LOC105909486 cDNA ORF clone, Clupea harengus(Atlantic herring)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105909486
Entrez Gene ID	105909486
Full Name	NACHT, LRR and PYD domains-containing protein 3-like
Gene Type	protein-coding
Organism	Clupea harengus(Atlantic herring)

mRNA and Protein(s)

mRNA	Protein	Name
XM_012838122.1	XP_012693576.1	NACHT, LRR and PYD domains-containing protein 3-like

Pathways from BioSystems
Gene Ontology

The following LOC105909486 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105909486 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCl98484	XM_012838122.1 Latest version!	Clupea harengus NACHT, LRR and PYD domains-containing protein 3-like (LOC105909486), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$713.30 $1019.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105909486 ( XM_012838122.1 ) cDNA ORF clone, Clupea harengus(Atlantic herring) -> XP_012693576.1 Clupea harengus NACHT, LRR and PYD domains-containing protein 3-like (LOC105909486), mRNA.

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CloneID	OCl98484
Clone ID Related Accession (Same CDS sequence)	XM_012838122.1
Accession Version	XM_012838122.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3531bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-06-11
Organism	Clupea harengus(Atlantic herring)
Product	NACHT, LRR and PYD domains-containing protein 3-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012223274.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Clupea harengus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 58% of CDS bases ##RefSeq-Attributes-END##

ATGGCTAACC GAGCAACAGG AGTTCCAGCA CCCCAGCTTT TATTCGATGG GTCTGAGGAG 
AAATTTGACC TTTGGGAAAC GCGGCTCCTA GGATGCTTAC ACATTCTGAA GTTAAAGGAG 
ACTATCTTAC GAGAACCAGA TGAAGCAAGC GATGAAGACA GAAGGAAGAA TGCCGACTGC 
TATGCCGAGC TGGTCTGCTT TCTTTTTGAA GCCTTGACAG GAGAGGACCC AGAAGAGGCT 
GCAAGTGGCT TCTCTCCTGA AGCGAGGCAG GATCCCCCAG CTGAGCATCA GAGCAGTTTG 
AGGAGGAGCT GCCAATCATG TTCAGACTCC ACCCACTGGG ATCTGAAGGT GCCCTCCATC 
TCCATGGAGA CAGGGGTGTC GGTGTACAAC CTCAGCTCTC AGGCAGGGAG TTATGAGTGT 
ACAGTGTCGG GTTTGCGCTG GGTGTGTGGT GGTGACGTCA CCCTGCAATA TCACTTCAGC 
ACTGAGGAGC TGTCCTCTGC CCAGCTAGAT ACAGAGATAC AGATACAGTT ACACTACATC 
AGTCCCTTGA TGGACATCAA GGTTATCTCA GGTGAACTGG ACGAGATCCA TCTGCCCCAC 
TCCCTCTGTT TGGGAGATTC TGACAAACAA ACAACAAACA AGGCTGACTG CAGTCACCAT 
TCTAAGTTAA GGGATGCAGT GAGAGTTCTG CATTGGGATG ACAGCGGGGT TTCCCTGGAG 
ACGTGCGAGC TGATGCGCTT CCATGCCAGG CTTGTCAAGC CCCGCTTCCA TGCCAGGCTT 
GTCAAGCCCC GCTTCTCTCT GTGGCAGTTA GTTCTTAGTC TGGGCGTCCC TGTAATGACC 
CACTGTGAGG TGTTGATCTA TCAGTCCTAC GCAGAACCCC TCATTCTGAA CACATATGTT 
GTGCCGAACA CATCCACAGC GAAGAACGCC ATAGAGGAGG AATGGAAAAG CCGTGGTGGC 
ATCTACATCA AGAAGGAACC ACTCATAACA TCTATCCGAA TGAATTCAAA CTTCAAGTTA 
TCCACTTCCT GCCTGTCTAC AATCATACCA GAGGAGATCA GTCTAACTTA TAACACTTCT 
CCAGCCTACT TTGAAGTGTG CATTAAAAAG CCAGACGACG AATTTGAAAT GGAGCTGATG 
GTTGCAGAGG TTAGACCGAT ATGGAAAGCT GCTATTCGAA AGGGAGCCGA CTACAAGACG 
GCCATGCCAA CACTTTTCCT TCCCACAGCC TTGACAGGAG AGGACCCAGA AGAGGCTGCA 
AGTGGCTTCC CTCCTGAAGC TAAGTATGCG AAAATTGTAG CTCAGGGTGG AAGCCATATC 
TCAGTTCCAA CTGTGACCGG CAATACAGTT CAGGGAAACA TCAGCATCAA CTCAAACATT 
CATCATCATT ATCATGATCA TACCTCAAAA ATACATGAAT ACAAGACATC CATCTGCTCC 
ACATATGAAA ATGTTAAGGA GTATAACTCT GGACCTGGTG AGAATGTGCT GCTGGCTGAC 
CGCTACACTG ACCTGCTGAT CGTTGAGACA CACAGAAAGC AGAGAGAAAG AGAGGAGGAG 
ATCTGTTTTA GAGGAAAACA TCACCAGCAG GTCTTAAAAA CCAGGGCCAG TGAAGCATAC 
AGCAGAATCA CTGTTGACCA GTTGTTTAAA CCCAATGGCG TTGGAGATGT TCCAAAGGCA 
GTCATTCTCC AGGGCCACTC TGGACATGGC AAATCCTTTA CTGTTCAGAA GATAATGTGC 
GACTGGGCCT CAGGAAAAGT ATTCAAAGAC TTGTTCCACC TTGTTCTTCA CCTTAAATGC 
AAAGAGCTTA ATGATATCCC AGAGGCACAC AGTCTGGTGG ATCTCCTGAG CTACTGTCCA 
AGCTTCACCA GTGAGACAGC AGAGGTGCTG AAGGACTCAA AAATGAAAGT GCTCTTCCTC 
ATTGATGGCT TTGATGAGCT CAAGTTCTCA TTTGAGAAAA CTAGCACAGT GCCACCTAAA 
GACCCTTTCA GAGAAGCTCC TGTTGAGGCC ACTCTGAGTG CTCTGCTGAA GGGGCTTGTC 
CTGCCTAAGT GCTTCCTGCT GGTCACCACC AGGTCCACTG CTTCAGACAA ACTGAGCAAG 
CTGCTCAGTG ATTCTCAGCG TTTCACTGAC ATCCTAGGCT TCACTGAGGA GGGGGTGAAG 
GAGTACTTCC AGAGGTTTTT CAAAGAAGAG CTGCTAGCAA AGAAAGCATT CGACTGTGTG 
AGGACCAACG AGACTTTGTA TACTGCCTGC TCCATCCCCG TCATCTGCTG GATCATCTGC 
ACAGTTTTCA GGGAGCAAGA AGAAGAAGGC CTGGACATCA ATAAGGAACT AGAAACAACC 
ACCTCTATAT TTGTGCACTT TGTGTCCATT CTACTGAAGC ATCACTGCCA GGGTTTGAGT 
CAGCCTGAAA CTCTGCTGAG GAGCCTGGGA CAGCTGGCAG AGAGAGGGTT ACAGGAACAT 
CAGGTCCTGT TTGATGAGAA GACTTTGTCT GAGGCTTTCC CTGATCCATC ACAAGCAACA 
AAATACAATC CTTTCCTCTG CAAATTCTTG CAAAGGAAGA AAGTCAAACA GGAAAGAATG 
TACAGTTTCA TGCATATGAG CTTCCAGGAG TTCTTCGCTG CTCTCCAGTA CCTGATGTTG 
GAGAATGAGG AAGAGGCACT TACAAAACTA CAGAAGTTGT TAGGAGACGT TAACCGTTTT 
AAACCTGTTA TTCAATTCCT TTTTGGGCTT TCAAACAGAG ACATCCCCTC ACACCTGAAA 
ACGCAATGCT GGCCATCCAT TAAAGCTCAT CTGCAGAAGT GGCTTCTAAG GGTTTTGCAA 
AATGACGAAA TGCATCAAGG GGATATGCTG CATATACTCC ATTGTCTCTA TGAGCTCCAT 
GAGGAGGAGT TCGTAAGGGA GGCCATGGGA GTCTGGGGTG AGGTGAAGTT TCACTCCATT 
CCCCTGACGA GGACAGACTG CTGGGTGCTG CTGTACTGCC TGCAGTGTTG CCCGACCATC 
AGAAGACTGG CGCTCCATTA CTGCAACATA ACAGCAGAGA AGCTGATGCT GCTGCAGCCT 
GCACTGAGCA GGTGTGAGGA GCTGGGGTTA TTTGTGGAGG GCCTGTCAGA TGCTGATGTT 
GTTGACCTGA TCTCAGCTCT GGGGGAGGGG AACATCCTGA CTGAAATGAG GTTAACTGTG 
GAGAGTATGT CAGATGCTGA TGTTTTTGAC CTGATCTCAG CTCTGGTGGC GGGAAAGATC 
CTGACTGAAT TGAGGCTGGG TGTGAGTTCA CTATTGTGTT CCACAATGTC ACCTGCTTCA 
CTTACCCTGT CACACGCAGA CAACCCAACC GGCAGCAGCT TTACCAACTT CATCCACAAT 
CCACATAGGA CTCAGGGTGG CTGTATAGGT GTTCTTGAGT CCTTCACTGA CTGGTCTACT 
CTGCCTGGTC TGGAGAAGGT GGAGTTAATG ATGCCCTACC TGACTGAGAA CTGGGCCCAC 
TGGATCCTCA ACCTCATCCA CATGTGCCCC ACTCTGAAGG AAGTAAAGTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012693576.1
CDS	1..3531
Translation	MANRATGVPAPQLLFDGSEEKFDLWETRLLGCLHILKLKETILREPDEASDEDRRKNADCYAELVCFLFEALTGEDPEEAASGFSPEARQDPPAEHQSSLRRSCQSCSDSTHWDLKVPSISMETGVSVYNLSSQAGSYECTVSGLRWVCGGDVTLQYHFSTEELSSAQLDTEIQIQLHYISPLMDIKVISGELDEIHLPHSLCLGDSDKQTTNKADCSHHSKLRDAVRVLHWDDSGVSLETCELMRFHARLVKPRFHARLVKPRFSLWQLVLSLGVPVMTHCEVLIYQSYAEPLILNTYVVPNTSTAKNAIEEEWKSRGGIYIKKEPLITSIRMNSNFKLSTSCLSTIIPEEISLTYNTSPAYFEVCIKKPDDEFEMELMVAEVRPIWKAAIRKGADYKTAMPTLFLPTALTGEDPEEAASGFPPEAKYAKIVAQGGSHISVPTVTGNTVQGNISINSNIHHHYHDHTSKIHEYKTSICSTYENVKEYNSGPGENVLLADRYTDLLIVETHRKQREREEEICFRGKHHQQVLKTRASEAYSRITVDQLFKPNGVGDVPKAVILQGHSGHGKSFTVQKIMCDWASGKVFKDLFHLVLHLKCKELNDIPEAHSLVDLLSYCPSFTSETAEVLKDSKMKVLFLIDGFDELKFSFEKTSTVPPKDPFREAPVEATLSALLKGLVLPKCFLLVTTRSTASDKLSKLLSDSQRFTDILGFTEEGVKEYFQRFFKEELLAKKAFDCVRTNETLYTACSIPVICWIICTVFREQEEEGLDINKELETTTSIFVHFVSILLKHHCQGLSQPETLLRSLGQLAERGLQEHQVLFDEKTLSEAFPDPSQATKYNPFLCKFLQRKKVKQERMYSFMHMSFQEFFAALQYLMLENEEEALTKLQKLLGDVNRFKPVIQFLFGLSNRDIPSHLKTQCWPSIKAHLQKWLLRVLQNDEMHQGDMLHILHCLYELHEEEFVREAMGVWGEVKFHSIPLTRTDCWVLLYCLQCCPTIRRLALHYCNITAEKLMLLQPALSRCEELGLFVEGLSDADVVDLISALGEGNILTEMRLTVESMSDADVFDLISALVAGKILTELRLGVSSLLCSTMSPASLTLSHADNPTGSSFTNFIHNPHRTQGGCIGVLESFTDWSTLPGLEKVELMMPYLTENWAHWILNLIHMCPTLKEVK

Target ORF information:

RefSeq Version	XM_012838122.1
Organism	Clupea harengus(Atlantic herring)
Definition	Clupea harengus NACHT, LRR and PYD domains-containing protein 3-like (LOC105909486), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012838122.1

ORF Insert Sequence:

ATGGCTAACC GAGCAACAGG AGTTCCAGCA CCCCAGCTTT TATTCGATGG GTCTGAGGAG 
AAATTTGACC TTTGGGAAAC GCGGCTCCTA GGATGCTTAC ACATTCTGAA GTTAAAGGAG 
ACTATCTTAC GAGAACCAGA TGAAGCAAGC GATGAAGACA GAAGGAAGAA TGCCGACTGC 
TATGCCGAGC TGGTCTGCTT TCTTTTTGAA GCCTTGACAG GAGAGGACCC AGAAGAGGCT 
GCAAGTGGCT TCTCTCCTGA AGCGAGGCAG GATCCCCCAG CTGAGCATCA GAGCAGTTTG 
AGGAGGAGCT GCCAATCATG TTCAGACTCC ACCCACTGGG ATCTGAAGGT GCCCTCCATC 
TCCATGGAGA CAGGGGTGTC GGTGTACAAC CTCAGCTCTC AGGCAGGGAG TTATGAGTGT 
ACAGTGTCGG GTTTGCGCTG GGTGTGTGGT GGTGACGTCA CCCTGCAATA TCACTTCAGC 
ACTGAGGAGC TGTCCTCTGC CCAGCTAGAT ACAGAGATAC AGATACAGTT ACACTACATC 
AGTCCCTTGA TGGACATCAA GGTTATCTCA GGTGAACTGG ACGAGATCCA TCTGCCCCAC 
TCCCTCTGTT TGGGAGATTC TGACAAACAA ACAACAAACA AGGCTGACTG CAGTCACCAT 
TCTAAGTTAA GGGATGCAGT GAGAGTTCTG CATTGGGATG ACAGCGGGGT TTCCCTGGAG 
ACGTGCGAGC TGATGCGCTT CCATGCCAGG CTTGTCAAGC CCCGCTTCCA TGCCAGGCTT 
GTCAAGCCCC GCTTCTCTCT GTGGCAGTTA GTTCTTAGTC TGGGCGTCCC TGTAATGACC 
CACTGTGAGG TGTTGATCTA TCAGTCCTAC GCAGAACCCC TCATTCTGAA CACATATGTT 
GTGCCGAACA CATCCACAGC GAAGAACGCC ATAGAGGAGG AATGGAAAAG CCGTGGTGGC 
ATCTACATCA AGAAGGAACC ACTCATAACA TCTATCCGAA TGAATTCAAA CTTCAAGTTA 
TCCACTTCCT GCCTGTCTAC AATCATACCA GAGGAGATCA GTCTAACTTA TAACACTTCT 
CCAGCCTACT TTGAAGTGTG CATTAAAAAG CCAGACGACG AATTTGAAAT GGAGCTGATG 
GTTGCAGAGG TTAGACCGAT ATGGAAAGCT GCTATTCGAA AGGGAGCCGA CTACAAGACG 
GCCATGCCAA CACTTTTCCT TCCCACAGCC TTGACAGGAG AGGACCCAGA AGAGGCTGCA 
AGTGGCTTCC CTCCTGAAGC TAAGTATGCG AAAATTGTAG CTCAGGGTGG AAGCCATATC 
TCAGTTCCAA CTGTGACCGG CAATACAGTT CAGGGAAACA TCAGCATCAA CTCAAACATT 
CATCATCATT ATCATGATCA TACCTCAAAA ATACATGAAT ACAAGACATC CATCTGCTCC 
ACATATGAAA ATGTTAAGGA GTATAACTCT GGACCTGGTG AGAATGTGCT GCTGGCTGAC 
CGCTACACTG ACCTGCTGAT CGTTGAGACA CACAGAAAGC AGAGAGAAAG AGAGGAGGAG 
ATCTGTTTTA GAGGAAAACA TCACCAGCAG GTCTTAAAAA CCAGGGCCAG TGAAGCATAC 
AGCAGAATCA CTGTTGACCA GTTGTTTAAA CCCAATGGCG TTGGAGATGT TCCAAAGGCA 
GTCATTCTCC AGGGCCACTC TGGACATGGC AAATCCTTTA CTGTTCAGAA GATAATGTGC 
GACTGGGCCT CAGGAAAAGT ATTCAAAGAC TTGTTCCACC TTGTTCTTCA CCTTAAATGC 
AAAGAGCTTA ATGATATCCC AGAGGCACAC AGTCTGGTGG ATCTCCTGAG CTACTGTCCA 
AGCTTCACCA GTGAGACAGC AGAGGTGCTG AAGGACTCAA AAATGAAAGT GCTCTTCCTC 
ATTGATGGCT TTGATGAGCT CAAGTTCTCA TTTGAGAAAA CTAGCACAGT GCCACCTAAA 
GACCCTTTCA GAGAAGCTCC TGTTGAGGCC ACTCTGAGTG CTCTGCTGAA GGGGCTTGTC 
CTGCCTAAGT GCTTCCTGCT GGTCACCACC AGGTCCACTG CTTCAGACAA ACTGAGCAAG 
CTGCTCAGTG ATTCTCAGCG TTTCACTGAC ATCCTAGGCT TCACTGAGGA GGGGGTGAAG 
GAGTACTTCC AGAGGTTTTT CAAAGAAGAG CTGCTAGCAA AGAAAGCATT CGACTGTGTG 
AGGACCAACG AGACTTTGTA TACTGCCTGC TCCATCCCCG TCATCTGCTG GATCATCTGC 
ACAGTTTTCA GGGAGCAAGA AGAAGAAGGC CTGGACATCA ATAAGGAACT AGAAACAACC 
ACCTCTATAT TTGTGCACTT TGTGTCCATT CTACTGAAGC ATCACTGCCA GGGTTTGAGT 
CAGCCTGAAA CTCTGCTGAG GAGCCTGGGA CAGCTGGCAG AGAGAGGGTT ACAGGAACAT 
CAGGTCCTGT TTGATGAGAA GACTTTGTCT GAGGCTTTCC CTGATCCATC ACAAGCAACA 
AAATACAATC CTTTCCTCTG CAAATTCTTG CAAAGGAAGA AAGTCAAACA GGAAAGAATG 
TACAGTTTCA TGCATATGAG CTTCCAGGAG TTCTTCGCTG CTCTCCAGTA CCTGATGTTG 
GAGAATGAGG AAGAGGCACT TACAAAACTA CAGAAGTTGT TAGGAGACGT TAACCGTTTT 
AAACCTGTTA TTCAATTCCT TTTTGGGCTT TCAAACAGAG ACATCCCCTC ACACCTGAAA 
ACGCAATGCT GGCCATCCAT TAAAGCTCAT CTGCAGAAGT GGCTTCTAAG GGTTTTGCAA 
AATGACGAAA TGCATCAAGG GGATATGCTG CATATACTCC ATTGTCTCTA TGAGCTCCAT 
GAGGAGGAGT TCGTAAGGGA GGCCATGGGA GTCTGGGGTG AGGTGAAGTT TCACTCCATT 
CCCCTGACGA GGACAGACTG CTGGGTGCTG CTGTACTGCC TGCAGTGTTG CCCGACCATC 
AGAAGACTGG CGCTCCATTA CTGCAACATA ACAGCAGAGA AGCTGATGCT GCTGCAGCCT 
GCACTGAGCA GGTGTGAGGA GCTGGGGTTA TTTGTGGAGG GCCTGTCAGA TGCTGATGTT 
GTTGACCTGA TCTCAGCTCT GGGGGAGGGG AACATCCTGA CTGAAATGAG GTTAACTGTG 
GAGAGTATGT CAGATGCTGA TGTTTTTGAC CTGATCTCAG CTCTGGTGGC GGGAAAGATC 
CTGACTGAAT TGAGGCTGGG TGTGAGTTCA CTATTGTGTT CCACAATGTC ACCTGCTTCA 
CTTACCCTGT CACACGCAGA CAACCCAACC GGCAGCAGCT TTACCAACTT CATCCACAAT 
CCACATAGGA CTCAGGGTGG CTGTATAGGT GTTCTTGAGT CCTTCACTGA CTGGTCTACT 
CTGCCTGGTC TGGAGAAGGT GGAGTTAATG ATGCCCTACC TGACTGAGAA CTGGGCCCAC 
TGGATCCTCA ACCTCATCCA CATGTGCCCC ACTCTGAAGG AAGTAAAGTA A