LOC107874408 cDNA ORF clone, Capsicum annuum

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107874408
Entrez Gene ID	107874408
Full Name	putative late blight resistance protein homolog R1B-16
Gene Type	protein-coding
Organism	Capsicum annuum

mRNA and Protein(s)

mRNA	Protein	Name
XM_016721197.1	XP_016576683.1	putative late blight resistance protein homolog R1B-16

Pathways from BioSystems
Gene Ontology

The following LOC107874408 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107874408 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa105365	XM_016721197.1 Latest version!	Capsicum annuum putative late blight resistance protein homolog R1B-16 (LOC107874408), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107874408 ( XM_016721197.1 ) cDNA ORF clone, Capsicum annuum -> XP_016576683.1 Capsicum annuum putative late blight resistance protein homolog R1B-16 (LOC107874408), mRNA.

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CloneID	OCa105365
Clone ID Related Accession (Same CDS sequence)	XM_016721197.1
Accession Version	XM_016721197.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2598bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	putative late blight resistance protein homolog R1B-16
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029982.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END##

ATGCTCACTT ATAGAAGATC TGATCATCTA GATGTGGTTG GATATTCAGA TTCAAATTAT 
GCTAGTTGTG TGGATACAAG AAAATTCACA TTTGGATATT TATTTCTGTT AGCTGGAGGA 
GCACTATTAT GGAAGAGTGC GAAACAGCCT GTTATAGCTA CATCCACTAT GGAAGCTGAG 
TTTGTGGCAT GTTTTGAGGC CACAGTCCAG GTGTCATTTT CTGCTCTTCG CAAGGACGTT 
GTCAACATTC TTGATATCAT GGAGAGGTTA AAGAATGAAG AAGATCAAAA AGATGTTGAC 
ATGGACAATC AAATTGAAAA CCTGAAATTT ATGCTAACAT TTATATGTAC GCACGTCCAA 
CTTTCGTATT CCGGTTTGGA GCAGTTTCAA GCTACAGCGA ATGCTCCAAC AGAAGTGGTT 
GAGAATCTGT TTCGACCAAT ATGGGATGAT GTTGAAAACT ACTTCAGGTG TAAATACAAC 
ATGAATCAAG TCCTTCGTAG CCTCATGGAT AATATCGATG ATTGTATCAG CTCATGGCAT 
TATTCTAAAT CAAGTGTCAT CATGAGTGAG GAGCAATTGG ACTTCCTCCT CCTGAATCTC 
CATCACGTAT ACAAATTTCT TGCTGAGAAT AAGTTTCCAT TAGTGACAGA GTATCAGATT 
CTTCGGAATG TGTGTGACGA CATGAAAGAT TTCTATAGGA TGATAGTGAA TGGTTGTGTT 
GAGCACGAGA TTGTTGAATA TGTGTTACCT CAACTTCAAC CAATGGCTGA GAGACTTGGA 
CTCTTCCTTT TGGATGTGCT AATTAATAAA GACGCCGGAG TCCTCAAGCT AGTGCATCTA 
TTGTTGAATA TTATTCCAAT TGAACTGGAG GTGATGCACA TATGTTTTAC AAATTTGAAT 
GCTTTAACTT CTGTGGAAAA TGGACGCTTC ATTAAGCAGC TCCTGGAAAC CTCCCCAGAC 
ATTCTTAGAG AATATCTTAT TCATCTACAA GAGCACATGG TAAATGTCAT TGCCGGTAGC 
ACTTCAGGGG CTCGAGACAT TCATGTCAAG ATAGAGTTCT TATTAATTAT TCTTACTGAT 
GTTTTTCATG TGTTGGACTT TATTCATCAT GACAAATTAT TTTATCTTTT GGCACGTTTT 
GGAACACTTA CCAGGGAAGT GTCAATTCTT GTTCGAGAAT TAGAAAAGAA CTCAAGGAAT 
GAAGAGAATA CCAATGGAAC AACTCGTGCT AATCTACACT TGCTGGAAAA TATAGAACTC 
CTCAAGGATG ATCTCAAACA GGTTTATCTG AAAGCCCCAG ACTCATCTCA ATGCTACTTT 
CCCATGAGTT ATGGACCTCT CTTCATGCAT TTGCTACACA GACACTTAAA TGATTTGCTA 
GATTCCAATG CTTATTCAAT TGTTTTGATA AAAGAAGAAA TTGGGCTGGT GAGAGAAGAT 
CTAGAATTCA TAACATCTTC CTTTGAGAAC ATTGATCACA GATTGTATAA AGATCTCTGG 
GAACGTGTTT TAGATGTAGC GTATGAGGCA AAAGATGTCA TTGATTCCAT TATTGTTCGA 
GATAATGGTC TCTTACATCT TATTTTCTCA CTTCCCCTTA CCATAAAGAA GATCAAGCTT 
ATCAAAGAAG AGGTCTCCGA TTTACATGAG AAGATTCCCA AGAACAGAGG CCTCATTGTT 
GTAAACTATC CCAAGAAGCT AGTTGAAAGC AAGTCATTGA CATCTGGTAA AATAACTGTA 
GGTTTTGAGG AGGAGACACA CTGGATAATC AATAAGCTCA CCAGCGGACT GAAAGATCTA 
GATGTCATTT CTATCACTGG TATGCCAGGT TCAGGTAAAA CTACTTTGGC GTACATAGTA 
TACAACGATG AGTCAATTTC TAGATGTTTT GACATTCGTG CATGGTGCAC AGTTGGCCAA 
GAATACGACA AAAAAAAGTT GTTGGAGAAA GTTTATAATC AAGTTACTGG CTCAGATTCA 
AAATTGAGTG AGAATATTGA TGTTACTGAT GACCTAAGAA GACACCTGAT TGGCAAGAGG 
TATCTTATTT TCTTAGATAA CTTGTGGGAT ACTGATGCAT GGGATAAGTT AAAAAGACCC 
TTTCCTCTGG GTGAGAATGG AAGTAGAATG ATTTTGACAA CTAGGAAAAT GGAAGTGGCT 
TTGAATGTAA AGTGCAACAT TGATCCTCTT AAGCTCCGGT TGCTAAGATC AGAAGAAAGT 
TGGGAATTAT TAGAGAAAAG GGCATTTGGA GAAGAGAGTT GCCCAGATGA ACTATTGGAT 
GTTGGAAAAG AAATAGCCAA AAATTGTAAG GGACTTCCAT TGGTGGCTGA TCTGATTGCT 
GGAGTCATTG CAGGGCGGGA AAAGAAAAAG ACTGTGTGGC TTGAAATTAG AAACAATTTG 
AATTCCTATA TTTTTGACAG TGAAGTTGAT GTGATGAAGG TTATAGCATT AAGTTATGAC 
CATTTACCAC ATCACCTGAA GCCATGCTTT CTATACCTTG CAAGTGTTCC GAAGTCTTCT 
GGGTTGAAAG TTAATTGGCC TGCTCAAGGA CTTGTGGAGC AGACAGAGAT GAAAGCATGG 
TTTATTTTGA CAATTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016576683.1
CDS	1..2598
Translation	MLTYRRSDHLDVVGYSDSNYASCVDTRKFTFGYLFLLAGGALLWKSAKQPVIATSTMEAEFVACFEATVQVSFSALRKDVVNILDIMERLKNEEDQKDVDMDNQIENLKFMLTFICTHVQLSYSGLEQFQATANAPTEVVENLFRPIWDDVENYFRCKYNMNQVLRSLMDNIDDCISSWHYSKSSVIMSEEQLDFLLLNLHHVYKFLAENKFPLVTEYQILRNVCDDMKDFYRMIVNGCVEHEIVEYVLPQLQPMAERLGLFLLDVLINKDAGVLKLVHLLLNIIPIELEVMHICFTNLNALTSVENGRFIKQLLETSPDILREYLIHLQEHMVNVIAGSTSGARDIHVKIEFLLIILTDVFHVLDFIHHDKLFYLLARFGTLTREVSILVRELEKNSRNEENTNGTTRANLHLLENIELLKDDLKQVYLKAPDSSQCYFPMSYGPLFMHLLHRHLNDLLDSNAYSIVLIKEEIGLVREDLEFITSSFENIDHRLYKDLWERVLDVAYEAKDVIDSIIVRDNGLLHLIFSLPLTIKKIKLIKEEVSDLHEKIPKNRGLIVVNYPKKLVESKSLTSGKITVGFEEETHWIINKLTSGLKDLDVISITGMPGSGKTTLAYIVYNDESISRCFDIRAWCTVGQEYDKKKLLEKVYNQVTGSDSKLSENIDVTDDLRRHLIGKRYLIFLDNLWDTDAWDKLKRPFPLGENGSRMILTTRKMEVALNVKCNIDPLKLRLLRSEESWELLEKRAFGEESCPDELLDVGKEIAKNCKGLPLVADLIAGVIAGREKKKTVWLEIRNNLNSYIFDSEVDVMKVIALSYDHLPHHLKPCFLYLASVPKSSGLKVNWPAQGLVEQTEMKAWFILTI

Target ORF information:

RefSeq Version	XM_016721197.1
Organism	Capsicum annuum
Definition	Capsicum annuum putative late blight resistance protein homolog R1B-16 (LOC107874408), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016721197.1

ORF Insert Sequence:

ATGCTCACTT ATAGAAGATC TGATCATCTA GATGTGGTTG GATATTCAGA TTCAAATTAT 
GCTAGTTGTG TGGATACAAG AAAATTCACA TTTGGATATT TATTTCTGTT AGCTGGAGGA 
GCACTATTAT GGAAGAGTGC GAAACAGCCT GTTATAGCTA CATCCACTAT GGAAGCTGAG 
TTTGTGGCAT GTTTTGAGGC CACAGTCCAG GTGTCATTTT CTGCTCTTCG CAAGGACGTT 
GTCAACATTC TTGATATCAT GGAGAGGTTA AAGAATGAAG AAGATCAAAA AGATGTTGAC 
ATGGACAATC AAATTGAAAA CCTGAAATTT ATGCTAACAT TTATATGTAC GCACGTCCAA 
CTTTCGTATT CCGGTTTGGA GCAGTTTCAA GCTACAGCGA ATGCTCCAAC AGAAGTGGTT 
GAGAATCTGT TTCGACCAAT ATGGGATGAT GTTGAAAACT ACTTCAGGTG TAAATACAAC 
ATGAATCAAG TCCTTCGTAG CCTCATGGAT AATATCGATG ATTGTATCAG CTCATGGCAT 
TATTCTAAAT CAAGTGTCAT CATGAGTGAG GAGCAATTGG ACTTCCTCCT CCTGAATCTC 
CATCACGTAT ACAAATTTCT TGCTGAGAAT AAGTTTCCAT TAGTGACAGA GTATCAGATT 
CTTCGGAATG TGTGTGACGA CATGAAAGAT TTCTATAGGA TGATAGTGAA TGGTTGTGTT 
GAGCACGAGA TTGTTGAATA TGTGTTACCT CAACTTCAAC CAATGGCTGA GAGACTTGGA 
CTCTTCCTTT TGGATGTGCT AATTAATAAA GACGCCGGAG TCCTCAAGCT AGTGCATCTA 
TTGTTGAATA TTATTCCAAT TGAACTGGAG GTGATGCACA TATGTTTTAC AAATTTGAAT 
GCTTTAACTT CTGTGGAAAA TGGACGCTTC ATTAAGCAGC TCCTGGAAAC CTCCCCAGAC 
ATTCTTAGAG AATATCTTAT TCATCTACAA GAGCACATGG TAAATGTCAT TGCCGGTAGC 
ACTTCAGGGG CTCGAGACAT TCATGTCAAG ATAGAGTTCT TATTAATTAT TCTTACTGAT 
GTTTTTCATG TGTTGGACTT TATTCATCAT GACAAATTAT TTTATCTTTT GGCACGTTTT 
GGAACACTTA CCAGGGAAGT GTCAATTCTT GTTCGAGAAT TAGAAAAGAA CTCAAGGAAT 
GAAGAGAATA CCAATGGAAC AACTCGTGCT AATCTACACT TGCTGGAAAA TATAGAACTC 
CTCAAGGATG ATCTCAAACA GGTTTATCTG AAAGCCCCAG ACTCATCTCA ATGCTACTTT 
CCCATGAGTT ATGGACCTCT CTTCATGCAT TTGCTACACA GACACTTAAA TGATTTGCTA 
GATTCCAATG CTTATTCAAT TGTTTTGATA AAAGAAGAAA TTGGGCTGGT GAGAGAAGAT 
CTAGAATTCA TAACATCTTC CTTTGAGAAC ATTGATCACA GATTGTATAA AGATCTCTGG 
GAACGTGTTT TAGATGTAGC GTATGAGGCA AAAGATGTCA TTGATTCCAT TATTGTTCGA 
GATAATGGTC TCTTACATCT TATTTTCTCA CTTCCCCTTA CCATAAAGAA GATCAAGCTT 
ATCAAAGAAG AGGTCTCCGA TTTACATGAG AAGATTCCCA AGAACAGAGG CCTCATTGTT 
GTAAACTATC CCAAGAAGCT AGTTGAAAGC AAGTCATTGA CATCTGGTAA AATAACTGTA 
GGTTTTGAGG AGGAGACACA CTGGATAATC AATAAGCTCA CCAGCGGACT GAAAGATCTA 
GATGTCATTT CTATCACTGG TATGCCAGGT TCAGGTAAAA CTACTTTGGC GTACATAGTA 
TACAACGATG AGTCAATTTC TAGATGTTTT GACATTCGTG CATGGTGCAC AGTTGGCCAA 
GAATACGACA AAAAAAAGTT GTTGGAGAAA GTTTATAATC AAGTTACTGG CTCAGATTCA 
AAATTGAGTG AGAATATTGA TGTTACTGAT GACCTAAGAA GACACCTGAT TGGCAAGAGG 
TATCTTATTT TCTTAGATAA CTTGTGGGAT ACTGATGCAT GGGATAAGTT AAAAAGACCC 
TTTCCTCTGG GTGAGAATGG AAGTAGAATG ATTTTGACAA CTAGGAAAAT GGAAGTGGCT 
TTGAATGTAA AGTGCAACAT TGATCCTCTT AAGCTCCGGT TGCTAAGATC AGAAGAAAGT 
TGGGAATTAT TAGAGAAAAG GGCATTTGGA GAAGAGAGTT GCCCAGATGA ACTATTGGAT 
GTTGGAAAAG AAATAGCCAA AAATTGTAAG GGACTTCCAT TGGTGGCTGA TCTGATTGCT 
GGAGTCATTG CAGGGCGGGA AAAGAAAAAG ACTGTGTGGC TTGAAATTAG AAACAATTTG 
AATTCCTATA TTTTTGACAG TGAAGTTGAT GTGATGAAGG TTATAGCATT AAGTTATGAC 
CATTTACCAC ATCACCTGAA GCCATGCTTT CTATACCTTG CAAGTGTTCC GAAGTCTTCT 
GGGTTGAAAG TTAATTGGCC TGCTCAAGGA CTTGTGGAGC AGACAGAGAT GAAAGCATGG 
TTTATTTTGA CAATTTGA