LOC107855193 cDNA ORF clone, Capsicum annuum

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107855193
Entrez Gene ID	107855193
Full Name	F-box protein At5g39450
Gene Type	protein-coding
Organism	Capsicum annuum

mRNA and Protein(s)

mRNA	Protein	Name
XM_016700186.1	XP_016555672.1	F-box protein At5g39450

Pathways from BioSystems
Gene Ontology

The following LOC107855193 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107855193 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa85507	XM_016700186.1 Latest version!	Capsicum annuum F-box protein At5g39450 (LOC107855193), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107855193 ( XM_016700186.1 ) cDNA ORF clone, Capsicum annuum -> XP_016555672.1 Capsicum annuum F-box protein At5g39450 (LOC107855193), mRNA.

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CloneID	OCa85507
Clone ID Related Accession (Same CDS sequence)	XM_016700186.1
Accession Version	XM_016700186.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1893bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	F-box protein At5g39450
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015961354.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTGCGGGA TTGGTACTAC TATTACTATG TTGCCTGACG TTTGTGGATG TAGCTTGATG 
TTAACACTGC CTGATGATGT GTTTGCGTTA GTAAGTAGAT CACTTACACC AAGGGATCTG 
TGTAATCTTG GTTTATGCTG TAGAAACTTG CATGATTTAG CTTCCTCTGA AAAGGTTTGG 
CTCCCACAAT GTGAGAGGCT CGGGGTGGTT CCTTATAGGG ACGTTATTGA ATGGCGAAAG 
GGGGTCTCTT CCTACAAGGC GCTTTGTCAC TTCCTTGTAA GCATTAAACC TTTGCTTGGT 
ATTTGGGTTC ATCAAAATCC TGAACTCGGG AATGTTGTAT ATGTTATGCC TGGTTTTATC 
TCTGCTGTTG GTTGTCGGAT CATTCCCCAA GAACTTGGTC CGTTAGGCCT TGAAGAAGGG 
CCAATTTTGT GGTCGCCTGT ATTTGAAGTT GTTTCTGATT TTGAGGGGTC TGCTGCATTT 
TTCCTGCATG GTAGGGAGAA TGGAACGGAC TATGTTTATC CTGGTTCGCT CAAGAAGGTC 
GAGAGGACTT GCAATGTGCT TCTGTTAGAG GTTGAGCCTC AGCAGCGCGG AAGTGGGGTT 
AAGTTGCTCC ACAGCAAGAG CTTTATTCAT CCTTCAGAGA ATGAGGCATC ACGGAAGATA 
TGCAGGTCCA ATAGTGGGGT TTCGTTGTCA GAAAGGGTAA TGGGACAGCA TGCAACCACA 
GTGCCGTTCG GTCGGCTTGC ATTTGTTGAT AGGAGAAAGT TGCTTGATAC AGTTACTAAC 
CAAGTTCGTC AAACACTGCC AGATGCTAAA GATGCCATAT TATTTCCTCG TTTGAGAAGA 
AAGGAGGCTG ATTTACGAGA GGATATGGAA CTTTTGTACG AAAGGAGATT TCTCTTTATG 
AAAATATGCG ATGATGGTGG TGGTTTTACT GTATGGAAGG CTGGTTCCGA GTTTCCTTTG 
CATCCTTCTC ATATTGGATT GAGTGAGTTC AGACAGAATC TTGATCTGAT AAGTGGCTGT 
CATGCATCAC AAACTGCTGC TGATCATGAG AGTCGGAGTC GGAAGACACT TGCTGAATAT 
GTTAGACACA GTCTAAAATA TATACTCAGG AAGTCAAACT CTATCAACAG CAAGCGTGAT 
CTTCTTAGGA AGAGTTCATC TGGCAATGGA AGTAAGCATG CCCAGCTTCA CGAGTTCCTG 
AAACCAGGTG ATACAATAGG GCTGACATTA CATGCTTCAA CTATGAAGTT ATCCTCTTAT 
CGTGCTTGGC CAAATATGCA CGACAGTAAA TTTGCTCTGT ACAAGTTGCC TATGCGGCCA 
CCGGAAGTGG GCCAAGAATA TGCTGGTGTA TGGGGAGGGA CTTTTGGTTG GCCCCCGGGG 
AGGCCTTCTG ATGATGATAA ACCTGGAAAA GCACTGTTTC TTCTTTTGCT GTCTTATGAG 
GAGTCCCAAG GGCAGAAGCT ACTTATCGCT ACCAAAATAT TAGAAGGTAC ACATTATGTT 
TTGCATCCTA ATGGCTCAGC TATGTTTATA GTGAACATTG AAGAGCCTTC GAACGATCCA 
TTCCCTTGGT CCACCGATGA ACATGATTCC AACACTCTAG ATGATGTCCA GCATGCTTTT 
ACGGGTGAAG GTATTGCTAA CGGGTATGGT TTCCGATATC CTGGTTCAAA ACCTGGTTCG 
CTCTATGTGA TCAACGATAA CCTGCTTGCT TTTATGTGGA AGGAGTCCCA GGCTGTATTG 
GCCTTGCAGA GGCTCGATTT GCAAGAGGTT TTGAGCAAGG GAGAAAGGAT TCCTCCTCTA 
CCTCCAGTTT CAAATTTTGC ATACCTTACC AGGTCCTATT CAAATGTGTT TGCCAATGGC 
CTGACTTCAC CAAGGCAGAA TCATCAGGGC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016555672.1
CDS	311..2203
Translation	MCGIGTTITMLPDVCGCSLMLTLPDDVFALVSRSLTPRDLCNLGLCCRNLHDLASSEKVWLPQCERLGVVPYRDVIEWRKGVSSYKALCHFLVSIKPLLGIWVHQNPELGNVVYVMPGFISAVGCRIIPQELGPLGLEEGPILWSPVFEVVSDFEGSAAFFLHGRENGTDYVYPGSLKKVERTCNVLLLEVEPQQRGSGVKLLHSKSFIHPSENEASRKICRSNSGVSLSERVMGQHATTVPFGRLAFVDRRKLLDTVTNQVRQTLPDAKDAILFPRLRRKEADLREDMELLYERRFLFMKICDDGGGFTVWKAGSEFPLHPSHIGLSEFRQNLDLISGCHASQTAADHESRSRKTLAEYVRHSLKYILRKSNSINSKRDLLRKSSSGNGSKHAQLHEFLKPGDTIGLTLHASTMKLSSYRAWPNMHDSKFALYKLPMRPPEVGQEYAGVWGGTFGWPPGRPSDDDKPGKALFLLLLSYEESQGQKLLIATKILEGTHYVLHPNGSAMFIVNIEEPSNDPFPWSTDEHDSNTLDDVQHAFTGEGIANGYGFRYPGSKPGSLYVINDNLLAFMWKESQAVLALQRLDLQEVLSKGERIPPLPPVSNFAYLTRSYSNVFANGLTSPRQNHQG

Target ORF information:

RefSeq Version	XM_016700186.1
Organism	Capsicum annuum
Definition	Capsicum annuum F-box protein At5g39450 (LOC107855193), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016700186.1

ORF Insert Sequence:

ATGTGCGGGA TTGGTACTAC TATTACTATG TTGCCTGACG TTTGTGGATG TAGCTTGATG 
TTAACACTGC CTGATGATGT GTTTGCGTTA GTAAGTAGAT CACTTACACC AAGGGATCTG 
TGTAATCTTG GTTTATGCTG TAGAAACTTG CATGATTTAG CTTCCTCTGA AAAGGTTTGG 
CTCCCACAAT GTGAGAGGCT CGGGGTGGTT CCTTATAGGG ACGTTATTGA ATGGCGAAAG 
GGGGTCTCTT CCTACAAGGC GCTTTGTCAC TTCCTTGTAA GCATTAAACC TTTGCTTGGT 
ATTTGGGTTC ATCAAAATCC TGAACTCGGG AATGTTGTAT ATGTTATGCC TGGTTTTATC 
TCTGCTGTTG GTTGTCGGAT CATTCCCCAA GAACTTGGTC CGTTAGGCCT TGAAGAAGGG 
CCAATTTTGT GGTCGCCTGT ATTTGAAGTT GTTTCTGATT TTGAGGGGTC TGCTGCATTT 
TTCCTGCATG GTAGGGAGAA TGGAACGGAC TATGTTTATC CTGGTTCGCT CAAGAAGGTC 
GAGAGGACTT GCAATGTGCT TCTGTTAGAG GTTGAGCCTC AGCAGCGCGG AAGTGGGGTT 
AAGTTGCTCC ACAGCAAGAG CTTTATTCAT CCTTCAGAGA ATGAGGCATC ACGGAAGATA 
TGCAGGTCCA ATAGTGGGGT TTCGTTGTCA GAAAGGGTAA TGGGACAGCA TGCAACCACA 
GTGCCGTTCG GTCGGCTTGC ATTTGTTGAT AGGAGAAAGT TGCTTGATAC AGTTACTAAC 
CAAGTTCGTC AAACACTGCC AGATGCTAAA GATGCCATAT TATTTCCTCG TTTGAGAAGA 
AAGGAGGCTG ATTTACGAGA GGATATGGAA CTTTTGTACG AAAGGAGATT TCTCTTTATG 
AAAATATGCG ATGATGGTGG TGGTTTTACT GTATGGAAGG CTGGTTCCGA GTTTCCTTTG 
CATCCTTCTC ATATTGGATT GAGTGAGTTC AGACAGAATC TTGATCTGAT AAGTGGCTGT 
CATGCATCAC AAACTGCTGC TGATCATGAG AGTCGGAGTC GGAAGACACT TGCTGAATAT 
GTTAGACACA GTCTAAAATA TATACTCAGG AAGTCAAACT CTATCAACAG CAAGCGTGAT 
CTTCTTAGGA AGAGTTCATC TGGCAATGGA AGTAAGCATG CCCAGCTTCA CGAGTTCCTG 
AAACCAGGTG ATACAATAGG GCTGACATTA CATGCTTCAA CTATGAAGTT ATCCTCTTAT 
CGTGCTTGGC CAAATATGCA CGACAGTAAA TTTGCTCTGT ACAAGTTGCC TATGCGGCCA 
CCGGAAGTGG GCCAAGAATA TGCTGGTGTA TGGGGAGGGA CTTTTGGTTG GCCCCCGGGG 
AGGCCTTCTG ATGATGATAA ACCTGGAAAA GCACTGTTTC TTCTTTTGCT GTCTTATGAG 
GAGTCCCAAG GGCAGAAGCT ACTTATCGCT ACCAAAATAT TAGAAGGTAC ACATTATGTT 
TTGCATCCTA ATGGCTCAGC TATGTTTATA GTGAACATTG AAGAGCCTTC GAACGATCCA 
TTCCCTTGGT CCACCGATGA ACATGATTCC AACACTCTAG ATGATGTCCA GCATGCTTTT 
ACGGGTGAAG GTATTGCTAA CGGGTATGGT TTCCGATATC CTGGTTCAAA ACCTGGTTCG 
CTCTATGTGA TCAACGATAA CCTGCTTGCT TTTATGTGGA AGGAGTCCCA GGCTGTATTG 
GCCTTGCAGA GGCTCGATTT GCAAGAGGTT TTGAGCAAGG GAGAAAGGAT TCCTCCTCTA 
CCTCCAGTTT CAAATTTTGC ATACCTTACC AGGTCCTATT CAAATGTGTT TGCCAATGGC 
CTGACTTCAC CAAGGCAGAA TCATCAGGGC TGA