LOC107843918 cDNA ORF clone, Capsicum annuum

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107843918
Entrez Gene ID	107843918
Full Name	probable disease resistance protein At1g12280
Gene Type	protein-coding
Organism	Capsicum annuum

mRNA and Protein(s)

mRNA	Protein	Name
XM_016688348.1	XP_016543834.1	LOW QUALITY PROTEIN: probable disease resistance protein At1g12280

Pathways from BioSystems
Gene Ontology

The following LOC107843918 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107843918 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa114592	XM_016688348.1 Latest version!	Capsicum annuum probable disease resistance protein At1g12280 (LOC107843918), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107843918 ( XM_016688348.1 ) cDNA ORF clone, Capsicum annuum -> XP_016543834.1 Capsicum annuum probable disease resistance protein At1g12280 (LOC107843918), mRNA.

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CloneID	OCa114592
Clone ID Related Accession (Same CDS sequence)	XM_016688348.1
Accession Version	XM_016688348.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3384bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	LOW QUALITY PROTEIN: probable disease resistance protein At1g12280
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029986.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END##

ATGGAATTCT TATCTACTAT TGTGGATAAA GTCGCAGAAT ACTTGATACT GCCAGTTGCG 
CGACAGATTG GGTATTTATT TTCCTATAGG TGCAACATCA GATCTTTAGA AAATGAATCT 
GAGAAGCTGG AGAATATCAG AAGCGGGGTG CAGCAAAGAA AGGATGCTGA ATGGAGAAAC 
TTACAAGTCA TGCCACCCCA TGTTGAGGAG TGGTTAACTA GTGTTGATGA AACTAATGCT 
GATGTGGCAG TTTTACTAGG ACGTAGAGTT GAGGTTGAAA GAGGTTGCAT CTATGGTTTG 
TGTCCAAACT TGAAGTCACG TTACTCGCTG AGCAGGAGAG CTAAGAAAAT TGAACAGGCT 
ATGATTGATC TTCAAACTGA AGGCAGAGGT TATGCTCCTT CCTCCTGTCC AGCACCACTT 
GCAGTTAAAG TTATAAATAG TGGTGAGGAG TTTGACTCCA GAAAACAGAA GGAGGAAGAG 
GTCATGGCAG CTTTGGGAGA TGAGGGGATC ACTATTGTTG GGATATGTGG TATGGGTGGT 
GTTGGTAAAA CAACACTGGC TGAGAAAGTA AGAGCATGGG CAAAACAAGC AGGGTTGTTT 
AATGATGTTG TCATGGTAAC TGTCAGTCAA CAACAAGACT TGAAAAGAAT TCAGGGAGAG 
ATCGCCAGAG AGGTTGGGCT GACATCGTTG CAAGGAGACA ATTTGTTAAG TCGTGGAGAT 
CAGCTGCGCG CAAGGTTAAT GCAGAAGGGA AGTCGCGTCC TTGTAATTTT GGATGATATT 
TGGGAGGCTC TTAATGATCT AGAGAAACTT GGTATTCCCA TTGGTAGCGA CCACAACTAT 
CAGTGCAAAG TGGCATTGAC GACACGCCTC CGAGGTGTTT GTGACGCTAT GGATGCTCAA 
AAGATCGTAG ATATTGGAAT TTTATCTGAT GAAGAAGCAT GGGTCCTTTT TAGTCAGAAA 
GCCGGTTATT CAGCTGACGA TCCCTCTCTT CCTGAAGTAG CAAAAGATGT TGCCAAAGAA 
TGCAAGGGTC TGCCACTTGC AATTGTTACT GTTGCAAGAG CACTAAAGGG TAAAACCAAG 
CCTTCATGGG AGGATGCGCT TGTAGAATTA CAAAAAGCAG CACCAAAAAA TATCCCAAGA 
GTGCTTACAA AGGTGTACCA ACCTCTAACA ATAAGCTATC ATCACTTAGA GAGTGATGAA 
GCCAGGTATG TGTTTTTGCT TTGTTCCTTG TTTGAAGAGG ATAGTAATAT TTGGACTGAA 
GAATTACTTA GATACGGAAT GGGACTTGAC ATCTTTTCAG AACTCGAAAA TTTAGAACAT 
GCCAGAAATA GGGTGTGTAA TCTGTTAGAA ACATTGAAAA ATTGTTTCTT GTTATCCCAA 
GGTTCAAACA AAAACTATGT CAAAATGCAT GATGTGGTCC GTGACGTGGC TATATTTATT 
GCGTCTGAGG GTGAGCATAA ATTTATGGTA AATCACAATA TGAACTCAAA CGAGTTCCCA 
AGAAAAGACT CTTACGAGCA TTACAGTCAC ATGTCAATTG TTGCAAATAA ATTTGATGAG 
GGTCCCAGAG CAATATCTTG TCCACGACTG AAGTTTCTGA TGTTAAAACT CCGTTTCGAA 
GAGGATTTCA AATTACAGGA TGATTTTTTT GATGGAATGA GTGAACTCAG TGTCATAAGC 
CTGAGTGGAT ATGATCAAAA CTCCATTCTG CCCTTTCCAT CATCCATTCA AAGGTTGTCA 
AATCTGAGGA CGCTATATCT GACTAATTTA AGATTGACTG ACATATCCAT TATTGGGGAA 
CGTGTCACTT TAGAAATTCT CAGCATCAGA TATTCTTACT TAGAGGAGTT TCCGGTGGAG 
ATAGGAAACT TGACCAATCT AACTATGTTA GAGTATAGGA ATACTAGTTA CAGAAACCGT 
ATGAGGATTT CACCAGGGGT CTTATCAAGA CTAGTTCGAT TGGAGGAACT GCATATGGTG 
AGAGTAGAAG ATTGTAGTTA CTCCATCTTG AGGGAACTGG AATCCTTATC GAGATTGACT 
GCACTGACAT TAGATGAATT CTCCGTAGAT GTGATTTACA GTAACTTGGG CCTTTCCTCC 
AAGTTGACTC GGTACGCTCT TACAGTGGGT GGATTCTACN ATGGCATGGA AACTTACGAC 
AAGATTATCG CTCTAGAGGT CACCGAGAGC ACCCCATTGG GTGATTGGAT CCGCCTCCTG 
TTGAGGAATA GCGAATTTGT ATTTTCAAGA GGAAAGGGCT CCAAGAATGT AGTGGTCGAT 
TTGCAGAACG TGAAAGATCT CAGGCTGGTT GATTGTGATT CATTGAATAT CCACTGTCAG 
AATAACATTC CATTTCCCAA ACTCGAAAGG CTGGAGGTAA GCTATTGTGA TCACCTACGT 
CATCTTTTTC GTGCGTCCTT GGCTTGCCCT GATGATGAAG AAGAGGGTAT CTCCCGAAGG 
ACACATATCA GACCTGACGT AATCAAGTTC CCCAATTTAT ATCACTTGGA ACTTGATGCT 
CTGGGATGCT TCACACACTT TTGCAGTGAC GCTGTTGAGG GCATTGAGTT CCCTCTGTTA 
CGGGAAATGT ATCTCGGGCG ATTATCAGAG TTCCAAAATT TCTGGCCAAG AGCCAACAAT 
GCAATCACCG ACTCAAATCC TCTTTTTAAT GAAAAGGTTT CTTGTCCCAA CCTGGAAGTA 
GTGGTAATTT ATGAATGCCA TGAAATGAAG ACATTTATCC AACAGGGAAC TGTGAGTACA 
CTGAATCTCG AAAGTGTGAA CAATGATGAT GAACTGAAAG TTATTGATCT CAACAAAGCG 
ATGTTCAATT CTAAGATTTC TTGTGCCATC CTGGAAAATC TATCTATCAA TGCGGCAAAC 
AACATAATTG CGCTATGCTC TCGCCAACTT CCAACTGCCT ACTTCAGCAA ACTTAAGGAA 
TTGACAGTAC GGAAGTGTGG AAAACTGAGA AACTTGATGT CTCCATCAGT GGCCAGGGGT 
CTTCTGAATC TCCGAACACT ATGGATAGCA GATTGCCAAT CAATGGAAGA AGTCATCACA 
GAAGATGAAC AACAACAAGA AGAAATCATG ACTAATGAGC CCTTATTTCC CGTGTTGGAA 
GGGTTGAAAC TCCGAAAGAT ACCAAAGCTG GGGCATTTCA TTCTGACGAA GCGTGCTCTT 
GAATTTCCAT TTCTCAGAGA AGTGGAGATT CGTAAATGCC CTGAAATGAA GACATTTGTC 
CAACAGGGAT CTGTCAGTAC ACCGAGTCTA AAAAGTGTGA ACAATGATGA TAAGGTGAAA 
GTAGATGACC TGAATGAATG GATACATCAG AGGTTCATTT CTAAGGAACA AGATGGAAGC 
GAATCTGAAG ATTCAATCGA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016543834.1
CDS	254..3637
Translation	MEFLSTIVDKVAEYLILPVARQIGYLFSYRCNIRSLENESEKLENIRSGVQQRKDAEWRNLQVMPPHVEEWLTSVDETNADVAVLLGRRVEVERGCIYGLCPNLKSRYSLSRRAKKIEQAMIDLQTEGRGYAPSSCPAPLAVKVINSGEEFDSRKQKEEEVMAALGDEGITIVGICGMGGVGKTTLAEKVRAWAKQAGLFNDVVMVTVSQQQDLKRIQGEIAREVGLTSLQGDNLLSRGDQLRARLMQKGSRVLVILDDIWEALNDLEKLGIPIGSDHNYQCKVALTTRLRGVCDAMDAQKIVDIGILSDEEAWVLFSQKAGYSADDPSLPEVAKDVAKECKGLPLAIVTVARALKGKTKPSWEDALVELQKAAPKNIPRVLTKVYQPLTISYHHLESDEARYVFLLCSLFEEDSNIWTEELLRYGMGLDIFSELENLEHARNRVCNLLETLKNCFLLSQGSNKNYVKMHDVVRDVAIFIASEGEHKFMVNHNMNSNEFPRKDSYEHYSHMSIVANKFDEGPRAISCPRLKFLMLKLRFEEDFKLQDDFFDGMSELSVISLSGYDQNSILPFPSSIQRLSNLRTLYLTNLRLTDISIIGERVTLEILSIRYSYLEEFPVEIGNLTNLTMLEYRNTSYRNRMRISPGVLSRLVRLEELHMVRVEDCSYSILRELESLSRLTALTLDEFSVDVIYSNLGLSSKLTRYALTVGGFYnullGMETYDKIIALEVTESTPLGDWIRLLLRNSEFVFSRGKGSKNVVVDLQNVKDLRLVDCDSLNIHCQNNIPFPKLERLEVSYCDHLRHLFRASLACPDDEEEGISRRTHIRPDVIKFPNLYHLELDALGCFTHFCSDAVEGIEFPLLREMYLGRLSEFQNFWPRANNAITDSNPLFNEKVSCPNLEVVVIYECHEMKTFIQQGTVSTLNLESVNNDDELKVIDLNKAMFNSKISCAILENLSINAANNIIALCSRQLPTAYFSKLKELTVRKCGKLRNLMSPSVARGLLNLRTLWIADCQSMEEVITEDEQQQEEIMTNEPLFPVLEGLKLRKIPKLGHFILTKRALEFPFLREVEIRKCPEMKTFVQQGSVSTPSLKSVNNDDKVKVDDLNEWIHQRFISKEQDGSESEDSIE

Target ORF information:

RefSeq Version	XM_016688348.1
Organism	Capsicum annuum
Definition	Capsicum annuum probable disease resistance protein At1g12280 (LOC107843918), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016688348.1

ORF Insert Sequence:

ATGGAATTCT TATCTACTAT TGTGGATAAA GTCGCAGAAT ACTTGATACT GCCAGTTGCG 
CGACAGATTG GGTATTTATT TTCCTATAGG TGCAACATCA GATCTTTAGA AAATGAATCT 
GAGAAGCTGG AGAATATCAG AAGCGGGGTG CAGCAAAGAA AGGATGCTGA ATGGAGAAAC 
TTACAAGTCA TGCCACCCCA TGTTGAGGAG TGGTTAACTA GTGTTGATGA AACTAATGCT 
GATGTGGCAG TTTTACTAGG ACGTAGAGTT GAGGTTGAAA GAGGTTGCAT CTATGGTTTG 
TGTCCAAACT TGAAGTCACG TTACTCGCTG AGCAGGAGAG CTAAGAAAAT TGAACAGGCT 
ATGATTGATC TTCAAACTGA AGGCAGAGGT TATGCTCCTT CCTCCTGTCC AGCACCACTT 
GCAGTTAAAG TTATAAATAG TGGTGAGGAG TTTGACTCCA GAAAACAGAA GGAGGAAGAG 
GTCATGGCAG CTTTGGGAGA TGAGGGGATC ACTATTGTTG GGATATGTGG TATGGGTGGT 
GTTGGTAAAA CAACACTGGC TGAGAAAGTA AGAGCATGGG CAAAACAAGC AGGGTTGTTT 
AATGATGTTG TCATGGTAAC TGTCAGTCAA CAACAAGACT TGAAAAGAAT TCAGGGAGAG 
ATCGCCAGAG AGGTTGGGCT GACATCGTTG CAAGGAGACA ATTTGTTAAG TCGTGGAGAT 
CAGCTGCGCG CAAGGTTAAT GCAGAAGGGA AGTCGCGTCC TTGTAATTTT GGATGATATT 
TGGGAGGCTC TTAATGATCT AGAGAAACTT GGTATTCCCA TTGGTAGCGA CCACAACTAT 
CAGTGCAAAG TGGCATTGAC GACACGCCTC CGAGGTGTTT GTGACGCTAT GGATGCTCAA 
AAGATCGTAG ATATTGGAAT TTTATCTGAT GAAGAAGCAT GGGTCCTTTT TAGTCAGAAA 
GCCGGTTATT CAGCTGACGA TCCCTCTCTT CCTGAAGTAG CAAAAGATGT TGCCAAAGAA 
TGCAAGGGTC TGCCACTTGC AATTGTTACT GTTGCAAGAG CACTAAAGGG TAAAACCAAG 
CCTTCATGGG AGGATGCGCT TGTAGAATTA CAAAAAGCAG CACCAAAAAA TATCCCAAGA 
GTGCTTACAA AGGTGTACCA ACCTCTAACA ATAAGCTATC ATCACTTAGA GAGTGATGAA 
GCCAGGTATG TGTTTTTGCT TTGTTCCTTG TTTGAAGAGG ATAGTAATAT TTGGACTGAA 
GAATTACTTA GATACGGAAT GGGACTTGAC ATCTTTTCAG AACTCGAAAA TTTAGAACAT 
GCCAGAAATA GGGTGTGTAA TCTGTTAGAA ACATTGAAAA ATTGTTTCTT GTTATCCCAA 
GGTTCAAACA AAAACTATGT CAAAATGCAT GATGTGGTCC GTGACGTGGC TATATTTATT 
GCGTCTGAGG GTGAGCATAA ATTTATGGTA AATCACAATA TGAACTCAAA CGAGTTCCCA 
AGAAAAGACT CTTACGAGCA TTACAGTCAC ATGTCAATTG TTGCAAATAA ATTTGATGAG 
GGTCCCAGAG CAATATCTTG TCCACGACTG AAGTTTCTGA TGTTAAAACT CCGTTTCGAA 
GAGGATTTCA AATTACAGGA TGATTTTTTT GATGGAATGA GTGAACTCAG TGTCATAAGC 
CTGAGTGGAT ATGATCAAAA CTCCATTCTG CCCTTTCCAT CATCCATTCA AAGGTTGTCA 
AATCTGAGGA CGCTATATCT GACTAATTTA AGATTGACTG ACATATCCAT TATTGGGGAA 
CGTGTCACTT TAGAAATTCT CAGCATCAGA TATTCTTACT TAGAGGAGTT TCCGGTGGAG 
ATAGGAAACT TGACCAATCT AACTATGTTA GAGTATAGGA ATACTAGTTA CAGAAACCGT 
ATGAGGATTT CACCAGGGGT CTTATCAAGA CTAGTTCGAT TGGAGGAACT GCATATGGTG 
AGAGTAGAAG ATTGTAGTTA CTCCATCTTG AGGGAACTGG AATCCTTATC GAGATTGACT 
GCACTGACAT TAGATGAATT CTCCGTAGAT GTGATTTACA GTAACTTGGG CCTTTCCTCC 
AAGTTGACTC GGTACGCTCT TACAGTGGGT GGATTCTACN ATGGCATGGA AACTTACGAC 
AAGATTATCG CTCTAGAGGT CACCGAGAGC ACCCCATTGG GTGATTGGAT CCGCCTCCTG 
TTGAGGAATA GCGAATTTGT ATTTTCAAGA GGAAAGGGCT CCAAGAATGT AGTGGTCGAT 
TTGCAGAACG TGAAAGATCT CAGGCTGGTT GATTGTGATT CATTGAATAT CCACTGTCAG 
AATAACATTC CATTTCCCAA ACTCGAAAGG CTGGAGGTAA GCTATTGTGA TCACCTACGT 
CATCTTTTTC GTGCGTCCTT GGCTTGCCCT GATGATGAAG AAGAGGGTAT CTCCCGAAGG 
ACACATATCA GACCTGACGT AATCAAGTTC CCCAATTTAT ATCACTTGGA ACTTGATGCT 
CTGGGATGCT TCACACACTT TTGCAGTGAC GCTGTTGAGG GCATTGAGTT CCCTCTGTTA 
CGGGAAATGT ATCTCGGGCG ATTATCAGAG TTCCAAAATT TCTGGCCAAG AGCCAACAAT 
GCAATCACCG ACTCAAATCC TCTTTTTAAT GAAAAGGTTT CTTGTCCCAA CCTGGAAGTA 
GTGGTAATTT ATGAATGCCA TGAAATGAAG ACATTTATCC AACAGGGAAC TGTGAGTACA 
CTGAATCTCG AAAGTGTGAA CAATGATGAT GAACTGAAAG TTATTGATCT CAACAAAGCG 
ATGTTCAATT CTAAGATTTC TTGTGCCATC CTGGAAAATC TATCTATCAA TGCGGCAAAC 
AACATAATTG CGCTATGCTC TCGCCAACTT CCAACTGCCT ACTTCAGCAA ACTTAAGGAA 
TTGACAGTAC GGAAGTGTGG AAAACTGAGA AACTTGATGT CTCCATCAGT GGCCAGGGGT 
CTTCTGAATC TCCGAACACT ATGGATAGCA GATTGCCAAT CAATGGAAGA AGTCATCACA 
GAAGATGAAC AACAACAAGA AGAAATCATG ACTAATGAGC CCTTATTTCC CGTGTTGGAA 
GGGTTGAAAC TCCGAAAGAT ACCAAAGCTG GGGCATTTCA TTCTGACGAA GCGTGCTCTT 
GAATTTCCAT TTCTCAGAGA AGTGGAGATT CGTAAATGCC CTGAAATGAA GACATTTGTC 
CAACAGGGAT CTGTCAGTAC ACCGAGTCTA AAAAGTGTGA ACAATGATGA TAAGGTGAAA 
GTAGATGACC TGAATGAATG GATACATCAG AGGTTCATTT CTAAGGAACA AGATGGAAGC 
GAATCTGAAG ATTCAATCGA GTGA