LOC107086816 cDNA ORF clone, Cyprinodon variegatus(sheepshead minnow)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107086816
Entrez Gene ID	107086816
Full Name	patched domain-containing protein 3-like
Gene Type	protein-coding
Organism	Cyprinodon variegatus(sheepshead minnow)

mRNA and Protein(s)

mRNA	Protein	Name
XM_015378020.1	XP_015233506.1	patched domain-containing protein 3-like

Pathways from BioSystems
Gene Ontology

The following LOC107086816 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107086816 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCy10148	XM_015378020.1 Latest version!	Cyprinodon variegatus patched domain-containing protein 3-like (LOC107086816), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107086816 ( XM_015378020.1 ) cDNA ORF clone, Cyprinodon variegatus(sheepshead minnow) -> XP_015233506.1 Cyprinodon variegatus patched domain-containing protein 3-like (LOC107086816), mRNA.

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CloneID	OCy10148
Clone ID Related Accession (Same CDS sequence)	XM_015378020.1
Accession Version	XM_015378020.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2601bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-13
Organism	Cyprinodon variegatus(sheepshead minnow)
Product	patched domain-containing protein 3-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015150616.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Cyprinodon variegatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 3% of CDS bases ##RefSeq-Attributes-END##

ATGTCAAGAT GCCAAACAGA CTGTGTGGAA AAGCCTCTGC GGATGTGCTT TGAGATGATG 
GGCAGTTTTA TTGGCTCCCA TCCCTGGTGG TTCCTGTTCG CCCCGCTCAT AGTCTCCTCT 
GCTCTGGGAA GTGGCTTTTA TTTCCTCCAG GACGGCATGT CCAATGACAT TGAAGAACAG 
TTTACACCTG CTGATGGACC GGCCAAGATG GAGAGGAAAT ACGTGGAAGA AACCTTTCCA 
AGAAATTGCT CCATGTTCTC AAGTCTTAGG CTGAGCACCG CAGGGAGCTA CGGTACTGTC 
ATAGCAACAA GTGATGGTAA TATTCTAACC ACTGAGTTGC TTCACAACAT CTTAGATTTG 
GACTTGAGAA TCAGGAGCAT GCAGGTGGAG TTTGGCAACC ATTCTTTTGA ATATGGAGAC 
ATCTGTGCCA AAGTGATGGA CTCCTGTGCC TCAAGTGATT TCCTTGATAT AATCGAATAC 
AATGCCAGCA ATGTGGAGTC TGTCAACTTA ACGTTTCCAT GGTATCACAC TGATCGTAAA 
TCTATACCTT TATACCTAAG CCTGGGTAGC GTGGAAGTTC ACACAGAGAC TTCATTTATT 
GAAAGCGCTA AAGCAGTGCA GCTTCATTAC TACTTAGAGG GGAGCAACCA TGCAAAGAAT 
AACCTCTGGC TGGAAAGCTT TATCAGCTTG CTTTCAAACG AGTCATCATC TTCTCTCCAG 
GTTTCATTTT CCACCTCAAA GTCAATGCAG TGGGAATTTG AGAGGTCTCC AGCTTCTGTC 
ATCAATTTAT TCTCCATCAC TTATACCGTT GTCGTCACAT TTTCAATACT AACTTGTTGT 
AGGTCAGACA ATGTGAGGAC AAAGGTTTGG GTGGCCTTCT GTGGAGTTCT CTGCACAGGC 
CTAGCAATTC TGAGTGGGTT TGGCGTGATG CTGTTGCTCG GACAACCCTT TGTCATGACA 
GCTGCATCCT GTCCTTTCAT GATTTTAGGA ATTGGGCTGG ATGACATGTT CATCATGATT 
TCCTGCTGGC AGAGGAGCCG CGTTCTGGAC ACAGTTCCTG ACCGAATGGG TGCGACCTAC 
AGAGATGCGT CTGTGTCTGT CACCATTACC ACCATCACTG ATGCTCTGTC TCTCTTCCTG 
GGCTGCAGCT CGCCGTTTGG CTCCGTCCGA TCCTTCTGTC TCTATGCTGG GATTTGTGTC 
TGCTTCTGTT ATTTGTACAG CATCACCTTC CTTGGCGCGT GCATGGCTCT GAATGGACGG 
AGGGAAGCAG AGAACAGACA CTGGTTCACC TGTGCCACAG TACCAGAGGA CTTTCCAAGC 
GGATCTTCAA AAGCCTTCAG GGCGTGCTGT GTTGGGGGTG GTTACAATCG TACAACTGAG 
AAGGAGGAAA CTGAACCCAT CGATTATTTT CTTCAGCACT TTTTAAGTCC GTGTCTCTCC 
CACAAAGGGT ATAAAGTTTT CGTGTTTTTG TGCTATTCAG GCTATTTGGT TTTAAGCATC 
TATGGCATTC ACCTGCTTAA AGAAGGACTC GACATCAAGA ACCTTGCTTT AGATGACTCC 
TACCTCATAA GATACTACAA TCACCAAGAG CAGCACTTCT CTAAATACGG CTACAATGTG 
ATGGTGGCAG TGAAGCAACC CATCTCTTAC TGGGATGACG ATGACCAGAG GGATCTAAAC 
TCATGCATTT CAGCTTTTAA AAACTTGAAC TTTGTAAACA GCACTCTCGC TTGGTTTACT 
TCTTTCAAAC ATTATGCAGG CACTTCTAAT CTGAATATTA GCTCAAAGGA AACCTTCTTC 
TCCCACTTGG CTAACTTCCT GGAGCTTAAC CCAATGTTTA AACTAGATCT TAATTTGACT 
TCAGGAAAAG CCATTCAGGC TTCTCGTTTT TTTCTTCAAA CATTAACCCA CTCCCCGTTG 
AATGAAATAA TGACTGAATT CAGGAGAACT GCAGAGGACT GTCCCTTTAA GCTGCTGGTT 
TACCACCCTG CCTTTATCTA CTTTGACCAA TACATGTTTA TCTCAAACAG CACCATTCAG 
ACCGTCCTTA TTGCCGTCTC TGCAATGCTG CTTGTCTCTA TCATACTGAT ACCAAACCCC 
CTTTGTTCCA TTTGTGTGGC CTTTGCAATT TGTTCAGTAG TTGTAGGCGT TGTTGGGTTC 
ATGTCACTGT GGGGGGTTAG TTTGGACACC ATTTCCATGA TCAACCTGAT TATGAGCATC 
GGATTCTCTG TGGATTTCTC GGCGCACATT TCATACGCCT TTGTTTCGAG TCCCAAGGGG 
GATGTGGACC AGAAAGCTGC AGAGGCTTTG AGCCACCTGG GGTACCCTAT AATGCAAGGA 
GCGCTGTCCA CCATTCTGGG TGTGGTGGTG TTATCGATGT CTGGGAGCTA CATTTTTAGG 
ACCTTCTTTA AGATTATGTT CCTCGTGATA AGTTTTGGTT TGCTCCATGG CCTTGTGTTC 
ATTCCTGTGT TTCTCACACT GTGGAAGAGA TCTACAGAGA GGAGCCATTC AGAGTGCACA 
CAGCATAAAT GCACTCCTAT ACATTTATAT ACAGGATTCC CAGCACTGAA TCGTACAGTA 
TGTACATGCC AAGCAAAGTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015233506.1
CDS	1..2601
Translation	MSRCQTDCVEKPLRMCFEMMGSFIGSHPWWFLFAPLIVSSALGSGFYFLQDGMSNDIEEQFTPADGPAKMERKYVEETFPRNCSMFSSLRLSTAGSYGTVIATSDGNILTTELLHNILDLDLRIRSMQVEFGNHSFEYGDICAKVMDSCASSDFLDIIEYNASNVESVNLTFPWYHTDRKSIPLYLSLGSVEVHTETSFIESAKAVQLHYYLEGSNHAKNNLWLESFISLLSNESSSSLQVSFSTSKSMQWEFERSPASVINLFSITYTVVVTFSILTCCRSDNVRTKVWVAFCGVLCTGLAILSGFGVMLLLGQPFVMTAASCPFMILGIGLDDMFIMISCWQRSRVLDTVPDRMGATYRDASVSVTITTITDALSLFLGCSSPFGSVRSFCLYAGICVCFCYLYSITFLGACMALNGRREAENRHWFTCATVPEDFPSGSSKAFRACCVGGGYNRTTEKEETEPIDYFLQHFLSPCLSHKGYKVFVFLCYSGYLVLSIYGIHLLKEGLDIKNLALDDSYLIRYYNHQEQHFSKYGYNVMVAVKQPISYWDDDDQRDLNSCISAFKNLNFVNSTLAWFTSFKHYAGTSNLNISSKETFFSHLANFLELNPMFKLDLNLTSGKAIQASRFFLQTLTHSPLNEIMTEFRRTAEDCPFKLLVYHPAFIYFDQYMFISNSTIQTVLIAVSAMLLVSIILIPNPLCSICVAFAICSVVVGVVGFMSLWGVSLDTISMINLIMSIGFSVDFSAHISYAFVSSPKGDVDQKAAEALSHLGYPIMQGALSTILGVVVLSMSGSYIFRTFFKIMFLVISFGLLHGLVFIPVFLTLWKRSTERSHSECTQHKCTPIHLYTGFPALNRTVCTCQAK

Target ORF information:

RefSeq Version	XM_015378020.1
Organism	Cyprinodon variegatus(sheepshead minnow)
Definition	Cyprinodon variegatus patched domain-containing protein 3-like (LOC107086816), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015378020.1

ORF Insert Sequence:

ATGTCAAGAT GCCAAACAGA CTGTGTGGAA AAGCCTCTGC GGATGTGCTT TGAGATGATG 
GGCAGTTTTA TTGGCTCCCA TCCCTGGTGG TTCCTGTTCG CCCCGCTCAT AGTCTCCTCT 
GCTCTGGGAA GTGGCTTTTA TTTCCTCCAG GACGGCATGT CCAATGACAT TGAAGAACAG 
TTTACACCTG CTGATGGACC GGCCAAGATG GAGAGGAAAT ACGTGGAAGA AACCTTTCCA 
AGAAATTGCT CCATGTTCTC AAGTCTTAGG CTGAGCACCG CAGGGAGCTA CGGTACTGTC 
ATAGCAACAA GTGATGGTAA TATTCTAACC ACTGAGTTGC TTCACAACAT CTTAGATTTG 
GACTTGAGAA TCAGGAGCAT GCAGGTGGAG TTTGGCAACC ATTCTTTTGA ATATGGAGAC 
ATCTGTGCCA AAGTGATGGA CTCCTGTGCC TCAAGTGATT TCCTTGATAT AATCGAATAC 
AATGCCAGCA ATGTGGAGTC TGTCAACTTA ACGTTTCCAT GGTATCACAC TGATCGTAAA 
TCTATACCTT TATACCTAAG CCTGGGTAGC GTGGAAGTTC ACACAGAGAC TTCATTTATT 
GAAAGCGCTA AAGCAGTGCA GCTTCATTAC TACTTAGAGG GGAGCAACCA TGCAAAGAAT 
AACCTCTGGC TGGAAAGCTT TATCAGCTTG CTTTCAAACG AGTCATCATC TTCTCTCCAG 
GTTTCATTTT CCACCTCAAA GTCAATGCAG TGGGAATTTG AGAGGTCTCC AGCTTCTGTC 
ATCAATTTAT TCTCCATCAC TTATACCGTT GTCGTCACAT TTTCAATACT AACTTGTTGT 
AGGTCAGACA ATGTGAGGAC AAAGGTTTGG GTGGCCTTCT GTGGAGTTCT CTGCACAGGC 
CTAGCAATTC TGAGTGGGTT TGGCGTGATG CTGTTGCTCG GACAACCCTT TGTCATGACA 
GCTGCATCCT GTCCTTTCAT GATTTTAGGA ATTGGGCTGG ATGACATGTT CATCATGATT 
TCCTGCTGGC AGAGGAGCCG CGTTCTGGAC ACAGTTCCTG ACCGAATGGG TGCGACCTAC 
AGAGATGCGT CTGTGTCTGT CACCATTACC ACCATCACTG ATGCTCTGTC TCTCTTCCTG 
GGCTGCAGCT CGCCGTTTGG CTCCGTCCGA TCCTTCTGTC TCTATGCTGG GATTTGTGTC 
TGCTTCTGTT ATTTGTACAG CATCACCTTC CTTGGCGCGT GCATGGCTCT GAATGGACGG 
AGGGAAGCAG AGAACAGACA CTGGTTCACC TGTGCCACAG TACCAGAGGA CTTTCCAAGC 
GGATCTTCAA AAGCCTTCAG GGCGTGCTGT GTTGGGGGTG GTTACAATCG TACAACTGAG 
AAGGAGGAAA CTGAACCCAT CGATTATTTT CTTCAGCACT TTTTAAGTCC GTGTCTCTCC 
CACAAAGGGT ATAAAGTTTT CGTGTTTTTG TGCTATTCAG GCTATTTGGT TTTAAGCATC 
TATGGCATTC ACCTGCTTAA AGAAGGACTC GACATCAAGA ACCTTGCTTT AGATGACTCC 
TACCTCATAA GATACTACAA TCACCAAGAG CAGCACTTCT CTAAATACGG CTACAATGTG 
ATGGTGGCAG TGAAGCAACC CATCTCTTAC TGGGATGACG ATGACCAGAG GGATCTAAAC 
TCATGCATTT CAGCTTTTAA AAACTTGAAC TTTGTAAACA GCACTCTCGC TTGGTTTACT 
TCTTTCAAAC ATTATGCAGG CACTTCTAAT CTGAATATTA GCTCAAAGGA AACCTTCTTC 
TCCCACTTGG CTAACTTCCT GGAGCTTAAC CCAATGTTTA AACTAGATCT TAATTTGACT 
TCAGGAAAAG CCATTCAGGC TTCTCGTTTT TTTCTTCAAA CATTAACCCA CTCCCCGTTG 
AATGAAATAA TGACTGAATT CAGGAGAACT GCAGAGGACT GTCCCTTTAA GCTGCTGGTT 
TACCACCCTG CCTTTATCTA CTTTGACCAA TACATGTTTA TCTCAAACAG CACCATTCAG 
ACCGTCCTTA TTGCCGTCTC TGCAATGCTG CTTGTCTCTA TCATACTGAT ACCAAACCCC 
CTTTGTTCCA TTTGTGTGGC CTTTGCAATT TGTTCAGTAG TTGTAGGCGT TGTTGGGTTC 
ATGTCACTGT GGGGGGTTAG TTTGGACACC ATTTCCATGA TCAACCTGAT TATGAGCATC 
GGATTCTCTG TGGATTTCTC GGCGCACATT TCATACGCCT TTGTTTCGAG TCCCAAGGGG 
GATGTGGACC AGAAAGCTGC AGAGGCTTTG AGCCACCTGG GGTACCCTAT AATGCAAGGA 
GCGCTGTCCA CCATTCTGGG TGTGGTGGTG TTATCGATGT CTGGGAGCTA CATTTTTAGG 
ACCTTCTTTA AGATTATGTT CCTCGTGATA AGTTTTGGTT TGCTCCATGG CCTTGTGTTC 
ATTCCTGTGT TTCTCACACT GTGGAAGAGA TCTACAGAGA GGAGCCATTC AGAGTGCACA 
CAGCATAAAT GCACTCCTAT ACATTTATAT ACAGGATTCC CAGCACTGAA TCGTACAGTA 
TGTACATGCC AAGCAAAGTA G