LOC107876260 cDNA ORF clone, Capsicum annuum

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107876260
Entrez Gene ID	107876260
Full Name	putative late blight resistance protein homolog R1B-16
Gene Type	protein-coding
Organism	Capsicum annuum

mRNA and Protein(s)

mRNA	Protein	Name
XM_016723220.1	XP_016578706.1	putative late blight resistance protein homolog R1B-16

Pathways from BioSystems
Gene Ontology

The following LOC107876260 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107876260 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa106900	XM_016723220.1 Latest version!	Capsicum annuum putative late blight resistance protein homolog R1B-16 (LOC107876260), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107876260 ( XM_016723220.1 ) cDNA ORF clone, Capsicum annuum -> XP_016578706.1 Capsicum annuum putative late blight resistance protein homolog R1B-16 (LOC107876260), mRNA.

Price & Availability↑

CloneID	OCa106900
Clone ID Related Accession (Same CDS sequence)	XM_016723220.1
Accession Version	XM_016723220.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1605bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	putative late blight resistance protein homolog R1B-16
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029983.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END##

ATGAGACGAT GCTTTCCAAC TGAAGACTTC AATGCGGGGA GTCGAATACT GTTGACTACC 
CGTAACAATG AAGTAGCCTG TTATGCTGAT ACGGAGAATC TTTCCATGCA GATGAACTTC 
ATGGATCAAG ATGAGAGTTG GAACCTTTTC AAAAGGGCAT CATTTTCAAA TGAAGCATTG 
TCATCTGAGT TTGAGACTAT TGGGAAGAAA ATCGCGGAGA AATGTCACGG GTTACCACTA 
ACTATTGTCG TAGTTGCTGG GCTTCTCAAA TCTAAAAGGG AAATAGAAAA TTGGAAAAGT 
GTTGCCAAAG ATGTCACGTC ATTCATCAGA AATGATCCTG ATGAACAATG TTCACGTGTG 
CTTGGGTTGA GTTACAATCA CTTGAGTAGC GATCTAAAAG CATGTCTTCT GCATTTCGGG 
ATTTTTCCAG AAGACAATGA GATTCCAGTG AAGAAATTGA AGAGATCATG GATGGCTGAG 
GGGTACCTGA AGTTGGAAAA TGATTTGGAA GGAGAGGTTG AGAAGTGTTT GCAAGAGCTT 
GTCGATAGAT GTCTAGTCCT CATCTTCAAG AAAAGTCTAG ATGGAACAAA AATTAGATCA 
TGTAAGGTTC ATGATCTAAT ATATGACCTG TGCGTGAGAG AGATTCAAAG GGAGAACATT 
TTTATCATGA ACGACATTGT GCCTGATTAC TCAGATTCAG ATTCAGATTC AGAAGGTCGA 
TATCTCAGTA TGCAAAAAAT GGCTCTTCTT ACCCCTGTAC ATCGTCAGGA TTCAATGTTA 
CCCCCTGTTC TCAAATCAAA GCTTATTAAT TTCAAATTAC TCAAAGTCTT GGAGTTGAGA 
CACAGAGAGA TTGATGTTTT CCCACTACAG ATACTAAGCC TCTTCTGGTT GAGGTACCTA 
TCATTGCACT GCAATGAAAA TTTAAAAATA CCTCCAGAAA TTTGCAGGTT ATGGAATCTG 
CAGACATTCA TTGTTAAAGG GTTTAATCAA TCTGCAGTTA TAACTTTTCC TGAGGAAATT 
TGGGGACTAA TGCAATTGCG GCATCTTAAA CTGCCCAGAT TTTATTTGCC AGATTGCCCA 
AGTGGATCTG TTGACAAAGG AAGGCACTTG GATTTTTCAA ACTTACAAAC TATTTCTTAC 
TTGTCTCCAC GTTGTTGCAC GAAGGAGGTT ATTATGGGGA TTCAGAATGT CAAAGAATTA 
GGAATCTGTG GATATAAGAC TGACTCTAAT AGTATTCGGG ACACTAGGCT TCTCAACAAT 
CTTGTCCATC TGCAGCAACT TGAAACATTG AATTTTATAT TTTGCTTTCC CCATTTTCCA 
GCAAGTGGAA AAGCTTTTCC AGGAACTCTC AAGAAGCTGA AGTTGGAAAG AACTTTGATA 
AGTTGGTCGT ACTTGGACAT CATAGCTGAA TTGCCTAACC TTGAGGTGCT GAAGCTGGTG 
GATCGTGCTT GTCTTGACAA TGAATGGTAT CCAAATGTCA GGGGATTTAC TCGATTGAAG 
GTTTTGTTAA TTGAAGGTGA TTATCTCAAG TACTGGGAAG CCACAAATGA CAATTTTCCT 
GTCCTTGAGC GCCTTGTGCT TAAAGAATAC ATATATTTGA AATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016578706.1
CDS	1..1605
Translation	MRRCFPTEDFNAGSRILLTTRNNEVACYADTENLSMQMNFMDQDESWNLFKRASFSNEALSSEFETIGKKIAEKCHGLPLTIVVVAGLLKSKREIENWKSVAKDVTSFIRNDPDEQCSRVLGLSYNHLSSDLKACLLHFGIFPEDNEIPVKKLKRSWMAEGYLKLENDLEGEVEKCLQELVDRCLVLIFKKSLDGTKIRSCKVHDLIYDLCVREIQRENIFIMNDIVPDYSDSDSDSEGRYLSMQKMALLTPVHRQDSMLPPVLKSKLINFKLLKVLELRHREIDVFPLQILSLFWLRYLSLHCNENLKIPPEICRLWNLQTFIVKGFNQSAVITFPEEIWGLMQLRHLKLPRFYLPDCPSGSVDKGRHLDFSNLQTISYLSPRCCTKEVIMGIQNVKELGICGYKTDSNSIRDTRLLNNLVHLQQLETLNFIFCFPHFPASGKAFPGTLKKLKLERTLISWSYLDIIAELPNLEVLKLVDRACLDNEWYPNVRGFTRLKVLLIEGDYLKYWEATNDNFPVLERLVLKEYIYLK

Target ORF information:

RefSeq Version	XM_016723220.1
Organism	Capsicum annuum
Definition	Capsicum annuum putative late blight resistance protein homolog R1B-16 (LOC107876260), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016723220.1

ORF Insert Sequence:

ATGAGACGAT GCTTTCCAAC TGAAGACTTC AATGCGGGGA GTCGAATACT GTTGACTACC 
CGTAACAATG AAGTAGCCTG TTATGCTGAT ACGGAGAATC TTTCCATGCA GATGAACTTC 
ATGGATCAAG ATGAGAGTTG GAACCTTTTC AAAAGGGCAT CATTTTCAAA TGAAGCATTG 
TCATCTGAGT TTGAGACTAT TGGGAAGAAA ATCGCGGAGA AATGTCACGG GTTACCACTA 
ACTATTGTCG TAGTTGCTGG GCTTCTCAAA TCTAAAAGGG AAATAGAAAA TTGGAAAAGT 
GTTGCCAAAG ATGTCACGTC ATTCATCAGA AATGATCCTG ATGAACAATG TTCACGTGTG 
CTTGGGTTGA GTTACAATCA CTTGAGTAGC GATCTAAAAG CATGTCTTCT GCATTTCGGG 
ATTTTTCCAG AAGACAATGA GATTCCAGTG AAGAAATTGA AGAGATCATG GATGGCTGAG 
GGGTACCTGA AGTTGGAAAA TGATTTGGAA GGAGAGGTTG AGAAGTGTTT GCAAGAGCTT 
GTCGATAGAT GTCTAGTCCT CATCTTCAAG AAAAGTCTAG ATGGAACAAA AATTAGATCA 
TGTAAGGTTC ATGATCTAAT ATATGACCTG TGCGTGAGAG AGATTCAAAG GGAGAACATT 
TTTATCATGA ACGACATTGT GCCTGATTAC TCAGATTCAG ATTCAGATTC AGAAGGTCGA 
TATCTCAGTA TGCAAAAAAT GGCTCTTCTT ACCCCTGTAC ATCGTCAGGA TTCAATGTTA 
CCCCCTGTTC TCAAATCAAA GCTTATTAAT TTCAAATTAC TCAAAGTCTT GGAGTTGAGA 
CACAGAGAGA TTGATGTTTT CCCACTACAG ATACTAAGCC TCTTCTGGTT GAGGTACCTA 
TCATTGCACT GCAATGAAAA TTTAAAAATA CCTCCAGAAA TTTGCAGGTT ATGGAATCTG 
CAGACATTCA TTGTTAAAGG GTTTAATCAA TCTGCAGTTA TAACTTTTCC TGAGGAAATT 
TGGGGACTAA TGCAATTGCG GCATCTTAAA CTGCCCAGAT TTTATTTGCC AGATTGCCCA 
AGTGGATCTG TTGACAAAGG AAGGCACTTG GATTTTTCAA ACTTACAAAC TATTTCTTAC 
TTGTCTCCAC GTTGTTGCAC GAAGGAGGTT ATTATGGGGA TTCAGAATGT CAAAGAATTA 
GGAATCTGTG GATATAAGAC TGACTCTAAT AGTATTCGGG ACACTAGGCT TCTCAACAAT 
CTTGTCCATC TGCAGCAACT TGAAACATTG AATTTTATAT TTTGCTTTCC CCATTTTCCA 
GCAAGTGGAA AAGCTTTTCC AGGAACTCTC AAGAAGCTGA AGTTGGAAAG AACTTTGATA 
AGTTGGTCGT ACTTGGACAT CATAGCTGAA TTGCCTAACC TTGAGGTGCT GAAGCTGGTG 
GATCGTGCTT GTCTTGACAA TGAATGGTAT CCAAATGTCA GGGGATTTAC TCGATTGAAG 
GTTTTGTTAA TTGAAGGTGA TTATCTCAAG TACTGGGAAG CCACAAATGA CAATTTTCCT 
GTCCTTGAGC GCCTTGTGCT TAAAGAATAC ATATATTTGA AATAG