LOC104393713 cDNA ORF clone, Chaetura pelagica(chimney swift)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC104393713
Entrez Gene ID	104393713
Full Name	VPS35 endosomal protein sorting factor like
Gene Type	protein-coding
Organism	Chaetura pelagica(chimney swift)

mRNA and Protein(s)

mRNA	Protein	Name
XM_010003228.1	XP_010001530.1	LOW QUALITY PROTEIN: UPF0505 protein C16orf62 homolog

Pathways from BioSystems
Gene Ontology

The following LOC104393713 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC104393713 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCh189008	XM_010003228.1 Latest version!	Chaetura pelagica chromosome unknown open reading frame, human C16orf62 (LOC104393713), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC104393713 ( XM_010003228.1 ) cDNA ORF clone, Chaetura pelagica(chimney swift) -> XP_010001530.1 Chaetura pelagica chromosome unknown open reading frame, human C16orf62 (LOC104393713), mRNA.

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CloneID	OCh189008
Clone ID Related Accession (Same CDS sequence)	XM_010003228.1
Accession Version	XM_010003228.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2892bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-10-30
Organism	Chaetura pelagica(chimney swift)
Product	LOW QUALITY PROTEIN: UPF0505 protein C16orf62 homolog
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_009954215.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Chaetura pelagica Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## internal stop codons :: corrected 1 genomic stop codon ##RefSeq-Attributes-END##

ATGGCGGCCT TCCCGTGGCA TTCGAGACCA AGAAACTATG TTTCAGAATC TGAAGTGTGC 
AAACTGGAAT CTGTACCCTT GGATTTTGGT GATTACCATC CACTGAAGCC AATTACAGTT 
ACTGAATCCA AGACCAAGAA AACAAACCGG AAAGGGAGTA CTTCTTCTAC CTCTTCTTCT 
TCTTCTAGTT CTATGGTGGA TCCACTGAGC AGTGTATTGG ATGGTACCGA CCCCTTGTCA 
TTATTTGCAG CAGCTGCAGA TCCTGTCCCT ACTACTGCTA CCATGGATGG TGCACGAAAG 
AAACGGGACA AAGATGACAG CTCAGCAGTG GGAAGTGACT TTGAGCCATG GTCAAGCAAA 
CGTAGTGAAA TCCTTGCTAG ATACACAACA ACAGAGAAGC TTTCTATTAA TCTGTACATG 
GGCTCAGAAA AAGGAAAAGC TACAAATGCT GGCTCAGCAG TTTCTGAAAA AGTGAGGACA 
AGGTTAGAAG AACTGGATGA TCTGGAAGAG GGGTCCCAGA AAGAGCTGTT GAATCTGACT 
CAGCAGGATT ACATGAACCG AATTGAAGAA CTGAACCAGT CTCTGAAGGA TGCTTGGTCC 
TCTGATCAGA AAGTAAAAGC TCTGAAAATA GTCATCCAGT GTTCTAAACT TCTTTCAGAC 
ACAACAGTAA TCCAGTTTTA TCCAAGTAAA TTTGTATTAA TTACAGATAT CCTTGATACT 
TTTGGGAAAC TGGTGTATGA AAGAATCCTG TCAATGTGCG TGGACAATCG TGTTCCTTTG 
CCAGATAATT TTTCTCCAGA GTGTGTCAAT GATACTGCTA AAGAAACTTG CTTAAACTGG 
TTTTTCAAGA TTGCTTCAAT CAGAGAACTC ATTCCCAGAT TCTACGTGGA AGCAGCAATA 
CTGAAGTGCA ATAAGTTCCT ATCTAAAACG GGGATTTCAG AATGTCTCCC ACGGTTAACA 
TCCATGATTA GAGGAATTGG AGATCCACTG GTTGCAGTCT ATGCAAGAGC ATACCTTTGC 
AGGGTTGGGA TGGAAGTGGC ACCACAACTC AAAGAAAGCC TTAACAAAAA TTTCTTTGAC 
TTTCTCCTCA CATTTAAACA AATTCATGGG GATACGGTTC AGAACCAGCT GATAGTACAA 
TGTGTGGAGA TTCCTTTGTA TTTGACTCTC TATTCTCCTG CTATAGACTG GATTTTGCAG 
TGTATTGCAT ACCATGCTCC TGAGGTTCTG CTTACTGAGA TGATGGAGAG ATGCAAAAAA 
CTGGGGAACA ATGCTTTGCT GTTGAATTCA GTAATGTCAG CGTTCAGAGC AGAGTTTATT 
GCTGCAAGAT CTATGGACTT CATTGGCATG ATTAAAGAGT GTGATGAATC TGGATTTCCA 
AAGCATCTCC TCTTTCGCTC CTTGGGATTA AACCTGGCGT TGGCTGATCC TGCTTAAAAC 
GATCGCCTTC AAATATTAAA TGAAGCCTGG AAGGTTATAA CAAAGCTGAA GAACCCACAG 
GATTATATCA ACTGTGCAGA AGTGTGGGTG GAGTACACGT GCAGACATTT CACGAAGCGA 
GAGGTCAATA CAGTTTTGGC TGATGTTATC AAACACATGA CTCCTGATCG AGCATTTGAA 
GATGCTTACC CTCAGCTGCA GTCAGTTATT CAGAAAGTAA TTACCTATAT CTATGACTTC 
TCTCTGCTTT TTTCAGTGGA GAAGTTCTTG CCATTTCTGG ATATGTTCCA GAAGGAAAGT 
GTGAGAGTGG AGGTTTGCAA GTGCATTATG GAATCTTTTA TCAAGCATCA GCAGGAGCCT 
ACCAAGGATC CCGTTATACT CAATGCTCTT CTGCATATCT GCAAGACAAT GCATGATTCT 
GTGAATGCAC TAACACTGGA GGATGAGAAA AGAATGTTAG CAGCTTTGAT AAATGGATTC 
ATAAAAATGG TTTCATTTGG ACGTGACTTT GAACAACAGC TGAGTTTTTA TGTTGAAGCC 
AGGTCAATGT TTTGCAATCT GGAGCCTGTT CTAGTCCAGT TGATTCATTC TGTGAACCAA 
CTAGCAATGG AAACAAGAAA GGTGATGAAA GGAAATCATT CCAGAAAGAC TGCTGCATTT 
GTCAGGGCTT GTGTTGCCTT CTGCTTCATT ACAATTCCAT CTCTGACCAG TATCTTCACA 
CGTCTTAATC TGTATCTACA CTCCGGACAG GTTGCTCTGG CAAATCAGTG CCTTTCACAA 
GCTGATGCTT TTTTCAAAGC TGCAGTGAGC CTTGTTCCTG AAGTGCCAAA AATGATCAGT 
GTAGACGGAA AGATGAGACC TTCTGATGCC TTCCTGCTGG AATTCCTTTG TAATTTTTTT 
TCCACCTTAT TGGTTGTTCC GGACCATCCA GAACAAGGAG TGTTGTTTCT TGTGCGAGGA 
TTACTAAATG TGATCCAGGA TTATACTTGG GAGGATAACA GTGATGACAA AGTCAGGATT 
TATACCAATG TTTTACATCT GCTGTCTGCA ATGACTCAAG AAGCATACAT CTACCATGTA 
GATAAAGTTG ATTCCAATGA TACCCTGTAT GGTGGAGACT CCAAGTTCCT GGCTGAAATT 
AATAAACTGT GTGAAACAGT GATAGCACAG ATCCTGGATC ATCTGAAAAC CCTTGGAAAA 
GAGGAGACCC TGAAGCGACA GAGCCAGTTG GCCCTCTATT TCTTTAACAC TATTTTAGCT 
CACGGGGATC TGCGGAACAA CAAACTAAAC CAGCTTTCAG TCAATCTCTG GAATCTTGCT 
CAGAAACATG GCTTTGCCGA CACTGAGACC ATGGTCAAAG CACTAGAATA CATCAAGAGG 
CGAAGCAAGC AGCCTGAAAT GAGTCACTTC ACAGACTTGG CCCTTCGGCT TCCTCTGGCA 
TCCAGGACCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_010001530.1
CDS	1..2892
Translation	MAAFPWHSRPRNYVSESEVCKLESVPLDFGDYHPLKPITVTESKTKKTNRKGSTSSTSSSSSSSMVDPLSSVLDGTDPLSLFAAAADPVPTTATMDGARKKRDKDDSSAVGSDFEPWSSKRSEILARYTTTEKLSINLYMGSEKGKATNAGSAVSEKVRTRLEELDDLEEGSQKELLNLTQQDYMNRIEELNQSLKDAWSSDQKVKALKIVIQCSKLLSDTTVIQFYPSKFVLITDILDTFGKLVYERILSMCVDNRVPLPDNFSPECVNDTAKETCLNWFFKIASIRELIPRFYVEAAILKCNKFLSKTGISECLPRLTSMIRGIGDPLVAVYARAYLCRVGMEVAPQLKESLNKNFFDFLLTFKQIHGDTVQNQLIVQCVEIPLYLTLYSPAIDWILQCIAYHAPEVLLTEMMERCKKLGNNALLLNSVMSAFRAEFIAARSMDFIGMIKECDESGFPKHLLFRSLGLNLALADPA*NDRLQILNEAWKVITKLKNPQDYINCAEVWVEYTCRHFTKREVNTVLADVIKHMTPDRAFEDAYPQLQSVIQKVITYIYDFSLLFSVEKFLPFLDMFQKESVRVEVCKCIMESFIKHQQEPTKDPVILNALLHICKTMHDSVNALTLEDEKRMLAALINGFIKMVSFGRDFEQQLSFYVEARSMFCNLEPVLVQLIHSVNQLAMETRKVMKGNHSRKTAAFVRACVAFCFITIPSLTSIFTRLNLYLHSGQVALANQCLSQADAFFKAAVSLVPEVPKMISVDGKMRPSDAFLLEFLCNFFSTLLVVPDHPEQGVLFLVRGLLNVIQDYTWEDNSDDKVRIYTNVLHLLSAMTQEAYIYHVDKVDSNDTLYGGDSKFLAEINKLCETVIAQILDHLKTLGKEETLKRQSQLALYFFNTILAHGDLRNNKLNQLSVNLWNLAQKHGFADTETMVKALEYIKRRSKQPEMSHFTDLALRLPLASRT

Target ORF information:

RefSeq Version	XM_010003228.1
Organism	Chaetura pelagica(chimney swift)
Definition	Chaetura pelagica chromosome unknown open reading frame, human C16orf62 (LOC104393713), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_010003228.1

ORF Insert Sequence:

ATGGCGGCCT TCCCGTGGCA TTCGAGACCA AGAAACTATG TTTCAGAATC TGAAGTGTGC 
AAACTGGAAT CTGTACCCTT GGATTTTGGT GATTACCATC CACTGAAGCC AATTACAGTT 
ACTGAATCCA AGACCAAGAA AACAAACCGG AAAGGGAGTA CTTCTTCTAC CTCTTCTTCT 
TCTTCTAGTT CTATGGTGGA TCCACTGAGC AGTGTATTGG ATGGTACCGA CCCCTTGTCA 
TTATTTGCAG CAGCTGCAGA TCCTGTCCCT ACTACTGCTA CCATGGATGG TGCACGAAAG 
AAACGGGACA AAGATGACAG CTCAGCAGTG GGAAGTGACT TTGAGCCATG GTCAAGCAAA 
CGTAGTGAAA TCCTTGCTAG ATACACAACA ACAGAGAAGC TTTCTATTAA TCTGTACATG 
GGCTCAGAAA AAGGAAAAGC TACAAATGCT GGCTCAGCAG TTTCTGAAAA AGTGAGGACA 
AGGTTAGAAG AACTGGATGA TCTGGAAGAG GGGTCCCAGA AAGAGCTGTT GAATCTGACT 
CAGCAGGATT ACATGAACCG AATTGAAGAA CTGAACCAGT CTCTGAAGGA TGCTTGGTCC 
TCTGATCAGA AAGTAAAAGC TCTGAAAATA GTCATCCAGT GTTCTAAACT TCTTTCAGAC 
ACAACAGTAA TCCAGTTTTA TCCAAGTAAA TTTGTATTAA TTACAGATAT CCTTGATACT 
TTTGGGAAAC TGGTGTATGA AAGAATCCTG TCAATGTGCG TGGACAATCG TGTTCCTTTG 
CCAGATAATT TTTCTCCAGA GTGTGTCAAT GATACTGCTA AAGAAACTTG CTTAAACTGG 
TTTTTCAAGA TTGCTTCAAT CAGAGAACTC ATTCCCAGAT TCTACGTGGA AGCAGCAATA 
CTGAAGTGCA ATAAGTTCCT ATCTAAAACG GGGATTTCAG AATGTCTCCC ACGGTTAACA 
TCCATGATTA GAGGAATTGG AGATCCACTG GTTGCAGTCT ATGCAAGAGC ATACCTTTGC 
AGGGTTGGGA TGGAAGTGGC ACCACAACTC AAAGAAAGCC TTAACAAAAA TTTCTTTGAC 
TTTCTCCTCA CATTTAAACA AATTCATGGG GATACGGTTC AGAACCAGCT GATAGTACAA 
TGTGTGGAGA TTCCTTTGTA TTTGACTCTC TATTCTCCTG CTATAGACTG GATTTTGCAG 
TGTATTGCAT ACCATGCTCC TGAGGTTCTG CTTACTGAGA TGATGGAGAG ATGCAAAAAA 
CTGGGGAACA ATGCTTTGCT GTTGAATTCA GTAATGTCAG CGTTCAGAGC AGAGTTTATT 
GCTGCAAGAT CTATGGACTT CATTGGCATG ATTAAAGAGT GTGATGAATC TGGATTTCCA 
AAGCATCTCC TCTTTCGCTC CTTGGGATTA AACCTGGCGT TGGCTGATCC TGCTTAAAAC 
GATCGCCTTC AAATATTAAA TGAAGCCTGG AAGGTTATAA CAAAGCTGAA GAACCCACAG 
GATTATATCA ACTGTGCAGA AGTGTGGGTG GAGTACACGT GCAGACATTT CACGAAGCGA 
GAGGTCAATA CAGTTTTGGC TGATGTTATC AAACACATGA CTCCTGATCG AGCATTTGAA 
GATGCTTACC CTCAGCTGCA GTCAGTTATT CAGAAAGTAA TTACCTATAT CTATGACTTC 
TCTCTGCTTT TTTCAGTGGA GAAGTTCTTG CCATTTCTGG ATATGTTCCA GAAGGAAAGT 
GTGAGAGTGG AGGTTTGCAA GTGCATTATG GAATCTTTTA TCAAGCATCA GCAGGAGCCT 
ACCAAGGATC CCGTTATACT CAATGCTCTT CTGCATATCT GCAAGACAAT GCATGATTCT 
GTGAATGCAC TAACACTGGA GGATGAGAAA AGAATGTTAG CAGCTTTGAT AAATGGATTC 
ATAAAAATGG TTTCATTTGG ACGTGACTTT GAACAACAGC TGAGTTTTTA TGTTGAAGCC 
AGGTCAATGT TTTGCAATCT GGAGCCTGTT CTAGTCCAGT TGATTCATTC TGTGAACCAA 
CTAGCAATGG AAACAAGAAA GGTGATGAAA GGAAATCATT CCAGAAAGAC TGCTGCATTT 
GTCAGGGCTT GTGTTGCCTT CTGCTTCATT ACAATTCCAT CTCTGACCAG TATCTTCACA 
CGTCTTAATC TGTATCTACA CTCCGGACAG GTTGCTCTGG CAAATCAGTG CCTTTCACAA 
GCTGATGCTT TTTTCAAAGC TGCAGTGAGC CTTGTTCCTG AAGTGCCAAA AATGATCAGT 
GTAGACGGAA AGATGAGACC TTCTGATGCC TTCCTGCTGG AATTCCTTTG TAATTTTTTT 
TCCACCTTAT TGGTTGTTCC GGACCATCCA GAACAAGGAG TGTTGTTTCT TGTGCGAGGA 
TTACTAAATG TGATCCAGGA TTATACTTGG GAGGATAACA GTGATGACAA AGTCAGGATT 
TATACCAATG TTTTACATCT GCTGTCTGCA ATGACTCAAG AAGCATACAT CTACCATGTA 
GATAAAGTTG ATTCCAATGA TACCCTGTAT GGTGGAGACT CCAAGTTCCT GGCTGAAATT 
AATAAACTGT GTGAAACAGT GATAGCACAG ATCCTGGATC ATCTGAAAAC CCTTGGAAAA 
GAGGAGACCC TGAAGCGACA GAGCCAGTTG GCCCTCTATT TCTTTAACAC TATTTTAGCT 
CACGGGGATC TGCGGAACAA CAAACTAAAC CAGCTTTCAG TCAATCTCTG GAATCTTGCT 
CAGAAACATG GCTTTGCCGA CACTGAGACC ATGGTCAAAG CACTAGAATA CATCAAGAGG 
CGAAGCAAGC AGCCTGAAAT GAGTCACTTC ACAGACTTGG CCCTTCGGCT TCCTCTGGCA 
TCCAGGACCT GA