LOC102572325 cDNA ORF clone, Alligator mississippiensis(American alligator)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC102572325
Entrez Gene ID	102572325
Full Name	interferon-induced protein with tetratricopeptide repeats 2
Synonyms	IFIT5
Gene Type	protein-coding
Organism	Alligator mississippiensis(American alligator)

mRNA and Protein(s)

mRNA	Protein	Name
XM_019494874.1	XP_019350419.1	interferon-induced protein with tetratricopeptide repeats 2 isoform X1
XM_019494875.1	XP_019350420.1	interferon-induced protein with tetratricopeptide repeats 2 isoform X2

Pathways from BioSystems
Gene Ontology

The following LOC102572325 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC102572325 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAl65558	XM_019494874.1 Latest version!	Alligator mississippiensis interferon-induced protein with tetratricopeptide repeats 2 (LOC102572325), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OAl65559	XM_019494875.1 Latest version!	Alligator mississippiensis interferon-induced protein with tetratricopeptide repeats 2 (LOC102572325), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC102572325 ( XM_019494874.1 ) cDNA ORF clone, Alligator mississippiensis(American alligator) -> XP_019350419.1 Alligator mississippiensis interferon-induced protein with tetratricopeptide repeats 2 (LOC102572325), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OAl65558
Clone ID Related Accession (Same CDS sequence)	XM_019494874.1
Accession Version	XM_019494874.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1392bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-12-08
Organism	Alligator mississippiensis(American alligator)
Product	interferon-induced protein with tetratricopeptide repeats 2 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017711579.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Alligator mississippiensis Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCAGTGCC AGGGGCAGAG TCAGGCGCTT GCTGCCCAGC TGAGCTTGGA CCAGGACATG 
GGGGACCGGG ACGGTCTGCG GGACAGGCTG CAGGCGCTGC AGTGCCACTT TACCTGGGAC 
CTGGATGCCC CTGGCCAGCT CGAACCTGAG CACATCCTGT TGCGGCTGGC CGTGGAGATC 
CAGCACACGC CCCACCACAA CCAGGCCACG CTCCTGGCCC TGCGGGCGTT CCTCTGCCAG 
AGGCTGGGCC ACTACCCAGA TGCCCTGCAG AGCCTCCGGG ATGCTGAAGA GCAGCTGAGA 
CAGGATTTCC CAGACAGGTC CCCTGGGCGG GCCCTGCTGA TCTATGGCAA CTACGCCTGG 
GTGCACTACC ACATGCGCTC CCTCCATGAG GCCACGCGCT ACCTGGACCG CACCCAGGCG 
GCCCTCCTAG CCCCTCTGAG CACAGCTCTG ACTGCTGAGA TCTCCGCCCA GAAAGGCTGG 
TCTCTCCTGG CTGTTGGATT TCGTCATGGG GAGCGGGCCA GGCAGTGCTT CAAAGAGGCC 
CTAGTGCAGG ACCCAGGCAG CAAGGAGCTC CGCGCTGGGC TGGCCTTGGC CCTCTATGCT 
GCTTGGACCC ACTGCCCAAA TCCTGAGCTG AAGATGGAAG CAACAAGACA GATGGAAGAG 
GTTGTGCAGC AGCAGCCAGA GAACCGCAGG GCCAAGGTGC ATTTGGCCAG GCTGGTTCAA 
GATCAGGATC AGCAGAGGGC AGAGGCGCTG ATTGCAGAGG CTGTGGAGAG CAGCTCTGAC 
CCTGAAGTCA TTCGTCTGGC ATCCTTCTAC TTCCTGAAAA AAAATGCAGA GCGGTCCACA 
GAGATGCTGA AAGAAGCAAT TTCTCTGGAC CCTGATTACC ACCTCCTCTA CCACGCCTTG 
GCCAGGTCTT ACCGGGAGCA ATGGAAGACA GCAGAGGGGC AGAGGAAGGA GGAGCTGCTG 
CAGGCTGCGA TCAAGGCCCT GAAGAAAGAA GTCGCTCTCT ATTCAGGTGG TGTGCTCTCC 
AGGCTGCTGC TGGCTGAGCT GTATGGAGAG AAAGATCCAT GGCGGGAGGA GCAGATGTAC 
CTGAAGCTGG AGCAGGAGGC ACCCGGGTTT AGTCTGCAGT GCCGCCAGGC TCTGTGCCTA 
TACTTCGGGA GGTTCCTCAT TTACAAGAGG AGGGACCTGA AGGAAGCAGC CAAAAAGCTG 
CAGGCTGGCT ACGCCATCCC CATCGAGACA CAGGAGAGGC GGGAATGCCG CTGGCGCCTG 
GAGGTGATAG TTCACAAGCT CCAACAGTTT AACCAGCATG AGAAGGCAGT GGCCATCACC 
CACTTCCTGC AGGAAGCTGA CGGTGGGAAG CTGGCTGAGG GGGTCGGCGC TGCGGGGCAG 
GGGCACGAGT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019350419.1
CDS	113..1504
Translation	MQCQGQSQALAAQLSLDQDMGDRDGLRDRLQALQCHFTWDLDAPGQLEPEHILLRLAVEIQHTPHHNQATLLALRAFLCQRLGHYPDALQSLRDAEEQLRQDFPDRSPGRALLIYGNYAWVHYHMRSLHEATRYLDRTQAALLAPLSTALTAEISAQKGWSLLAVGFRHGERARQCFKEALVQDPGSKELRAGLALALYAAWTHCPNPELKMEATRQMEEVVQQQPENRRAKVHLARLVQDQDQQRAEALIAEAVESSSDPEVIRLASFYFLKKNAERSTEMLKEAISLDPDYHLLYHALARSYREQWKTAEGQRKEELLQAAIKALKKEVALYSGGVLSRLLLAELYGEKDPWREEQMYLKLEQEAPGFSLQCRQALCLYFGRFLIYKRRDLKEAAKKLQAGYAIPIETQERRECRWRLEVIVHKLQQFNQHEKAVAITHFLQEADGGKLAEGVGAAGQGHE

Target ORF information:

RefSeq Version	XM_019494874.1
Organism	Alligator mississippiensis(American alligator)
Definition	Alligator mississippiensis interferon-induced protein with tetratricopeptide repeats 2 (LOC102572325), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019494874.1

ORF Insert Sequence:

ATGCAGTGCC AGGGGCAGAG TCAGGCGCTT GCTGCCCAGC TGAGCTTGGA CCAGGACATG 
GGGGACCGGG ACGGTCTGCG GGACAGGCTG CAGGCGCTGC AGTGCCACTT TACCTGGGAC 
CTGGATGCCC CTGGCCAGCT CGAACCTGAG CACATCCTGT TGCGGCTGGC CGTGGAGATC 
CAGCACACGC CCCACCACAA CCAGGCCACG CTCCTGGCCC TGCGGGCGTT CCTCTGCCAG 
AGGCTGGGCC ACTACCCAGA TGCCCTGCAG AGCCTCCGGG ATGCTGAAGA GCAGCTGAGA 
CAGGATTTCC CAGACAGGTC CCCTGGGCGG GCCCTGCTGA TCTATGGCAA CTACGCCTGG 
GTGCACTACC ACATGCGCTC CCTCCATGAG GCCACGCGCT ACCTGGACCG CACCCAGGCG 
GCCCTCCTAG CCCCTCTGAG CACAGCTCTG ACTGCTGAGA TCTCCGCCCA GAAAGGCTGG 
TCTCTCCTGG CTGTTGGATT TCGTCATGGG GAGCGGGCCA GGCAGTGCTT CAAAGAGGCC 
CTAGTGCAGG ACCCAGGCAG CAAGGAGCTC CGCGCTGGGC TGGCCTTGGC CCTCTATGCT 
GCTTGGACCC ACTGCCCAAA TCCTGAGCTG AAGATGGAAG CAACAAGACA GATGGAAGAG 
GTTGTGCAGC AGCAGCCAGA GAACCGCAGG GCCAAGGTGC ATTTGGCCAG GCTGGTTCAA 
GATCAGGATC AGCAGAGGGC AGAGGCGCTG ATTGCAGAGG CTGTGGAGAG CAGCTCTGAC 
CCTGAAGTCA TTCGTCTGGC ATCCTTCTAC TTCCTGAAAA AAAATGCAGA GCGGTCCACA 
GAGATGCTGA AAGAAGCAAT TTCTCTGGAC CCTGATTACC ACCTCCTCTA CCACGCCTTG 
GCCAGGTCTT ACCGGGAGCA ATGGAAGACA GCAGAGGGGC AGAGGAAGGA GGAGCTGCTG 
CAGGCTGCGA TCAAGGCCCT GAAGAAAGAA GTCGCTCTCT ATTCAGGTGG TGTGCTCTCC 
AGGCTGCTGC TGGCTGAGCT GTATGGAGAG AAAGATCCAT GGCGGGAGGA GCAGATGTAC 
CTGAAGCTGG AGCAGGAGGC ACCCGGGTTT AGTCTGCAGT GCCGCCAGGC TCTGTGCCTA 
TACTTCGGGA GGTTCCTCAT TTACAAGAGG AGGGACCTGA AGGAAGCAGC CAAAAAGCTG 
CAGGCTGGCT ACGCCATCCC CATCGAGACA CAGGAGAGGC GGGAATGCCG CTGGCGCCTG 
GAGGTGATAG TTCACAAGCT CCAACAGTTT AACCAGCATG AGAAGGCAGT GGCCATCACC 
CACTTCCTGC AGGAAGCTGA CGGTGGGAAG CTGGCTGAGG GGGTCGGCGC TGCGGGGCAG 
GGGCACGAGT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC102572325 ( XM_019494875.1 ) cDNA ORF clone, Alligator mississippiensis(American alligator) -> XP_019350420.1 Alligator mississippiensis interferon-induced protein with tetratricopeptide repeats 2 (LOC102572325), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OAl65559
Clone ID Related Accession (Same CDS sequence)	XM_019494875.1
Accession Version	XM_019494875.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1362bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-12-08
Organism	Alligator mississippiensis(American alligator)
Product	interferon-induced protein with tetratricopeptide repeats 2 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017711579.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Alligator mississippiensis Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCAGTGCC AGGGGCAGAG TCAGGCGCTT GCTGCCCAGC TGAGCTTGGA CCAGGACATG 
GGGGACCGGG ACGGTCTGCG GGACAGGCTG CAGGCGCTGC AGTGCCACTT TACCTGGGAC 
CTGGATGCCC CTGGCCAGCT CGAACCTGAG CACATCCTGT TGCGGCTGGC CGTGGAGATC 
CAGCACACGC CCCACCACAA CCAGGCCACG CTCCTGGCCC TGCGGGCGTT CCTCTGCCAG 
AGGCTGGGCC ACTACCCAGA TGCCCTGCAG AGCCTCCGGG ATGCTGAAGA GCAGCTGAGA 
CAGGATTTCC CAGACAGGTC CCCTGGGCGG GCCCTGCTGA TCTATGGCAA CTACGCCTGG 
GTGCACTACC ACATGCGCTC CCTCCATGAG GCCACGCGCT ACCTGGACCG CACCCAGGCG 
GCCCTCCTAG CCCCTCTGAG CACAGCTCTG ACTGCTGAGA TCTCCGCCCA GAAAGGCTGG 
TCTCTCCTGG CTGTTGGATT TCGTCATGGG GAGCGGGCCA GGCAGTGCTT CAAAGAGGCC 
CTAGTGCAGG ACCCAGGCAG CAAGGAGCTC CGCGCTGGGC TGGCCTTGGC CCTCTATGCT 
GCTTGGACCC ACTGCCCAAA TCCTGAGCTG AAGATGGAAG CAACAAGACA GATGGAAGAG 
GTTGTGCAGC AGCAGCCAGA GAACCGCAGG GCCAAGGTGC ATTTGGCCAG GCTGGTTCAA 
GATCAGGATC AGCAGAGGGC AGAGGCGCTG ATTGCAGAGG CTGTGGAGAG CAGCTCTGAC 
CCTGAAGTCA TTCGTCTGGC ATCCTTCTAC TTCCTGAAAA AAAATGCAGA GCGGTCCACA 
GAGATGCTGA AAGAAGCAAT TTCTCTGGAC CCTGATTACC ACCTCCTCTA CCACGCCTTG 
GCCAGGTCTT ACCGGGAGCA ATGGAAGACA GCAGAGGGGC AGAGGAAGGA GGAGCTGCTG 
CAGGCTGCGA TCAAGGCCCT GAAGAAAGAA GTCGCTCTCT ATTCAGGTGG TGTGCTCTCC 
AGGCTGCTGC TGGCTGAGCT GTATGGAGAG AAAGATCCAT GGCGGGAGGA GCAGATGTAC 
CTGAAGCTGG AGCAGGAGGC ACCCGGGTTT AGTCTGCAGT GCCGCCAGGC TCTGTGCCTA 
TACTTCGGGA GGTTCCTCAT TTACAAGAGG AGGGACCTGA AGGAAGCAGC CAAAAAGCTG 
CAGGCTGGCT ACGCCATCCC CATCGAGACA CAGGAGAGGC GGGAATGCCG CTGGCGCCTG 
GAGGAAATGC TCTCCATCCC TCCAGTTTCA GACTTTCTAG ACCTCCAGCA ACCTTTTCTG 
TTGTCTGCTG GACGCTCTCC AATCCCTCCA TATCCTCTTT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019350420.1
CDS	113..1474
Translation	MQCQGQSQALAAQLSLDQDMGDRDGLRDRLQALQCHFTWDLDAPGQLEPEHILLRLAVEIQHTPHHNQATLLALRAFLCQRLGHYPDALQSLRDAEEQLRQDFPDRSPGRALLIYGNYAWVHYHMRSLHEATRYLDRTQAALLAPLSTALTAEISAQKGWSLLAVGFRHGERARQCFKEALVQDPGSKELRAGLALALYAAWTHCPNPELKMEATRQMEEVVQQQPENRRAKVHLARLVQDQDQQRAEALIAEAVESSSDPEVIRLASFYFLKKNAERSTEMLKEAISLDPDYHLLYHALARSYREQWKTAEGQRKEELLQAAIKALKKEVALYSGGVLSRLLLAELYGEKDPWREEQMYLKLEQEAPGFSLQCRQALCLYFGRFLIYKRRDLKEAAKKLQAGYAIPIETQERRECRWRLEEMLSIPPVSDFLDLQQPFLLSAGRSPIPPYPL

Target ORF information:

RefSeq Version	XM_019494875.1
Organism	Alligator mississippiensis(American alligator)
Definition	Alligator mississippiensis interferon-induced protein with tetratricopeptide repeats 2 (LOC102572325), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019494875.1

ORF Insert Sequence:

ATGCAGTGCC AGGGGCAGAG TCAGGCGCTT GCTGCCCAGC TGAGCTTGGA CCAGGACATG 
GGGGACCGGG ACGGTCTGCG GGACAGGCTG CAGGCGCTGC AGTGCCACTT TACCTGGGAC 
CTGGATGCCC CTGGCCAGCT CGAACCTGAG CACATCCTGT TGCGGCTGGC CGTGGAGATC 
CAGCACACGC CCCACCACAA CCAGGCCACG CTCCTGGCCC TGCGGGCGTT CCTCTGCCAG 
AGGCTGGGCC ACTACCCAGA TGCCCTGCAG AGCCTCCGGG ATGCTGAAGA GCAGCTGAGA 
CAGGATTTCC CAGACAGGTC CCCTGGGCGG GCCCTGCTGA TCTATGGCAA CTACGCCTGG 
GTGCACTACC ACATGCGCTC CCTCCATGAG GCCACGCGCT ACCTGGACCG CACCCAGGCG 
GCCCTCCTAG CCCCTCTGAG CACAGCTCTG ACTGCTGAGA TCTCCGCCCA GAAAGGCTGG 
TCTCTCCTGG CTGTTGGATT TCGTCATGGG GAGCGGGCCA GGCAGTGCTT CAAAGAGGCC 
CTAGTGCAGG ACCCAGGCAG CAAGGAGCTC CGCGCTGGGC TGGCCTTGGC CCTCTATGCT 
GCTTGGACCC ACTGCCCAAA TCCTGAGCTG AAGATGGAAG CAACAAGACA GATGGAAGAG 
GTTGTGCAGC AGCAGCCAGA GAACCGCAGG GCCAAGGTGC ATTTGGCCAG GCTGGTTCAA 
GATCAGGATC AGCAGAGGGC AGAGGCGCTG ATTGCAGAGG CTGTGGAGAG CAGCTCTGAC 
CCTGAAGTCA TTCGTCTGGC ATCCTTCTAC TTCCTGAAAA AAAATGCAGA GCGGTCCACA 
GAGATGCTGA AAGAAGCAAT TTCTCTGGAC CCTGATTACC ACCTCCTCTA CCACGCCTTG 
GCCAGGTCTT ACCGGGAGCA ATGGAAGACA GCAGAGGGGC AGAGGAAGGA GGAGCTGCTG 
CAGGCTGCGA TCAAGGCCCT GAAGAAAGAA GTCGCTCTCT ATTCAGGTGG TGTGCTCTCC 
AGGCTGCTGC TGGCTGAGCT GTATGGAGAG AAAGATCCAT GGCGGGAGGA GCAGATGTAC 
CTGAAGCTGG AGCAGGAGGC ACCCGGGTTT AGTCTGCAGT GCCGCCAGGC TCTGTGCCTA 
TACTTCGGGA GGTTCCTCAT TTACAAGAGG AGGGACCTGA AGGAAGCAGC CAAAAAGCTG 
CAGGCTGGCT ACGCCATCCC CATCGAGACA CAGGAGAGGC GGGAATGCCG CTGGCGCCTG 
GAGGAAATGC TCTCCATCCC TCCAGTTTCA GACTTTCTAG ACCTCCAGCA ACCTTTTCTG 
TTGTCTGCTG GACGCTCTCC AATCCCTCCA TATCCTCTTT GA