTACAGCT GCCCTCAGTG TAGACAGACG 
TTTACACCGA GGCCTGATTT AGTGAAAAAC ACCATGTTAG CAGAGTTGGT GGAGGATCTG 
AAAAAGACTG GACTCCAGGC TCCTGCAGCT GATCACTGCT ATGCTGGACC TGAAGATGTG 
GCGTGTGATA TCTGCGCTGG GAGGAAGATG AAAGCTGTCA ACTCCTGTCT GGTCTGTTTA 
GTTTCTTACT GCGAGAATCA CCTCCAGCCT CACTATGATG TCTCTGCACT GAAGAAGCAC 
AAGCTGGTTG ACCCCTCCAA GAATCTCCAG GAGAACATCT GCTCTCGTCA TGATGAGGTG 
ATGAAGATCT TCTGTCGTAC TGATCAGCAG TGTATCTGTT ATCTCTGCAC CATGGATGAA 
CATAAAGGCC ATGAAACAGT CCTAGCTGGA GCAGAAAGGA CTGAGAAGCA GAAGAAGCTC 
CAGGAGAGAC GACAACAAAT CAATCAGAGA ATCCAGGACC AGGAGAAAGA TGTGAAGCTG 
CTTCAACAGG AGGTGGAGGC CATCAATGGC TCTGCTGATA AAGCAGTTAT GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.