DFNB31 cDNA ORF clone, Cuculus canorus(common cuckoo)

Gene
Clones
gRNAs

Summary

Gene Symbol	DFNB31
Entrez Gene ID	104055886
Full Name	whirlin
Gene Type	protein-coding
Organism	Cuculus canorus(common cuckoo)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009557074.1	XP_009555369.1	LOW QUALITY PROTEIN: whirlin

Pathways from BioSystems
Gene Ontology

The following DFNB31 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DFNB31 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCu41420	XM_009557074.1 Latest version!	Cuculus canorus deafness, autosomal recessive 31 (DFNB31), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

DFNB31 ( XM_009557074.1 ) cDNA ORF clone, Cuculus canorus(common cuckoo) -> XP_009555369.1 Cuculus canorus deafness, autosomal recessive 31 (DFNB31), mRNA.

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CloneID	OCu41420
Clone ID Related Accession (Same CDS sequence)	XM_009557074.1
Accession Version	XM_009557074.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2514bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-10-13
Organism	Cuculus canorus(common cuckoo)
Product	LOW QUALITY PROTEIN: whirlin
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_009244322.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Cuculus canorus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 6% of CDS bases frameshifts :: corrected 3 indels ##RefSeq-Attributes-END##

ATGAGCGCTG ATGCTTTTGA TGAGCAGTGT GACCCTGCAG CCCTGGCACT TCTGCAAGAA 
GAGGTGGCTG TATTTGCTGC ATGGGGAGGG GTTCATTGCA GCAAGCTGGG CTTTGACTGC 
GAGATCGACA ACAGCTTCAA CACCCTGACA GGCCCCCTGC GGCGGAGCAA GGCTCACGAG 
GGGCTGGGCT TCAGCATCCG CGGCGGAGCC GAGCACGGAG TCGGGATCTA CGTGTCCCTG 
GTGGAACCGG GCTCGCTGGC TGAGCGAGAG GGGCTGCGAG TCGGGGACCA GATCCTGGGG 
GTCAACGGCA AGTCGTTGGA CAGGGTGACG CACGCTGAAG CTGTCAAGGT ACTGAAAGGC 
TGCAAGAAGC TCAACCTGTC TGTCCACTCG GTGGGACGCA TCCCAGGGGG CTATGTCACC 
AACCACATCT ACACCTGGGT AGACCCGCAG GGCCGGAGCG TGTCCCCACC AACGGGCCTG 
CCACACCACC AGAACAGCTC TCTCCGCAAG GACAGCGAGA AGAGGAGTCA CCTCCAGCTC 
CTGCAAGAGG GAGATGAGAA AAAGGTGAAT CTGGTCCTGA ATGAAGGGAA ATCCCTGGGC 
CTTATGATTC GAGGAGGGGC AGAATATTCC TTGGGCATTT ATATCACCGG TGTGGATAAA 
GGCTCTGAAG CAGAAAGCAC TGGCTTAAAG GTAGGAGACC AAATCCTGGA GGTTAACGGC 
AGGAGCTTCC TCAGCATCCC CCATGACGAG GCAGTGAAGC TGCTCAAGTC TTCCCGACAC 
CTTATCATGA CGGTGAAAGA CATCGGGAGA CTGCCCCACG CCCGCACCAC CGTGGATGAG 
ACCAGGTGGA TAGCAAGCTC CCAGATCGGA GAGACCTTTG TCAACTCAGC AGGGGCAGTG 
GGCAACCATG CTGCGGAGGC GACAGCCAGG CCTGTGTTTT ACCGGGGCCT GGCTGGCTCC 
CAGGTCACGC TCAGCACCAT GGTGAACCAG ACCCGAGTGA TGCTGGAGGA ACAAGCTNTT 
AACGAACAGG AGCGAGCGAC CATGGGGTAC TATCTCGATG AGTATAAGGA AGGCAACATC 
TCCGTGGATG CTCTGGTCAT GGCGCTCTTC GAGCTGCTCA ACACACACGC TAAGTTCTCA 
CTGCTTTCAG AGGTGCGGGG TGTGATCTCC CCGCAAGACC TCGACCGCTT CGACAACCTG 
GTGCTGAAGA GAGAGATTGA GTCCATGAAG GCTCGGCAGC CCTCAGGGCC CAGCATCGGC 
ACCGATTCCT ACTCCATGAT GTCCTACAGC GACACCGTCT CTTCCTCAAG CAGCCACTTC 
ACTGCCACAA CCGTCAGCTC TGCCCGGGAG CGACTCTTGT GGCTAATAGA CCTGATGGAG 
AACACGTCGG AGTTGGAGGG AAGTGGAGAC GGCCACCAAA GTAGCATCAA CACACTGCCG 
GACATCTCCC TGGATGATCT CTCCTCCTTC CCAGATGAAC CACCCAACTT CAAGCCTCCA 
CCTCCTCCTT CAGCCCTTCA GATGCTGGAC CCCTCTTCTG CCCAGCACAG GAACCCAGTA 
AAAGATAAAT CTAAGCGCCC TTCGTCCGAG TCCTCTCAGT CAGGCCTCTT CTTCGTGGCC 
CCTCGAAACC CCACGCCCCC TCCTNNAGCC GTCAGCGTGA CCTCCACCAC CACCACCTCC 
ACAGAAGAAG CTGCCCCAGG TGCTATCTAT GCTACCATTT CCCCAGCCCT GCGCGGCTCC 
AGGAGGCAAA TGGATGCCCA GCTCTCCTTG GTCAACCAGC ACCCCATCGG TCCCTTCCCC 
AGGGTCCAGT CCCCAACGAG GTTGAAGAGC CCAGTCCCAG AGGGTCCCAC GGCCAGTGGG 
CTCCAGAGTC CCCCTTCCCC CTCCCCTCCT CCTCCGCCAT CCCACCCGGC ACCCCCTCCA 
CCAGACAAGG GCAGCCCCCA GGCCGTGGCC AACCAGCATT TCATCATGGT GGAGGTGCAC 
CAACCCAACA GCGAGCCCGA CGTCAATGAA GTGAGGCCGT TGCCCCAGGC TAGAGCCTCC 
ACGCTCTCCC AGCTGTCGGA CAGCGGGCAG ACCCTCAGCG AGGACAGCGG GGTGGACATC 
GGGGAGGTCG AGATGAGCGG CAAGGACAAG AGCCGGCAGC CTGTCCTTGG GAAAAGCCGA 
AGCCTCAAGG AGGCCACGAG GAGCGAGGAG GCAGCAGAAG GGGCCTCCAA GCCGCCGGGG 
CTCCTGGAAC CCACATCGTG TCTGATCCGA GTGTCCAAGA GCGCACCAAC CCTGGGAATC 
GCAATCGAGG GGGGAGCAAA CACACGGCAG CCGCTGCCCC GCATCGTCAC AATCCAGCGC 
GGGGGCTCGG CACACAACTG CGGGAAGCTG AAGGTGGGCC ACGTCATTTT GGAAGTGAAC 
GGCACAGGGC TGCGAGGGAA ATTTTTTNNT TCTCGGATCA TCGCGGAAGC CTTTAAGCTG 
AAGGAAAAGG ACTACATTGA TTTCTTGGTC ACAGAATTCA ACGTCGCCCT TTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009555369.1
CDS	1..2514
Translation	MSADAFDEQCDPAALALLQEEVAVFAAWGGVHCSKLGFDCEIDNSFNTLTGPLRRSKAHEGLGFSIRGGAEHGVGIYVSLVEPGSLAEREGLRVGDQILGVNGKSLDRVTHAEAVKVLKGCKKLNLSVHSVGRIPGGYVTNHIYTWVDPQGRSVSPPTGLPHHQNSSLRKDSEKRSHLQLLQEGDEKKVNLVLNEGKSLGLMIRGGAEYSLGIYITGVDKGSEAESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLIMTVKDIGRLPHARTTVDETRWIASSQIGETFVNSAGAVGNHAAEATARPVFYRGLAGSQVTLSTMVNQTRVMLEEQAnullNEQERATMGYYLDEYKEGNISVDALVMALFELLNTHAKFSLLSEVRGVISPQDLDRFDNLVLKREIESMKARQPSGPSIGTDSYSMMSYSDTVSSSSSHFTATTVSSARERLLWLIDLMENTSELEGSGDGHQSSINTLPDISLDDLSSFPDEPPNFKPPPPPSALQMLDPSSAQHRNPVKDKSKRPSSESSQSGLFFVAPRNPTPPPnullAVSVTSTTTTSTEEAAPGAIYATISPALRGSRRQMDAQLSLVNQHPIGPFPRVQSPTRLKSPVPEGPTASGLQSPPSPSPPPPPSHPAPPPPDKGSPQAVANQHFIMVEVHQPNSEPDVNEVRPLPQARASTLSQLSDSGQTLSEDSGVDIGEVEMSGKDKSRQPVLGKSRSLKEATRSEEAAEGASKPPGLLEPTSCLIRVSKSAPTLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGKLKVGHVILEVNGTGLRGKFFnullSRIIAEAFKLKEKDYIDFLVTEFNVAL

Target ORF information:

RefSeq Version	XM_009557074.1
Organism	Cuculus canorus(common cuckoo)
Definition	Cuculus canorus deafness, autosomal recessive 31 (DFNB31), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009557074.1

ORF Insert Sequence:

ATGAGCGCTG ATGCTTTTGA TGAGCAGTGT GACCCTGCAG CCCTGGCACT TCTGCAAGAA 
GAGGTGGCTG TATTTGCTGC ATGGGGAGGG GTTCATTGCA GCAAGCTGGG CTTTGACTGC 
GAGATCGACA ACAGCTTCAA CACCCTGACA GGCCCCCTGC GGCGGAGCAA GGCTCACGAG 
GGGCTGGGCT TCAGCATCCG CGGCGGAGCC GAGCACGGAG TCGGGATCTA CGTGTCCCTG 
GTGGAACCGG GCTCGCTGGC TGAGCGAGAG GGGCTGCGAG TCGGGGACCA GATCCTGGGG 
GTCAACGGCA AGTCGTTGGA CAGGGTGACG CACGCTGAAG CTGTCAAGGT ACTGAAAGGC 
TGCAAGAAGC TCAACCTGTC TGTCCACTCG GTGGGACGCA TCCCAGGGGG CTATGTCACC 
AACCACATCT ACACCTGGGT AGACCCGCAG GGCCGGAGCG TGTCCCCACC AACGGGCCTG 
CCACACCACC AGAACAGCTC TCTCCGCAAG GACAGCGAGA AGAGGAGTCA CCTCCAGCTC 
CTGCAAGAGG GAGATGAGAA AAAGGTGAAT CTGGTCCTGA ATGAAGGGAA ATCCCTGGGC 
CTTATGATTC GAGGAGGGGC AGAATATTCC TTGGGCATTT ATATCACCGG TGTGGATAAA 
GGCTCTGAAG CAGAAAGCAC TGGCTTAAAG GTAGGAGACC AAATCCTGGA GGTTAACGGC 
AGGAGCTTCC TCAGCATCCC CCATGACGAG GCAGTGAAGC TGCTCAAGTC TTCCCGACAC 
CTTATCATGA CGGTGAAAGA CATCGGGAGA CTGCCCCACG CCCGCACCAC CGTGGATGAG 
ACCAGGTGGA TAGCAAGCTC CCAGATCGGA GAGACCTTTG TCAACTCAGC AGGGGCAGTG 
GGCAACCATG CTGCGGAGGC GACAGCCAGG CCTGTGTTTT ACCGGGGCCT GGCTGGCTCC 
CAGGTCACGC TCAGCACCAT GGTGAACCAG ACCCGAGTGA TGCTGGAGGA ACAAGCTNTT 
AACGAACAGG AGCGAGCGAC CATGGGGTAC TATCTCGATG AGTATAAGGA AGGCAACATC 
TCCGTGGATG CTCTGGTCAT GGCGCTCTTC GAGCTGCTCA ACACACACGC TAAGTTCTCA 
CTGCTTTCAG AGGTGCGGGG TGTGATCTCC CCGCAAGACC TCGACCGCTT CGACAACCTG 
GTGCTGAAGA GAGAGATTGA GTCCATGAAG GCTCGGCAGC CCTCAGGGCC CAGCATCGGC 
ACCGATTCCT ACTCCATGAT GTCCTACAGC GACACCGTCT CTTCCTCAAG CAGCCACTTC 
ACTGCCACAA CCGTCAGCTC TGCCCGGGAG CGACTCTTGT GGCTAATAGA CCTGATGGAG 
AACACGTCGG AGTTGGAGGG AAGTGGAGAC GGCCACCAAA GTAGCATCAA CACACTGCCG 
GACATCTCCC TGGATGATCT CTCCTCCTTC CCAGATGAAC CACCCAACTT CAAGCCTCCA 
CCTCCTCCTT CAGCCCTTCA GATGCTGGAC CCCTCTTCTG CCCAGCACAG GAACCCAGTA 
AAAGATAAAT CTAAGCGCCC TTCGTCCGAG TCCTCTCAGT CAGGCCTCTT CTTCGTGGCC 
CCTCGAAACC CCACGCCCCC TCCTNNAGCC GTCAGCGTGA CCTCCACCAC CACCACCTCC 
ACAGAAGAAG CTGCCCCAGG TGCTATCTAT GCTACCATTT CCCCAGCCCT GCGCGGCTCC 
AGGAGGCAAA TGGATGCCCA GCTCTCCTTG GTCAACCAGC ACCCCATCGG TCCCTTCCCC 
AGGGTCCAGT CCCCAACGAG GTTGAAGAGC CCAGTCCCAG AGGGTCCCAC GGCCAGTGGG 
CTCCAGAGTC CCCCTTCCCC CTCCCCTCCT CCTCCGCCAT CCCACCCGGC ACCCCCTCCA 
CCAGACAAGG GCAGCCCCCA GGCCGTGGCC AACCAGCATT TCATCATGGT GGAGGTGCAC 
CAACCCAACA GCGAGCCCGA CGTCAATGAA GTGAGGCCGT TGCCCCAGGC TAGAGCCTCC 
ACGCTCTCCC AGCTGTCGGA CAGCGGGCAG ACCCTCAGCG AGGACAGCGG GGTGGACATC 
GGGGAGGTCG AGATGAGCGG CAAGGACAAG AGCCGGCAGC CTGTCCTTGG GAAAAGCCGA 
AGCCTCAAGG AGGCCACGAG GAGCGAGGAG GCAGCAGAAG GGGCCTCCAA GCCGCCGGGG 
CTCCTGGAAC CCACATCGTG TCTGATCCGA GTGTCCAAGA GCGCACCAAC CCTGGGAATC 
GCAATCGAGG GGGGAGCAAA CACACGGCAG CCGCTGCCCC GCATCGTCAC AATCCAGCGC 
GGGGGCTCGG CACACAACTG CGGGAAGCTG AAGGTGGGCC ACGTCATTTT GGAAGTGAAC 
GGCACAGGGC TGCGAGGGAA ATTTTTTNNT TCTCGGATCA TCGCGGAAGC CTTTAAGCTG 
AAGGAAAAGG ACTACATTGA TTTCTTGGTC ACAGAATTCA ACGTCGCCCT TTAG