LOC107877841 cDNA ORF clone, Capsicum annuum

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107877841
Entrez Gene ID	107877841
Full Name	uncharacterized LOC107877841
Gene Type	protein-coding
Organism	Capsicum annuum

mRNA and Protein(s)

mRNA	Protein	Name
XM_016724603.1	XP_016580089.1	uncharacterized protein LOC107877841 isoform X1
XM_016724604.1	XP_016580090.1	uncharacterized protein LOC107877841 isoform X2

Pathways from BioSystems
Gene Ontology

The following LOC107877841 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107877841 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa107984	XM_016724603.1 Latest version!	Capsicum annuum uncharacterized LOC107877841 (LOC107877841), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OCa107985	XM_016724604.1 Latest version!	Capsicum annuum uncharacterized LOC107877841 (LOC107877841), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107877841 ( XM_016724603.1 ) cDNA ORF clone, Capsicum annuum -> XP_016580089.1 Capsicum annuum uncharacterized LOC107877841 (LOC107877841), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OCa107984
Clone ID Related Accession (Same CDS sequence)	XM_016724603.1
Accession Version	XM_016724603.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1062bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	uncharacterized protein LOC107877841 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029983.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATAAGCA GGAGATGCTG CGTGCAGCGT TTATTTACGA TTCGCAATAG TGTTAATATT 
AATCATCTGC GGTGGTGGAT TCGTCCTTTA ATGGCCCTTA CATCTACCTT TTCTGTTGGA 
CCCAAAGATT CCTTTAAGGG CTTTCAGTTT TTATCTACCT CCATTGATCC TCAGGGTGGA 
AAATACCCAT TTAACAATGT CGGGCTTTTG GGCACCTGCT GTTCGTTTAA TGACGCGAAT 
GTCAGTTGTG CGGGTAACAG TAATAAGTAC ATGAATGGAT TTCACCCGGC ACAGGTTTTT 
GTTCCACCTC ATCCGCTCTT GCTACATGAT GATGTTGAGG AAGCTAGCAC TAGTAAGCCT 
TCTGACACTG ACAACAATTC ATCTCATAGA GGAAACTCTG CTGGATTCTT TAACCAGGAT 
TTACACGACA AAATCGTTGT AGCTGTCGAT GTTGATGAAG TCCTTGGGAA CTTTGTTTCA 
GCTCTCAATG AATTTATTGC AGATCGTTAC TCATCATACC ATTCGGTGTC CGAGTATCAT 
GTATATGAAT TCTTCAAGAT ATGGAAGTGC TCAAGAGATG AAGCTGATAT CCGAGTCCAT 
GAATTCTTCA AGACCTCCTA TTTCAAGACC GGAATTCGTC CAATTCCCGG TGCTCAACAG 
ACTCTTCAAA AGTTGTCTAG ATTCTGTAAC CTATCAATTG TAACGTCCCG GCAAAATGCC 
ATCAAAGACC ACACAATTGA GTGGATTGAG AGACATTATC CTGGATTGTT TCAGGATATG 
CACTTTGGCA ATCACTTTGC GCTGAATGGC AAGTCTATAG CCAAATCAGA TATTTGCAGG 
TCCTTGGGAG CAAATGTTTT GATTGATGAC AACCCGAGGT ATGCTATCGA ATGTGCGGAA 
GTTGGAATCA AGGTTCTTCT CTTTGATTAT GAAAATTCAT ACCCATGGTC CAAAAGTGAG 
TCACTTAATG GGCATCCAAT GGTAAAAAAA GTGCACAACT GGGGAGAAGT GGAGCATCAA 
TTAACTTCAT GGATAGTTCC CAGGAATTTC TCTCCGAGGT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016580089.1
CDS	341..1402
Translation	MISRRCCVQRLFTIRNSVNINHLRWWIRPLMALTSTFSVGPKDSFKGFQFLSTSIDPQGGKYPFNNVGLLGTCCSFNDANVSCAGNSNKYMNGFHPAQVFVPPHPLLLHDDVEEASTSKPSDTDNNSSHRGNSAGFFNQDLHDKIVVAVDVDEVLGNFVSALNEFIADRYSSYHSVSEYHVYEFFKIWKCSRDEADIRVHEFFKTSYFKTGIRPIPGAQQTLQKLSRFCNLSIVTSRQNAIKDHTIEWIERHYPGLFQDMHFGNHFALNGKSIAKSDICRSLGANVLIDDNPRYAIECAEVGIKVLLFDYENSYPWSKSESLNGHPMVKKVHNWGEVEHQLTSWIVPRNFSPR

Target ORF information:

RefSeq Version	XM_016724603.1
Organism	Capsicum annuum
Definition	Capsicum annuum uncharacterized LOC107877841 (LOC107877841), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016724603.1

ORF Insert Sequence:

ATGATAAGCA GGAGATGCTG CGTGCAGCGT TTATTTACGA TTCGCAATAG TGTTAATATT 
AATCATCTGC GGTGGTGGAT TCGTCCTTTA ATGGCCCTTA CATCTACCTT TTCTGTTGGA 
CCCAAAGATT CCTTTAAGGG CTTTCAGTTT TTATCTACCT CCATTGATCC TCAGGGTGGA 
AAATACCCAT TTAACAATGT CGGGCTTTTG GGCACCTGCT GTTCGTTTAA TGACGCGAAT 
GTCAGTTGTG CGGGTAACAG TAATAAGTAC ATGAATGGAT TTCACCCGGC ACAGGTTTTT 
GTTCCACCTC ATCCGCTCTT GCTACATGAT GATGTTGAGG AAGCTAGCAC TAGTAAGCCT 
TCTGACACTG ACAACAATTC ATCTCATAGA GGAAACTCTG CTGGATTCTT TAACCAGGAT 
TTACACGACA AAATCGTTGT AGCTGTCGAT GTTGATGAAG TCCTTGGGAA CTTTGTTTCA 
GCTCTCAATG AATTTATTGC AGATCGTTAC TCATCATACC ATTCGGTGTC CGAGTATCAT 
GTATATGAAT TCTTCAAGAT ATGGAAGTGC TCAAGAGATG AAGCTGATAT CCGAGTCCAT 
GAATTCTTCA AGACCTCCTA TTTCAAGACC GGAATTCGTC CAATTCCCGG TGCTCAACAG 
ACTCTTCAAA AGTTGTCTAG ATTCTGTAAC CTATCAATTG TAACGTCCCG GCAAAATGCC 
ATCAAAGACC ACACAATTGA GTGGATTGAG AGACATTATC CTGGATTGTT TCAGGATATG 
CACTTTGGCA ATCACTTTGC GCTGAATGGC AAGTCTATAG CCAAATCAGA TATTTGCAGG 
TCCTTGGGAG CAAATGTTTT GATTGATGAC AACCCGAGGT ATGCTATCGA ATGTGCGGAA 
GTTGGAATCA AGGTTCTTCT CTTTGATTAT GAAAATTCAT ACCCATGGTC CAAAAGTGAG 
TCACTTAATG GGCATCCAAT GGTAAAAAAA GTGCACAACT GGGGAGAAGT GGAGCATCAA 
TTAACTTCAT GGATAGTTCC CAGGAATTTC TCTCCGAGGT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC107877841 ( XM_016724604.1 ) cDNA ORF clone, Capsicum annuum -> XP_016580090.1 Capsicum annuum uncharacterized LOC107877841 (LOC107877841), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OCa107985
Clone ID Related Accession (Same CDS sequence)	XM_016724604.1
Accession Version	XM_016724604.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1020bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	uncharacterized protein LOC107877841 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029983.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATAAGCA GGAGATGCTG CGTGCAGCGT TTATTTACGA TTCGCAATAG TGTTAATATT 
AATCATCTGC GGTGGTGGAT TCGTCCTTTA ATGGCCCTTA CATCTACCTT TTCTGTTGGA 
CCCAAAGATT CCTTTAAGGG CTTTCAGTTT TTATCTACCT CCATTGATCC TCAGGGTGGA 
AAATACCCAT TTAACAATGT CGGGCTTTTG GGCACCTGCT GTTCGTTTAA TGACGCGAAT 
GTCAGTTGTG CGGGTAACAG TAATAAGTAC ATGAATGGAT TTCACCCGGC ACAGGTTTTT 
GTTCCACCTC ATCCGCTCTT GCTACATGAT GATGTTGAGG AAGCTAGCAC TAGTAAGCCT 
TCTGACACTG ACAACAATTC ATCTCATAGA GGAAACTCTG CTGGATTCTT TAACCAGGAT 
TTACACGACA AAATCGTTGT AGCTGTCGAT GTTGATGAAG ATCGTTACTC ATCATACCAT 
TCGGTGTCCG AGTATCATGT ATATGAATTC TTCAAGATAT GGAAGTGCTC AAGAGATGAA 
GCTGATATCC GAGTCCATGA ATTCTTCAAG ACCTCCTATT TCAAGACCGG AATTCGTCCA 
ATTCCCGGTG CTCAACAGAC TCTTCAAAAG TTGTCTAGAT TCTGTAACCT ATCAATTGTA 
ACGTCCCGGC AAAATGCCAT CAAAGACCAC ACAATTGAGT GGATTGAGAG ACATTATCCT 
GGATTGTTTC AGGATATGCA CTTTGGCAAT CACTTTGCGC TGAATGGCAA GTCTATAGCC 
AAATCAGATA TTTGCAGGTC CTTGGGAGCA AATGTTTTGA TTGATGACAA CCCGAGGTAT 
GCTATCGAAT GTGCGGAAGT TGGAATCAAG GTTCTTCTCT TTGATTATGA AAATTCATAC 
CCATGGTCCA AAAGTGAGTC ACTTAATGGG CATCCAATGG TAAAAAAAGT GCACAACTGG 
GGAGAAGTGG AGCATCAATT AACTTCATGG ATAGTTCCCA GGAATTTCTC TCCGAGGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016580090.1
CDS	342..1361
Translation	MISRRCCVQRLFTIRNSVNINHLRWWIRPLMALTSTFSVGPKDSFKGFQFLSTSIDPQGGKYPFNNVGLLGTCCSFNDANVSCAGNSNKYMNGFHPAQVFVPPHPLLLHDDVEEASTSKPSDTDNNSSHRGNSAGFFNQDLHDKIVVAVDVDEDRYSSYHSVSEYHVYEFFKIWKCSRDEADIRVHEFFKTSYFKTGIRPIPGAQQTLQKLSRFCNLSIVTSRQNAIKDHTIEWIERHYPGLFQDMHFGNHFALNGKSIAKSDICRSLGANVLIDDNPRYAIECAEVGIKVLLFDYENSYPWSKSESLNGHPMVKKVHNWGEVEHQLTSWIVPRNFSPR

Target ORF information:

RefSeq Version	XM_016724604.1
Organism	Capsicum annuum
Definition	Capsicum annuum uncharacterized LOC107877841 (LOC107877841), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016724604.1

ORF Insert Sequence:

ATGATAAGCA GGAGATGCTG CGTGCAGCGT TTATTTACGA TTCGCAATAG TGTTAATATT 
AATCATCTGC GGTGGTGGAT TCGTCCTTTA ATGGCCCTTA CATCTACCTT TTCTGTTGGA 
CCCAAAGATT CCTTTAAGGG CTTTCAGTTT TTATCTACCT CCATTGATCC TCAGGGTGGA 
AAATACCCAT TTAACAATGT CGGGCTTTTG GGCACCTGCT GTTCGTTTAA TGACGCGAAT 
GTCAGTTGTG CGGGTAACAG TAATAAGTAC ATGAATGGAT TTCACCCGGC ACAGGTTTTT 
GTTCCACCTC ATCCGCTCTT GCTACATGAT GATGTTGAGG AAGCTAGCAC TAGTAAGCCT 
TCTGACACTG ACAACAATTC ATCTCATAGA GGAAACTCTG CTGGATTCTT TAACCAGGAT 
TTACACGACA AAATCGTTGT AGCTGTCGAT GTTGATGAAG ATCGTTACTC ATCATACCAT 
TCGGTGTCCG AGTATCATGT ATATGAATTC TTCAAGATAT GGAAGTGCTC AAGAGATGAA 
GCTGATATCC GAGTCCATGA ATTCTTCAAG ACCTCCTATT TCAAGACCGG AATTCGTCCA 
ATTCCCGGTG CTCAACAGAC TCTTCAAAAG TTGTCTAGAT TCTGTAACCT ATCAATTGTA 
ACGTCCCGGC AAAATGCCAT CAAAGACCAC ACAATTGAGT GGATTGAGAG ACATTATCCT 
GGATTGTTTC AGGATATGCA CTTTGGCAAT CACTTTGCGC TGAATGGCAA GTCTATAGCC 
AAATCAGATA TTTGCAGGTC CTTGGGAGCA AATGTTTTGA TTGATGACAA CCCGAGGTAT 
GCTATCGAAT GTGCGGAAGT TGGAATCAAG GTTCTTCTCT TTGATTATGA AAATTCATAC 
CCATGGTCCA AAAGTGAGTC ACTTAATGGG CATCCAATGG TAAAAAAAGT GCACAACTGG 
GGAGAAGTGG AGCATCAATT AACTTCATGG ATAGTTCCCA GGAATTTCTC TCCGAGGTAG