LOC101404954 cDNA ORF clone, Ceratotherium simum simum(southern white rhinoceros)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC101404954
Entrez Gene ID	101404954
Full Name	interferon regulatory factor 6
Synonyms	IRF6
Gene Type	protein-coding
Organism	Ceratotherium simum simum(southern white rhinoceros)

mRNA and Protein(s)

mRNA	Protein	Name
XM_004424863.2	XP_004424920.1	interferon regulatory factor 6
XM_014783318.1	XP_014638804.1	interferon regulatory factor 6

Pathways from BioSystems
Gene Ontology

The following LOC101404954 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC101404954 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCe54072	XM_004424863.2 Latest version!	Ceratotherium simum simum interferon regulatory factor 6 (LOC101404954), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OCe54072	XM_014783318.1 Latest version!	Ceratotherium simum simum interferon regulatory factor 6 (LOC101404954), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC101404954 ( XM_004424863.2 ) cDNA ORF clone, Ceratotherium simum simum(southern white rhinoceros) -> XP_004424920.1 Ceratotherium simum simum interferon regulatory factor 6 (LOC101404954), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OCe54072
Clone ID Related Accession (Same CDS sequence)	XM_004424863.2 , XM_014783318.1
Accession Version	XM_004424863.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1404bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-11-26
Organism	Ceratotherium simum simum(southern white rhinoceros)
Product	interferon regulatory factor 6
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004454170.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Nov 27, 2015 this sequence version replaced XM_004424863.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ceratotherium simum simum Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCCTCC ACCCCCGCAG AGTACGGCTG AAGCCCTGGC TGGTGGCCCA GGTGGATAGT 
GGCCTGTACC CTGGGCTCAT CTGGCTACAC AGGGACTCCA AACGCTTCCA GATTCCCTGG 
AAACATGCCA CCCGGCATAG CCCCCAACAA GAGGAGGAAA ATACCATTTT CAAGGCCTGG 
GCTGTGGAGA CAGGGAAGTA CCAGGAAGGG GTAGATGACC CTGATCCTGC TAAATGGAAG 
GCCCAGCTCC GCTGTGCTCT CAACAAGAGC AGGGAATTCA ACCTGATGTA TGATGGCACC 
AAAGAGGTGC CCATGAACCC AGTGAAGATA TATCAAGTGT GTGATATCCC CCAGCCCCAG 
GGCTCAATCA TCAACCCAGG ATCCACTGGA TCTGCTCCTT GGGATGAGAA GGATAATGAT 
GTGGATGAAG AAGATGAGGA AGATGAGCTT GATCAATCAC AGCACCATGT TCCCATCCAG 
GACACCTTCC CCTTCCTGAA CATCAATGGT TCTCCCATGG CACCAGCCAG CGTGGGCAAC 
TGCAGTGTGG GCAACTGCAG CCCTGAAGCA GTGTGGCCCA AAACTGAACC TCTGGAGATG 
GAAGTACCCC AGACACCTAT ACAGCCCTTC TATAGCTCTC CAGAGCTGTG GATAAGCTCT 
CTCCCAATGA CTGACCTGGA CATCAAATTT CAGTATCGTG GGAAGGAGTA TGGGCAGACC 
ATGACCGTGA GCAACCCCCA GGGCTGCCGG CTCTTCTATG GGGACCTGGG TCCCATGCCT 
GACCAGGAGG AGCTCTTTGG TCCCGTCAGC CTGGAGCAGG TCAAGTTCCC AGGTCCAGAG 
CACATCACCA ATGAGAAGCA GAAGCTGTTC ACCAGCAAGC TGCTAGACGT CATGGACAGA 
GGACTGATCC TGGAGGTCAG CGGCCACGCC ATTTATGCCA TCAGGCTGTG CCAGTGCAAG 
GTGTACTGGT CTGGGCCATG TGCCCCATCA CTTGTTGCCC CCAACCTGAT TGAGAGACAA 
AAGAAGGTCA AACTGTTTTG TCTGGAAACA TTCCTTAGTG ATCTCATTGC CCACCAGAAA 
GGACAGATAG AGAAGCAGCC ACCATTTGAG ATCTACTTAT GCTTTGGAGA AGAATGGCCA 
GATGGGAAAC CCCTGGAAAG AAAACTCATC TTGGTTCAGG TCATTCCGGT GGTGGCTCGG 
ATGATCTATG AGATGTTTTC TGGCGATTTC ACGCGATCCT TTGACAGTGG CAGTGTCCGC 
CTGCAGATCT CAACTCCAGA CATCAAAGAT AACATTGTTG CTCAGCTGAA GCAGCTGTAC 
CGCATTCTCC AAACCCAGGA AAGCTGGCAG CCCATGCAGC CCACCCCCAG CATGCAACTG 
CCCCCTGCCC TGCCGGCGCA GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_004424920.1
CDS	284..1687
Translation	MALHPRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSIINPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGNCSVGNCSPEAVWPKTEPLEMEVPQTPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQTMTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSDLIAHQKGQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAQLKQLYRILQTQESWQPMQPTPSMQLPPALPAQ

Target ORF information:

RefSeq Version	XM_004424863.2
Organism	Ceratotherium simum simum(southern white rhinoceros)
Definition	Ceratotherium simum simum interferon regulatory factor 6 (LOC101404954), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_004424863.2

ORF Insert Sequence:

ATGGCCCTCC ACCCCCGCAG AGTACGGCTG AAGCCCTGGC TGGTGGCCCA GGTGGATAGT 
GGCCTGTACC CTGGGCTCAT CTGGCTACAC AGGGACTCCA AACGCTTCCA GATTCCCTGG 
AAACATGCCA CCCGGCATAG CCCCCAACAA GAGGAGGAAA ATACCATTTT CAAGGCCTGG 
GCTGTGGAGA CAGGGAAGTA CCAGGAAGGG GTAGATGACC CTGATCCTGC TAAATGGAAG 
GCCCAGCTCC GCTGTGCTCT CAACAAGAGC AGGGAATTCA ACCTGATGTA TGATGGCACC 
AAAGAGGTGC CCATGAACCC AGTGAAGATA TATCAAGTGT GTGATATCCC CCAGCCCCAG 
GGCTCAATCA TCAACCCAGG ATCCACTGGA TCTGCTCCTT GGGATGAGAA GGATAATGAT 
GTGGATGAAG AAGATGAGGA AGATGAGCTT GATCAATCAC AGCACCATGT TCCCATCCAG 
GACACCTTCC CCTTCCTGAA CATCAATGGT TCTCCCATGG CACCAGCCAG CGTGGGCAAC 
TGCAGTGTGG GCAACTGCAG CCCTGAAGCA GTGTGGCCCA AAACTGAACC TCTGGAGATG 
GAAGTACCCC AGACACCTAT ACAGCCCTTC TATAGCTCTC CAGAGCTGTG GATAAGCTCT 
CTCCCAATGA CTGACCTGGA CATCAAATTT CAGTATCGTG GGAAGGAGTA TGGGCAGACC 
ATGACCGTGA GCAACCCCCA GGGCTGCCGG CTCTTCTATG GGGACCTGGG TCCCATGCCT 
GACCAGGAGG AGCTCTTTGG TCCCGTCAGC CTGGAGCAGG TCAAGTTCCC AGGTCCAGAG 
CACATCACCA ATGAGAAGCA GAAGCTGTTC ACCAGCAAGC TGCTAGACGT CATGGACAGA 
GGACTGATCC TGGAGGTCAG CGGCCACGCC ATTTATGCCA TCAGGCTGTG CCAGTGCAAG 
GTGTACTGGT CTGGGCCATG TGCCCCATCA CTTGTTGCCC CCAACCTGAT TGAGAGACAA 
AAGAAGGTCA AACTGTTTTG TCTGGAAACA TTCCTTAGTG ATCTCATTGC CCACCAGAAA 
GGACAGATAG AGAAGCAGCC ACCATTTGAG ATCTACTTAT GCTTTGGAGA AGAATGGCCA 
GATGGGAAAC CCCTGGAAAG AAAACTCATC TTGGTTCAGG TCATTCCGGT GGTGGCTCGG 
ATGATCTATG AGATGTTTTC TGGCGATTTC ACGCGATCCT TTGACAGTGG CAGTGTCCGC 
CTGCAGATCT CAACTCCAGA CATCAAAGAT AACATTGTTG CTCAGCTGAA GCAGCTGTAC 
CGCATTCTCC AAACCCAGGA AAGCTGGCAG CCCATGCAGC CCACCCCCAG CATGCAACTG 
CCCCCTGCCC TGCCGGCGCA GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC101404954 ( XM_014783318.1 ) cDNA ORF clone, Ceratotherium simum simum(southern white rhinoceros) -> XP_014638804.1 Ceratotherium simum simum interferon regulatory factor 6 (LOC101404954), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OCe54072
Clone ID Related Accession (Same CDS sequence)	XM_004424863.2 , XM_014783318.1
Accession Version	XM_014783318.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1404bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-11-26
Organism	Ceratotherium simum simum(southern white rhinoceros)
Product	interferon regulatory factor 6
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004454170.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ceratotherium simum simum Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCCTCC ACCCCCGCAG AGTACGGCTG AAGCCCTGGC TGGTGGCCCA GGTGGATAGT 
GGCCTGTACC CTGGGCTCAT CTGGCTACAC AGGGACTCCA AACGCTTCCA GATTCCCTGG 
AAACATGCCA CCCGGCATAG CCCCCAACAA GAGGAGGAAA ATACCATTTT CAAGGCCTGG 
GCTGTGGAGA CAGGGAAGTA CCAGGAAGGG GTAGATGACC CTGATCCTGC TAAATGGAAG 
GCCCAGCTCC GCTGTGCTCT CAACAAGAGC AGGGAATTCA ACCTGATGTA TGATGGCACC 
AAAGAGGTGC CCATGAACCC AGTGAAGATA TATCAAGTGT GTGATATCCC CCAGCCCCAG 
GGCTCAATCA TCAACCCAGG ATCCACTGGA TCTGCTCCTT GGGATGAGAA GGATAATGAT 
GTGGATGAAG AAGATGAGGA AGATGAGCTT GATCAATCAC AGCACCATGT TCCCATCCAG 
GACACCTTCC CCTTCCTGAA CATCAATGGT TCTCCCATGG CACCAGCCAG CGTGGGCAAC 
TGCAGTGTGG GCAACTGCAG CCCTGAAGCA GTGTGGCCCA AAACTGAACC TCTGGAGATG 
GAAGTACCCC AGACACCTAT ACAGCCCTTC TATAGCTCTC CAGAGCTGTG GATAAGCTCT 
CTCCCAATGA CTGACCTGGA CATCAAATTT CAGTATCGTG GGAAGGAGTA TGGGCAGACC 
ATGACCGTGA GCAACCCCCA GGGCTGCCGG CTCTTCTATG GGGACCTGGG TCCCATGCCT 
GACCAGGAGG AGCTCTTTGG TCCCGTCAGC CTGGAGCAGG TCAAGTTCCC AGGTCCAGAG 
CACATCACCA ATGAGAAGCA GAAGCTGTTC ACCAGCAAGC TGCTAGACGT CATGGACAGA 
GGACTGATCC TGGAGGTCAG CGGCCACGCC ATTTATGCCA TCAGGCTGTG CCAGTGCAAG 
GTGTACTGGT CTGGGCCATG TGCCCCATCA CTTGTTGCCC CCAACCTGAT TGAGAGACAA 
AAGAAGGTCA AACTGTTTTG TCTGGAAACA TTCCTTAGTG ATCTCATTGC CCACCAGAAA 
GGACAGATAG AGAAGCAGCC ACCATTTGAG ATCTACTTAT GCTTTGGAGA AGAATGGCCA 
GATGGGAAAC CCCTGGAAAG AAAACTCATC TTGGTTCAGG TCATTCCGGT GGTGGCTCGG 
ATGATCTATG AGATGTTTTC TGGCGATTTC ACGCGATCCT TTGACAGTGG CAGTGTCCGC 
CTGCAGATCT CAACTCCAGA CATCAAAGAT AACATTGTTG CTCAGCTGAA GCAGCTGTAC 
CGCATTCTCC AAACCCAGGA AAGCTGGCAG CCCATGCAGC CCACCCCCAG CATGCAACTG 
CCCCCTGCCC TGCCGGCGCA GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_014638804.1
CDS	155..1558
Translation	MALHPRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSIINPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGNCSVGNCSPEAVWPKTEPLEMEVPQTPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQTMTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSDLIAHQKGQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAQLKQLYRILQTQESWQPMQPTPSMQLPPALPAQ

Target ORF information:

RefSeq Version	XM_014783318.1
Organism	Ceratotherium simum simum(southern white rhinoceros)
Definition	Ceratotherium simum simum interferon regulatory factor 6 (LOC101404954), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_014783318.1

ORF Insert Sequence:

ATGGCCCTCC ACCCCCGCAG AGTACGGCTG AAGCCCTGGC TGGTGGCCCA GGTGGATAGT 
GGCCTGTACC CTGGGCTCAT CTGGCTACAC AGGGACTCCA AACGCTTCCA GATTCCCTGG 
AAACATGCCA CCCGGCATAG CCCCCAACAA GAGGAGGAAA ATACCATTTT CAAGGCCTGG 
GCTGTGGAGA CAGGGAAGTA CCAGGAAGGG GTAGATGACC CTGATCCTGC TAAATGGAAG 
GCCCAGCTCC GCTGTGCTCT CAACAAGAGC AGGGAATTCA ACCTGATGTA TGATGGCACC 
AAAGAGGTGC CCATGAACCC AGTGAAGATA TATCAAGTGT GTGATATCCC CCAGCCCCAG 
GGCTCAATCA TCAACCCAGG ATCCACTGGA TCTGCTCCTT GGGATGAGAA GGATAATGAT 
GTGGATGAAG AAGATGAGGA AGATGAGCTT GATCAATCAC AGCACCATGT TCCCATCCAG 
GACACCTTCC CCTTCCTGAA CATCAATGGT TCTCCCATGG CACCAGCCAG CGTGGGCAAC 
TGCAGTGTGG GCAACTGCAG CCCTGAAGCA GTGTGGCCCA AAACTGAACC TCTGGAGATG 
GAAGTACCCC AGACACCTAT ACAGCCCTTC TATAGCTCTC CAGAGCTGTG GATAAGCTCT 
CTCCCAATGA CTGACCTGGA CATCAAATTT CAGTATCGTG GGAAGGAGTA TGGGCAGACC 
ATGACCGTGA GCAACCCCCA GGGCTGCCGG CTCTTCTATG GGGACCTGGG TCCCATGCCT 
GACCAGGAGG AGCTCTTTGG TCCCGTCAGC CTGGAGCAGG TCAAGTTCCC AGGTCCAGAG 
CACATCACCA ATGAGAAGCA GAAGCTGTTC ACCAGCAAGC TGCTAGACGT CATGGACAGA 
GGACTGATCC TGGAGGTCAG CGGCCACGCC ATTTATGCCA TCAGGCTGTG CCAGTGCAAG 
GTGTACTGGT CTGGGCCATG TGCCCCATCA CTTGTTGCCC CCAACCTGAT TGAGAGACAA 
AAGAAGGTCA AACTGTTTTG TCTGGAAACA TTCCTTAGTG ATCTCATTGC CCACCAGAAA 
GGACAGATAG AGAAGCAGCC ACCATTTGAG ATCTACTTAT GCTTTGGAGA AGAATGGCCA 
GATGGGAAAC CCCTGGAAAG AAAACTCATC TTGGTTCAGG TCATTCCGGT GGTGGCTCGG 
ATGATCTATG AGATGTTTTC TGGCGATTTC ACGCGATCCT TTGACAGTGG CAGTGTCCGC 
CTGCAGATCT CAACTCCAGA CATCAAAGAT AACATTGTTG CTCAGCTGAA GCAGCTGTAC 
CGCATTCTCC AAACCCAGGA AAGCTGGCAG CCCATGCAGC CCACCCCCAG CATGCAACTG 
CCCCCTGCCC TGCCGGCGCA GTAG