CAX1 cDNA ORF clone, Brassica rapa(field mustard)

Gene
Clones
gRNAs

Summary

Gene Symbol	CAX1
Entrez Gene ID	103837395
Full Name	calnexin homolog 1
Gene Type	protein-coding
Organism	Brassica rapa(field mustard)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009113754.2	XP_009112002.1	calnexin homolog 1

Pathways from BioSystems
Gene Ontology

The following CAX1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CAX1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBr166127	XM_009113754.2 Latest version!	Brassica rapa calnexin homolog 1 (CAX1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CAX1 ( XM_009113754.2 ) cDNA ORF clone, Brassica rapa(field mustard) -> XP_009112002.1 Brassica rapa calnexin homolog 1 (CAX1), mRNA.

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CloneID	OBr166127
Clone ID Related Accession (Same CDS sequence)	XM_009113754.2
Accession Version	XM_009113754.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1608bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-10-12
Organism	Brassica rapa(field mustard)
Product	calnexin homolog 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024803.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Oct 13, 2016 this sequence version replaced XM_009113754.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Brassica rapa Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATGAGAG ACCGGCAGCT ATTCTCCGCC GTTTTGCTTG TCTTAGCTTT CGTTTCTCTC 
CAGAAGCTTT GCTACTGCGA CGATCAAACG GTGTTGTATG AATCGTTCGA TGAGGCATTT 
GATGGCCGTT GGATCGTATC GAAGAATGGT GATTACGAAG GTGTGTGGAA GCATGAGAAG 
AGTGAAGGAC ATGATGACTA TGGACTCCTC GTGAGCGAGA AGGCTCGTAA GTACGGTATA 
GTTAAAGTTC TCGACGAGCC ACTAAACCTC AAGGACGGAA CCATTGTTCT TCAGTACGAG 
GTTCGTTTCC AGGAGGGGCT TGAGTGTGGT GGTGCTTACT TGAAGTACCT CCGTCCACAG 
GAAGCTGGAT GGACACCTGA GGGATTCGAT AGTGAATCTC CTTACTCCAT CATGTTTGGA 
CCCGACAAGT GTGGAGCTAC GAACAAAGTT CATTTCATTT TGAAGCACAA GAACCCCAAG 
AGCGGCGAGT ACGTTGAGCA CCATCTGAAG TTCCCTCCCT CTGTTCCTTA TGACAAGCTT 
TCCCATGTCT ACACCGCCAT CTTGAAGCCA GACAACGAGG TTAGAATCTT GGTTGATGGA 
GAGGAGAAGA AGAAGGCTAA CCTACTCTCT GGAGAGGACT TTGAGCCTGC TTTGATCCCT 
GACAAGACCA TCCCTGACCC TGAAGACAAG AAGCCAGAAG ACTGGGATGA GAGAGCCAAG 
ATCCCTGACC CTAACGCCGT GAAGCCTGAG GACTGGGACG AGGAAGCACC CATGGAGATA 
GAAGACGACG AAGCCGAGAA ACCCGAAGGA TGGTTAGACG ATGAGCCTGA GGAGGTGGAC 
GACCCAGAGG CGACCAACCC TGAAGATTGG GATGATGAGG AAGATGGTAT GTGGGAGGCA 
CCAAAGATTG ACAACCCCAA GTGTGAAGCA GCACCAGGAT GCGGTGAATG GAAGAGACCG 
ATGAAGAAAA ACCCAGCTTA CAAGGGCAAG TGGAGTGCAC CTATGATTGA TAACCCTGCT 
TACAAAGGAA TCTGGAAGCC CAGAGACATC CCTAACCCTG ACTACTTTGA GCTAGACAGA 
CCTGACTACG AGCCCATTGC AGCTATCGGT ATAGAGATCT GGACGATGCA AGACGGTATC 
TTGTTTGACA ACATTTTGAT AGCGAAAGAC GAGAAGGTCG CTGAGAGTTA CAGACAGACA 
ACGTGGAAGC CTAAGTTCGA TGTTGAGAAA GAGAAACAAA AGGAGGAAGA GAAGGCTGCT 
GAATCTGCAG ATGGTCTCAA GAGCTACCAG AAGGTTGTGT TCGATCTGTT GAACAAGGTT 
GCAGACATTT CCTTCCTAAG TGCCTACAAG TCCAAGATCA CAGAATTGAT TGAGAAAGCT 
GAGGAACAAC CAAACTTAAC CATTGGTGTC CTAGTCTCCA TTGTTATAGT ATTCTTCTCG 
CTCTTCATCA AGCTTATCTT CGGTGGCAAA AAGGCGTCGG CGGCGGCGGC GAGTGTGGAG 
AAGAAGAAAC CAGAAGTAGG AGAGAGCTCA AAGAGTGGAG ATGAGTCAGA GAAGAAGGAA 
GAAACCGCTG CTGCTCCCCG CAAAAGGCAA CCGAGACGTG ATAATTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009112002.1
CDS	81..1688
Translation	MMRDRQLFSAVLLVLAFVSLQKLCYCDDQTVLYESFDEAFDGRWIVSKNGDYEGVWKHEKSEGHDDYGLLVSEKARKYGIVKVLDEPLNLKDGTIVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPEGFDSESPYSIMFGPDKCGATNKVHFILKHKNPKSGEYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKANLLSGEDFEPALIPDKTIPDPEDKKPEDWDERAKIPDPNAVKPEDWDEEAPMEIEDDEAEKPEGWLDDEPEEVDDPEATNPEDWDDEEDGMWEAPKIDNPKCEAAPGCGEWKRPMKKNPAYKGKWSAPMIDNPAYKGIWKPRDIPNPDYFELDRPDYEPIAAIGIEIWTMQDGILFDNILIAKDEKVAESYRQTTWKPKFDVEKEKQKEEEKAAESADGLKSYQKVVFDLLNKVADISFLSAYKSKITELIEKAEEQPNLTIGVLVSIVIVFFSLFIKLIFGGKKASAAAASVEKKKPEVGESSKSGDESEKKEETAAAPRKRQPRRDN

Target ORF information:

RefSeq Version	XM_009113754.2
Organism	Brassica rapa(field mustard)
Definition	Brassica rapa calnexin homolog 1 (CAX1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009113754.2

ORF Insert Sequence:

ATGATGAGAG ACCGGCAGCT ATTCTCCGCC GTTTTGCTTG TCTTAGCTTT CGTTTCTCTC 
CAGAAGCTTT GCTACTGCGA CGATCAAACG GTGTTGTATG AATCGTTCGA TGAGGCATTT 
GATGGCCGTT GGATCGTATC GAAGAATGGT GATTACGAAG GTGTGTGGAA GCATGAGAAG 
AGTGAAGGAC ATGATGACTA TGGACTCCTC GTGAGCGAGA AGGCTCGTAA GTACGGTATA 
GTTAAAGTTC TCGACGAGCC ACTAAACCTC AAGGACGGAA CCATTGTTCT TCAGTACGAG 
GTTCGTTTCC AGGAGGGGCT TGAGTGTGGT GGTGCTTACT TGAAGTACCT CCGTCCACAG 
GAAGCTGGAT GGACACCTGA GGGATTCGAT AGTGAATCTC CTTACTCCAT CATGTTTGGA 
CCCGACAAGT GTGGAGCTAC GAACAAAGTT CATTTCATTT TGAAGCACAA GAACCCCAAG 
AGCGGCGAGT ACGTTGAGCA CCATCTGAAG TTCCCTCCCT CTGTTCCTTA TGACAAGCTT 
TCCCATGTCT ACACCGCCAT CTTGAAGCCA GACAACGAGG TTAGAATCTT GGTTGATGGA 
GAGGAGAAGA AGAAGGCTAA CCTACTCTCT GGAGAGGACT TTGAGCCTGC TTTGATCCCT 
GACAAGACCA TCCCTGACCC TGAAGACAAG AAGCCAGAAG ACTGGGATGA GAGAGCCAAG 
ATCCCTGACC CTAACGCCGT GAAGCCTGAG GACTGGGACG AGGAAGCACC CATGGAGATA 
GAAGACGACG AAGCCGAGAA ACCCGAAGGA TGGTTAGACG ATGAGCCTGA GGAGGTGGAC 
GACCCAGAGG CGACCAACCC TGAAGATTGG GATGATGAGG AAGATGGTAT GTGGGAGGCA 
CCAAAGATTG ACAACCCCAA GTGTGAAGCA GCACCAGGAT GCGGTGAATG GAAGAGACCG 
ATGAAGAAAA ACCCAGCTTA CAAGGGCAAG TGGAGTGCAC CTATGATTGA TAACCCTGCT 
TACAAAGGAA TCTGGAAGCC CAGAGACATC CCTAACCCTG ACTACTTTGA GCTAGACAGA 
CCTGACTACG AGCCCATTGC AGCTATCGGT ATAGAGATCT GGACGATGCA AGACGGTATC 
TTGTTTGACA ACATTTTGAT AGCGAAAGAC GAGAAGGTCG CTGAGAGTTA CAGACAGACA 
ACGTGGAAGC CTAAGTTCGA TGTTGAGAAA GAGAAACAAA AGGAGGAAGA GAAGGCTGCT 
GAATCTGCAG ATGGTCTCAA GAGCTACCAG AAGGTTGTGT TCGATCTGTT GAACAAGGTT 
GCAGACATTT CCTTCCTAAG TGCCTACAAG TCCAAGATCA CAGAATTGAT TGAGAAAGCT 
GAGGAACAAC CAAACTTAAC CATTGGTGTC CTAGTCTCCA TTGTTATAGT ATTCTTCTCG 
CTCTTCATCA AGCTTATCTT CGGTGGCAAA AAGGCGTCGG CGGCGGCGGC GAGTGTGGAG 
AAGAAGAAAC CAGAAGTAGG AGAGAGCTCA AAGAGTGGAG ATGAGTCAGA GAAGAAGGAA 
GAAACCGCTG CTGCTCCCCG CAAAAGGCAA CCGAGACGTG ATAATTAG