LOC108688582 cDNA ORF clone, Atta colombica

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108688582
Entrez Gene ID	108688582
Full Name	paired box protein Pax-3-B-like
Gene Type	protein-coding
Organism	Atta colombica

mRNA and Protein(s)

mRNA	Protein	Name
XM_018194892.1	XP_018050381.1	paired box protein Pax-3-B-like

Pathways from BioSystems
Gene Ontology

The following LOC108688582 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108688582 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAt86670	XM_018194892.1 Latest version!	Atta colombica paired box protein Pax-3-B-like (LOC108688582), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108688582 ( XM_018194892.1 ) cDNA ORF clone, Atta colombica -> XP_018050381.1 Atta colombica paired box protein Pax-3-B-like (LOC108688582), mRNA.

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CloneID	OAt86670
Clone ID Related Accession (Same CDS sequence)	XM_018194892.1
Accession Version	XM_018194892.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1965bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-18
Organism	Atta colombica
Product	paired box protein Pax-3-B-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017259334.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta colombica Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATGATCG GTGGCGGCGT TGCGACTCCT CCTGGTACTG CCAAGTCGGC GGCTGCGATC 
GACAGCGAAA TGGTACAGGT CGACGGCATT GGCAGTGGTA GTGTCAGTGG CAGTGCTAGT 
GGTAGTGGTA GCCCAGCAAC GGGTGCAATT ACCACGCGCC TCACGAACAA TAGCAGTAGC 
GGTACCAATA ATAATAACAA CAACAACAAT AATAATAATG GGGAGATTAG CAACAATAAT 
GACGGACACG GAGTCGCGAA TTGCACCGGT ACGACCGCTT CGAGCGCAAG TGACAAGTTC 
TGCTGTCAGG ACGAAGACGT TCCCGCCACC ACTGGTGTTG CCCGACCTTG GGAACCACCG 
TCGCCGACCT TCTCCCAGAC GAGATCGCAC TTACTACAGG TACATCCACC GCACCATCAC 
CAGCAGCATC CGGCGGCGCA TCATCACCAG CAGTTGAATG TACCTGTTTC CCTGATCGAT 
GGTGTGAATT TACAAAATTG TACAGCCGGT CCTTTCGCCA GTGGCAATAA TGGCAACGCA 
TCGCGGCAAC GTCTAATCGA ATTGTCACAT GGATTAGGAG CACTCAGGCA TTACAACGAT 
CTCGCCAACC ATGTGTTGTC ATTAAACCAA CAGGGCGCAG TCGTTACGAA ACTTTTAGGT 
ACGTTGCGCC CACCGGGTCT GATCGGTGGC AGTAAGCCGA AAGTAGCAAC ACCGGCTGTC 
GTCGCTAAGA TTGAACAATA TAAAAGGGAG AATCCAACTA TCTTTGCTTG GGAAATCCGG 
GAGAGGCTAA TTTCCGAAGG AGTTTGCAGT AATGCGACAG CGCCGTCGGT CAGCAGCATC 
AATCGAATAT TGCGGAACCG TGCGGCGGAA CGCGCGGCTG CGGAATTCGC GCGTGCCGCT 
GGTTACGGCC TGTACGCAGC CGCTGGGCCG CATCCGTACT TCAATTCTCA TCAGCATCCG 
ACGACGAGCC ATCATCTGCC GGCGGGCTGG CCGGCACCAG GAGCAGCTGG ACATCCATGG 
ATGCTGCCGC CTCTTGCTAC CGGTATATCC GGCGCCGCCG CGTCTGCTTT GCTTTTGCCA 
CCGTCCCTGA GTCCCGGTGC GGCCGCCGCC GCGGCCGCAG CCGCGTCCGC GTCCGCGGGC 
ACTTCCGAGC ATGCACTTCA TGCCGCCGAC GCGATTGCTC GTGGATATCT ACAAGATGGC 
GACGGCGATG ACGGAAGCTT AGACGGTTCA GAGCAGCCAA AGTTCCGGCG GAACCGCACG 
ACTTTCAGTC CGGAACAGCT CGAGGAACTC GAAAAGGAAT TCGAGAGATC GCATTATCCG 
TGTGTGTCTA CGCGCGAACG TCTCGCTTCG AAAACATCGC TCTCAGAAGC CCGCGTTCAG 
GTTTGGTTTT CCAACAGACG GGCAAAGTGG CGTCGTCACC AACGCATGAA CCTCTTAAAG 
CGCTCGCCAC CACCACCTCC ACCACCACCG CCGCAGCCGC AGCCGCAGCC GCAGCAACCG 
CACTCCGCTA CGTCCGCTAT GGAAATCGGC CAGCGTACGT CCAGCTGCTC CATCGCCGGC 
ATGGGCGGCG AAAGTAGCGC GTTCCGCGCG GTTGTCGCTA ATTCCGCAAC CAGGGACACC 
GGCCTCGACC GACCCGAGAG GATCGATAGG CACGAGTCGG TACCGAAGCA ACCAGAAAGG 
AAACCTAGCG CCTTCCGGAT GATCAGTCAA CTCGTAGGTG ACGATTCGTC CGGACTTTCG 
AGACCGACCA GTCCCGTGTA CGATCAGCGT CAATCGTCCG GTCTTGGTCC GCGTCCAGGA 
TCGGATACGA ACGCGCATAG GATACGCTAC GATCAGAACG AGGACGAAGA CGAGGAAATC 
GACGTTCAAG ACTCCGACCA GGATATACCG TCGTCGCCAC CGGTCGCTTG GAGAGATCAT 
TGGACTGACC AACAACCGTT GGAATTGACG AAGCATGATC GCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018050381.1
CDS	794..2758
Translation	MMIGGGVATPPGTAKSAAAIDSEMVQVDGIGSGSVSGSASGSGSPATGAITTRLTNNSSSGTNNNNNNNNNNNGEISNNNDGHGVANCTGTTASSASDKFCCQDEDVPATTGVARPWEPPSPTFSQTRSHLLQVHPPHHHQQHPAAHHHQQLNVPVSLIDGVNLQNCTAGPFASGNNGNASRQRLIELSHGLGALRHYNDLANHVLSLNQQGAVVTKLLGTLRPPGLIGGSKPKVATPAVVAKIEQYKRENPTIFAWEIRERLISEGVCSNATAPSVSSINRILRNRAAERAAAEFARAAGYGLYAAAGPHPYFNSHQHPTTSHHLPAGWPAPGAAGHPWMLPPLATGISGAAASALLLPPSLSPGAAAAAAAAASASAGTSEHALHAADAIARGYLQDGDGDDGSLDGSEQPKFRRNRTTFSPEQLEELEKEFERSHYPCVSTRERLASKTSLSEARVQVWFSNRRAKWRRHQRMNLLKRSPPPPPPPPPQPQPQPQQPHSATSAMEIGQRTSSCSIAGMGGESSAFRAVVANSATRDTGLDRPERIDRHESVPKQPERKPSAFRMISQLVGDDSSGLSRPTSPVYDQRQSSGLGPRPGSDTNAHRIRYDQNEDEDEEIDVQDSDQDIPSSPPVAWRDHWTDQQPLELTKHDR

Target ORF information:

RefSeq Version	XM_018194892.1
Organism	Atta colombica
Definition	Atta colombica paired box protein Pax-3-B-like (LOC108688582), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018194892.1

ORF Insert Sequence:

ATGATGATCG GTGGCGGCGT TGCGACTCCT CCTGGTACTG CCAAGTCGGC GGCTGCGATC 
GACAGCGAAA TGGTACAGGT CGACGGCATT GGCAGTGGTA GTGTCAGTGG CAGTGCTAGT 
GGTAGTGGTA GCCCAGCAAC GGGTGCAATT ACCACGCGCC TCACGAACAA TAGCAGTAGC 
GGTACCAATA ATAATAACAA CAACAACAAT AATAATAATG GGGAGATTAG CAACAATAAT 
GACGGACACG GAGTCGCGAA TTGCACCGGT ACGACCGCTT CGAGCGCAAG TGACAAGTTC 
TGCTGTCAGG ACGAAGACGT TCCCGCCACC ACTGGTGTTG CCCGACCTTG GGAACCACCG 
TCGCCGACCT TCTCCCAGAC GAGATCGCAC TTACTACAGG TACATCCACC GCACCATCAC 
CAGCAGCATC CGGCGGCGCA TCATCACCAG CAGTTGAATG TACCTGTTTC CCTGATCGAT 
GGTGTGAATT TACAAAATTG TACAGCCGGT CCTTTCGCCA GTGGCAATAA TGGCAACGCA 
TCGCGGCAAC GTCTAATCGA ATTGTCACAT GGATTAGGAG CACTCAGGCA TTACAACGAT 
CTCGCCAACC ATGTGTTGTC ATTAAACCAA CAGGGCGCAG TCGTTACGAA ACTTTTAGGT 
ACGTTGCGCC CACCGGGTCT GATCGGTGGC AGTAAGCCGA AAGTAGCAAC ACCGGCTGTC 
GTCGCTAAGA TTGAACAATA TAAAAGGGAG AATCCAACTA TCTTTGCTTG GGAAATCCGG 
GAGAGGCTAA TTTCCGAAGG AGTTTGCAGT AATGCGACAG CGCCGTCGGT CAGCAGCATC 
AATCGAATAT TGCGGAACCG TGCGGCGGAA CGCGCGGCTG CGGAATTCGC GCGTGCCGCT 
GGTTACGGCC TGTACGCAGC CGCTGGGCCG CATCCGTACT TCAATTCTCA TCAGCATCCG 
ACGACGAGCC ATCATCTGCC GGCGGGCTGG CCGGCACCAG GAGCAGCTGG ACATCCATGG 
ATGCTGCCGC CTCTTGCTAC CGGTATATCC GGCGCCGCCG CGTCTGCTTT GCTTTTGCCA 
CCGTCCCTGA GTCCCGGTGC GGCCGCCGCC GCGGCCGCAG CCGCGTCCGC GTCCGCGGGC 
ACTTCCGAGC ATGCACTTCA TGCCGCCGAC GCGATTGCTC GTGGATATCT ACAAGATGGC 
GACGGCGATG ACGGAAGCTT AGACGGTTCA GAGCAGCCAA AGTTCCGGCG GAACCGCACG 
ACTTTCAGTC CGGAACAGCT CGAGGAACTC GAAAAGGAAT TCGAGAGATC GCATTATCCG 
TGTGTGTCTA CGCGCGAACG TCTCGCTTCG AAAACATCGC TCTCAGAAGC CCGCGTTCAG 
GTTTGGTTTT CCAACAGACG GGCAAAGTGG CGTCGTCACC AACGCATGAA CCTCTTAAAG 
CGCTCGCCAC CACCACCTCC ACCACCACCG CCGCAGCCGC AGCCGCAGCC GCAGCAACCG 
CACTCCGCTA CGTCCGCTAT GGAAATCGGC CAGCGTACGT CCAGCTGCTC CATCGCCGGC 
ATGGGCGGCG AAAGTAGCGC GTTCCGCGCG GTTGTCGCTA ATTCCGCAAC CAGGGACACC 
GGCCTCGACC GACCCGAGAG GATCGATAGG CACGAGTCGG TACCGAAGCA ACCAGAAAGG 
AAACCTAGCG CCTTCCGGAT GATCAGTCAA CTCGTAGGTG ACGATTCGTC CGGACTTTCG 
AGACCGACCA GTCCCGTGTA CGATCAGCGT CAATCGTCCG GTCTTGGTCC GCGTCCAGGA 
TCGGATACGA ACGCGCATAG GATACGCTAC GATCAGAACG AGGACGAAGA CGAGGAAATC 
GACGTTCAAG ACTCCGACCA GGATATACCG TCGTCGCCAC CGGTCGCTTG GAGAGATCAT 
TGGACTGACC AACAACCGTT GGAATTGACG AAGCATGATC GCTGA