LOC105322492 cDNA ORF clone, Crassostrea gigas(Pacific oyster)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105322492
Entrez Gene ID	105322492
Full Name	integrin beta-1-B-like
Synonyms	IBCGH
Gene Type	protein-coding
Organism	Crassostrea gigas(Pacific oyster)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001305380.1	NP_001292309.1	integrin beta-1-B-like precursor

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Differences in integrin-dependent phagocytosis among three hemocyte subpopulations of the Pacific oyster "Crassostrea gigas".
Terahara K, Takahashi KG, Nakamura A, Osada M, Yoda M, Hiroi T, Hirasawa M, Mori K
Developmental and comparative immunology30(8)667-83(2006)

Pacific oyster hemocytes undergo apoptosis following cell-adhesion mediated by integrin-like molecules.
Terahara K, Takahashi KG, Mori K
Comparative biochemistry and physiology. Part A, Molecular & integrative physiology141(2)215-22(2005 Jun)

Apoptosis by RGD-containing peptides observed in hemocytes of the Pacific oyster, Crassostrea gigas.
Terahara K, Takahashi KG, Mori K
Developmental and comparative immunology27(6-7)521-8(2003 Jun-Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC105322492 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105322492 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCr05881	NM_001305380.1 Latest version!	Crassostrea gigas integrin beta-1-B-like (LOC105322492), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105322492 ( NM_001305380.1 ) cDNA ORF clone, Crassostrea gigas(Pacific oyster) -> NP_001292309.1 Crassostrea gigas integrin beta-1-B-like (LOC105322492), mRNA.

Price & Availability↑

CloneID	OCr05881
Clone ID Related Accession (Same CDS sequence)	NM_001305380.1
Accession Version	NM_001305380.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2400bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-05-04
Organism	Crassostrea gigas(Pacific oyster)
Product	integrin beta-1-B-like precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB066348.1. ##Evidence-Data-START## Transcript exon combination :: AB066348.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00714285, SAMN00714286 [ECO:0000350] ##Evidence-Data-END##

ATGGTATCGA CGGTTTGGTT TTTATGTTTT ACAACAATTT TCTGTTCCCT AAATCCTATC 
GGGAAATTGA GTGCACAAGA TTTACGATCT GATACTTTGA CGCCTACACA GGAAAACCCG 
TGCCTGAAGG AAAAGACCAC AACATGTGGG GAGTGTATAG CAATATCTAC CCTGTGTGCA 
TTCTGTACCG ACGCTGAGTA TGACGCCAAC AATTATCCCA GGTGTGACCT ACTGACCACT 
CATCAGAAAC TCATCAACAA CAAGCCCAGG TGTAAAGACA TCGTCAATCC GTCATCAACC 
CTCGTAAAGA GCAGGGATGA CAGATTGATT GATGGCGATA GGGACAGATA TGCCGTACAG 
ATCAGACCCC AGCAAATCGA CCTGGAGTTA CGTCCAAATG ACCCTCAGAC ATTTAATCTG 
ACGTTCCGAT TGGCTGAGAA CTATCCAGTC GACCTCTACT ACCTTATGGA CCTCTCAAAC 
TCAATGGCAG ACGACAAAGA AAAACTGGCC AGCCTTGGAG TCAAGATAGC TGAAGACATG 
AGCACCATCA CTAAGAACTT CAAGCTGGGT TTTGGTTCCT TTGTGGACAA GGTTGTCATG 
CCCTACGTCA GTACAGCCCC TAATAAAATT AACAGTCCTT GTCCAGGATG TGAGAAGGCT 
TATGGATTTA GAAACGTTCA CCCATTGGAC CCAAATGCTA CACTGTTCAG GGACAAAGTC 
AATGCAGCCA AGGTATCTGG TAACCTTGAT GCTCCGGAGG GTGGGTTCGA CGCCATCATG 
CAGGCCATAG CTTGTGAGAC AGAGATTGGG TGGAGGAACC GATCCAGAAG AATGTTGCTG 
TTCTCCACAG ACGCTGGATT TCATTACGCT GGGGACGGAG AACTTGGAGG CATCATTCAA 
CCCAATGATG GAAACTGTCA TCTTAGTCCT GACGGAATGT ACACAGAAAG TTCTAATCAG 
GACTACCCCT CTATTAGTCA AGTCGCGGTG AAAGCCAAGG AAAAGAATGT CAACATCATT 
TTCGCCGTCA CCAACGATCA AAAGAACATT TATGATCAGC TCAAGCCAAT CATTGCGGGA 
TCGGAAACAG GAGTTTTGGC GTCAGACTCA CAGAACGTTG TCAAGCTAGT CAGAGACAAC 
TACTTGGCCA TCACATCAAA AGTAGAAATG ATTGTTGAAA ACTCAGACAA TTTGGAGGTG 
AAATTCAGGA CAAAATGTAA AGGAACTGAA GAGAAAGAGA CAAACAAGTG TGAGAACTTG 
GCCATTGGAG GATCTGTGGA TTTCAGTGTG ACAGTGGAAG TGAAGAGCTG CCCCCCCAAA 
GGTGAAGAGG AGAGGACCCT CAGGATCAAA CCAGTCGGAC TGTATGATGA TTTGACTGTC 
AAACTGAAGC TCATGTGTCA GTGTGACTGC GAGTCCCCAA AGCAAATGGA AGACAACAAG 
AACCACGAGA AATGTAATGG AAACGGGACG TACGTGTGTG GAATGTGCGT GTGTAACGAG 
CCGTACTTTG GAGACTATTG TGACTGTGAC AAGGGCACCG GGACCATCGC TGACAAGGAG 
TCGGAGTGTA TCCAGGACAA GAACACGACC ATCATCTGTA ACGGCCGGGG AGAATGTAAC 
TGCGGAACGT GCACGTGTCG GGAGAGACAG AAGGGCACCA ACCACTTCTA CACGGGCAGA 
TACTGCGAGT GTGACGATTA CAGCTGTCCC TACTACGCTG GGCTGATCTG TGGAGGTCTG 
GGTCGCGGAC AGTGTGACTG TGGAAACTGT AAGTGTAACG CCGGTTTCAA TGGCACGAAC 
TGCGGATGTA ACACCGACAA CTCTACCTGT ATGTACAATG GATTGCTGTG TAATGATAAA 
GGAACTTGTG AGTGTGGCAA GTGTACCTGT ACTGATCCTA AGTACTTTGG ACCCCAGTGT 
CAGGAATGTG ATAACTGTGG CCAGGAGCAA TGTCGTACCC ACCAGGACTG TGCGCTGTGT 
AACAGAACCA ATGCCGGGGT ACTGACCAAG GAACAGTGTG AAAAAGAGTG CTCCCATACC 
ACTGCCGTCG ACAAAATCAG AAATGGCATC ACTAATTGCG AGTACGTAGA CCAGAACGGC 
TGCTTTATTT ACTTTACCTA TTTCTATGAC GATGATGGCA CACTGAGGGT AGAAGTCCAA 
AAAGAGCCAG AGTGTCCCCC CGAGGTCAAC GTCCTTGCCA TAGTCCTGGG GGTGATAGCG 
GGCATCGTGT TCTTTGGGAT CATCCTCCTC CTGATCTGGA AACTATTCAC CACCATTAGT 
GATAAGAGAG AGCTGGCCAG GTTCGAAAAG GAGGCCATGA ACGCCCGATG GGATACGGGA 
GAAAATCCTA TCTACAAGCA GGCTACATCC ACCTTTGTCA ACCCCACCTA CAGGCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001292309.1
CDS	76..2475
Translation	MVSTVWFLCFTTIFCSLNPIGKLSAQDLRSDTLTPTQENPCLKEKTTTCGECIAISTLCAFCTDAEYDANNYPRCDLLTTHQKLINNKPRCKDIVNPSSTLVKSRDDRLIDGDRDRYAVQIRPQQIDLELRPNDPQTFNLTFRLAENYPVDLYYLMDLSNSMADDKEKLASLGVKIAEDMSTITKNFKLGFGSFVDKVVMPYVSTAPNKINSPCPGCEKAYGFRNVHPLDPNATLFRDKVNAAKVSGNLDAPEGGFDAIMQAIACETEIGWRNRSRRMLLFSTDAGFHYAGDGELGGIIQPNDGNCHLSPDGMYTESSNQDYPSISQVAVKAKEKNVNIIFAVTNDQKNIYDQLKPIIAGSETGVLASDSQNVVKLVRDNYLAITSKVEMIVENSDNLEVKFRTKCKGTEEKETNKCENLAIGGSVDFSVTVEVKSCPPKGEEERTLRIKPVGLYDDLTVKLKLMCQCDCESPKQMEDNKNHEKCNGNGTYVCGMCVCNEPYFGDYCDCDKGTGTIADKESECIQDKNTTIICNGRGECNCGTCTCRERQKGTNHFYTGRYCECDDYSCPYYAGLICGGLGRGQCDCGNCKCNAGFNGTNCGCNTDNSTCMYNGLLCNDKGTCECGKCTCTDPKYFGPQCQECDNCGQEQCRTHQDCALCNRTNAGVLTKEQCEKECSHTTAVDKIRNGITNCEYVDQNGCFIYFTYFYDDDGTLRVEVQKEPECPPEVNVLAIVLGVIAGIVFFGIILLLIWKLFTTISDKRELARFEKEAMNARWDTGENPIYKQATSTFVNPTYRQ

Target ORF information:

RefSeq Version	NM_001305380.1
Organism	Crassostrea gigas(Pacific oyster)
Definition	Crassostrea gigas integrin beta-1-B-like (LOC105322492), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001305380.1

ORF Insert Sequence:

ATGGTATCGA CGGTTTGGTT TTTATGTTTT ACAACAATTT TCTGTTCCCT AAATCCTATC 
GGGAAATTGA GTGCACAAGA TTTACGATCT GATACTTTGA CGCCTACACA GGAAAACCCG 
TGCCTGAAGG AAAAGACCAC AACATGTGGG GAGTGTATAG CAATATCTAC CCTGTGTGCA 
TTCTGTACCG ACGCTGAGTA TGACGCCAAC AATTATCCCA GGTGTGACCT ACTGACCACT 
CATCAGAAAC TCATCAACAA CAAGCCCAGG TGTAAAGACA TCGTCAATCC GTCATCAACC 
CTCGTAAAGA GCAGGGATGA CAGATTGATT GATGGCGATA GGGACAGATA TGCCGTACAG 
ATCAGACCCC AGCAAATCGA CCTGGAGTTA CGTCCAAATG ACCCTCAGAC ATTTAATCTG 
ACGTTCCGAT TGGCTGAGAA CTATCCAGTC GACCTCTACT ACCTTATGGA CCTCTCAAAC 
TCAATGGCAG ACGACAAAGA AAAACTGGCC AGCCTTGGAG TCAAGATAGC TGAAGACATG 
AGCACCATCA CTAAGAACTT CAAGCTGGGT TTTGGTTCCT TTGTGGACAA GGTTGTCATG 
CCCTACGTCA GTACAGCCCC TAATAAAATT AACAGTCCTT GTCCAGGATG TGAGAAGGCT 
TATGGATTTA GAAACGTTCA CCCATTGGAC CCAAATGCTA CACTGTTCAG GGACAAAGTC 
AATGCAGCCA AGGTATCTGG TAACCTTGAT GCTCCGGAGG GTGGGTTCGA CGCCATCATG 
CAGGCCATAG CTTGTGAGAC AGAGATTGGG TGGAGGAACC GATCCAGAAG AATGTTGCTG 
TTCTCCACAG ACGCTGGATT TCATTACGCT GGGGACGGAG AACTTGGAGG CATCATTCAA 
CCCAATGATG GAAACTGTCA TCTTAGTCCT GACGGAATGT ACACAGAAAG TTCTAATCAG 
GACTACCCCT CTATTAGTCA AGTCGCGGTG AAAGCCAAGG AAAAGAATGT CAACATCATT 
TTCGCCGTCA CCAACGATCA AAAGAACATT TATGATCAGC TCAAGCCAAT CATTGCGGGA 
TCGGAAACAG GAGTTTTGGC GTCAGACTCA CAGAACGTTG TCAAGCTAGT CAGAGACAAC 
TACTTGGCCA TCACATCAAA AGTAGAAATG ATTGTTGAAA ACTCAGACAA TTTGGAGGTG 
AAATTCAGGA CAAAATGTAA AGGAACTGAA GAGAAAGAGA CAAACAAGTG TGAGAACTTG 
GCCATTGGAG GATCTGTGGA TTTCAGTGTG ACAGTGGAAG TGAAGAGCTG CCCCCCCAAA 
GGTGAAGAGG AGAGGACCCT CAGGATCAAA CCAGTCGGAC TGTATGATGA TTTGACTGTC 
AAACTGAAGC TCATGTGTCA GTGTGACTGC GAGTCCCCAA AGCAAATGGA AGACAACAAG 
AACCACGAGA AATGTAATGG AAACGGGACG TACGTGTGTG GAATGTGCGT GTGTAACGAG 
CCGTACTTTG GAGACTATTG TGACTGTGAC AAGGGCACCG GGACCATCGC TGACAAGGAG 
TCGGAGTGTA TCCAGGACAA GAACACGACC ATCATCTGTA ACGGCCGGGG AGAATGTAAC 
TGCGGAACGT GCACGTGTCG GGAGAGACAG AAGGGCACCA ACCACTTCTA CACGGGCAGA 
TACTGCGAGT GTGACGATTA CAGCTGTCCC TACTACGCTG GGCTGATCTG TGGAGGTCTG 
GGTCGCGGAC AGTGTGACTG TGGAAACTGT AAGTGTAACG CCGGTTTCAA TGGCACGAAC 
TGCGGATGTA ACACCGACAA CTCTACCTGT ATGTACAATG GATTGCTGTG TAATGATAAA 
GGAACTTGTG AGTGTGGCAA GTGTACCTGT ACTGATCCTA AGTACTTTGG ACCCCAGTGT 
CAGGAATGTG ATAACTGTGG CCAGGAGCAA TGTCGTACCC ACCAGGACTG TGCGCTGTGT 
AACAGAACCA ATGCCGGGGT ACTGACCAAG GAACAGTGTG AAAAAGAGTG CTCCCATACC 
ACTGCCGTCG ACAAAATCAG AAATGGCATC ACTAATTGCG AGTACGTAGA CCAGAACGGC 
TGCTTTATTT ACTTTACCTA TTTCTATGAC GATGATGGCA CACTGAGGGT AGAAGTCCAA 
AAAGAGCCAG AGTGTCCCCC CGAGGTCAAC GTCCTTGCCA TAGTCCTGGG GGTGATAGCG 
GGCATCGTGT TCTTTGGGAT CATCCTCCTC CTGATCTGGA AACTATTCAC CACCATTAGT 
GATAAGAGAG AGCTGGCCAG GTTCGAAAAG GAGGCCATGA ACGCCCGATG GGATACGGGA 
GAAAATCCTA TCTACAAGCA GGCTACATCC ACCTTTGTCA ACCCCACCTA CAGGCAGTGA