LOC102563262 cDNA ORF clone, Alligator mississippiensis(American alligator)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC102563262
Entrez Gene ID	102563262
Full Name	interferon kappa
Synonyms	IFNK
Gene Type	protein-coding
Organism	Alligator mississippiensis(American alligator)

mRNA and Protein(s)

mRNA	Protein	Name
XM_019480776.1	XP_019336321.1	interferon kappa isoform X2
XM_019480775.1	XP_019336320.1	interferon alpha-2 isoform X1

Pathways from BioSystems
Gene Ontology

The following LOC102563262 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC102563262 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAl79192	XM_019480775.1 Latest version!	Alligator mississippiensis interferon kappa (LOC102563262), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
OAl79193	XM_019480776.1 Latest version!	Alligator mississippiensis interferon kappa (LOC102563262), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$104.30 $149.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC102563262 ( XM_019480775.1 ) cDNA ORF clone, Alligator mississippiensis(American alligator) -> XP_019336320.1 Alligator mississippiensis interferon kappa (LOC102563262), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OAl79192
Clone ID Related Accession (Same CDS sequence)	XM_019480775.1
Accession Version	XM_019480775.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 675bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-12-08
Organism	Alligator mississippiensis(American alligator)
Product	interferon alpha-2 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017714378.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Alligator mississippiensis Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACCTGTT TTTGTTTGCT TCAGATGTTC TTCATACTGC TGTGCACCAT GCAAATCTCA 
ACTCCGGACT GTAATATTCC TTCTTTACAG CAAAGCAAAG CGATTCAGAG CAGTTTACAC 
CTTCTGGACA AAATAGGACA AGCATTTCCT CTGCAATGCA GACGTGAGCA TGTACTCTTC 
AAGTTTCCTC ACAACATTCT GAAGCTCAGT CAGAAAGACA ATGTCAAGGT GGCCGTTCAG 
GAAACACTCC AAAGCATCTT CTACATGTTT AGCAAAAATT TAACCTTAGC TGCCTGGGAT 
GGCAGATCCC TTGAAAGTTT CCAGAATGGA CTTTATCAAC AAATTGAGCA GCTAGAGGCA 
TGCTCAATTA AGAAGATAAA AAAGAAGCCA CAATATTTAA GGGATGTGGA AGCCAACAGA 
CTGAAACTGA AAAAATACTT TCAAAGGATA GACAACTTTC TAAAAGGCAA GCAATATAGC 
CTGTGTTCCT GGGAGATCAT CCGTGAGGAA GTGAGGAAAT GTCTTCAACT TATTGAGAAA 
GGACTAGAAG GCTTAGAAAA TAAGTTGTGG ATTCAAGCCA AAATCAAGAA CCTGCTAAAT 
GAACAAGATT CAAGAAGAGC AGATGTGAAA CAGAAACATC CAAAATGCAA AAGAAGGCAC 
CAGGACCTGA AATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019336320.1
CDS	78..752
Translation	MTCFCLLQMFFILLCTMQISTPDCNIPSLQQSKAIQSSLHLLDKIGQAFPLQCRREHVLFKFPHNILKLSQKDNVKVAVQETLQSIFYMFSKNLTLAAWDGRSLESFQNGLYQQIEQLEACSIKKIKKKPQYLRDVEANRLKLKKYFQRIDNFLKGKQYSLCSWEIIREEVRKCLQLIEKGLEGLENKLWIQAKIKNLLNEQDSRRADVKQKHPKCKRRHQDLK

Target ORF information:

RefSeq Version	XM_019480775.1
Organism	Alligator mississippiensis(American alligator)
Definition	Alligator mississippiensis interferon kappa (LOC102563262), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019480775.1

ORF Insert Sequence:

ATGACCTGTT TTTGTTTGCT TCAGATGTTC TTCATACTGC TGTGCACCAT GCAAATCTCA 
ACTCCGGACT GTAATATTCC TTCTTTACAG CAAAGCAAAG CGATTCAGAG CAGTTTACAC 
CTTCTGGACA AAATAGGACA AGCATTTCCT CTGCAATGCA GACGTGAGCA TGTACTCTTC 
AAGTTTCCTC ACAACATTCT GAAGCTCAGT CAGAAAGACA ATGTCAAGGT GGCCGTTCAG 
GAAACACTCC AAAGCATCTT CTACATGTTT AGCAAAAATT TAACCTTAGC TGCCTGGGAT 
GGCAGATCCC TTGAAAGTTT CCAGAATGGA CTTTATCAAC AAATTGAGCA GCTAGAGGCA 
TGCTCAATTA AGAAGATAAA AAAGAAGCCA CAATATTTAA GGGATGTGGA AGCCAACAGA 
CTGAAACTGA AAAAATACTT TCAAAGGATA GACAACTTTC TAAAAGGCAA GCAATATAGC 
CTGTGTTCCT GGGAGATCAT CCGTGAGGAA GTGAGGAAAT GTCTTCAACT TATTGAGAAA 
GGACTAGAAG GCTTAGAAAA TAAGTTGTGG ATTCAAGCCA AAATCAAGAA CCTGCTAAAT 
GAACAAGATT CAAGAAGAGC AGATGTGAAA CAGAAACATC CAAAATGCAA AAGAAGGCAC 
CAGGACCTGA AATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC102563262 ( XM_019480776.1 ) cDNA ORF clone, Alligator mississippiensis(American alligator) -> XP_019336321.1 Alligator mississippiensis interferon kappa (LOC102563262), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OAl79193
Clone ID Related Accession (Same CDS sequence)	XM_019480776.1
Accession Version	XM_019480776.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 585bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-12-08
Organism	Alligator mississippiensis(American alligator)
Product	interferon kappa isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017714378.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Alligator mississippiensis Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACCTGTT TTTGTTTGCT TCAGATGTTC TTCATACTGC TGTGCACCAT GCAAATCTCA 
ACTCCGGACT GTAATATTCC TTCTTTACAG CAAAGCAAAG CGATTCAGAG CAGTTTACAC 
CTTCTGGACA AAATAGGACA AGCATTTCCT CTGCAATGCA GACGTGAGCA TGTACTCTTC 
AAGTTTCCTC ACAACATTCT GAAGCTCAGT CAGAAAGACA ATGTCAAGGT GGCCGTTCAG 
GAAACACTCC AAAGCATCTT CTACATGTTT AGCAAAAATT TAACCTTAGC TGCCTGGGAT 
GGCAGATCCC TTGAAAGTTT CCAGAATGGA CTTTATCAAC AAATTGAGCA GCTAGAGGCA 
TGCTCAATTA AGAAGATAAA AAAGAAGCCA CAATATTTAA GGGATGTGGA AGCCAACAGA 
CTGAAACTGA AAAAATACTT TCAAAGGATA GACAACTTTC TAAAAGGCAA GCAATATAGC 
CTGTGTTCCT GGGAGATCAT CCGTGAGGAA GTGAGGAAAT GTCTTCAACT TATTGAGAAA 
GGACTAGAAG GCTTAGAAAA TAAGGCAGTT CAAGTTATCC AGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019336321.1
CDS	82..666
Translation	MTCFCLLQMFFILLCTMQISTPDCNIPSLQQSKAIQSSLHLLDKIGQAFPLQCRREHVLFKFPHNILKLSQKDNVKVAVQETLQSIFYMFSKNLTLAAWDGRSLESFQNGLYQQIEQLEACSIKKIKKKPQYLRDVEANRLKLKKYFQRIDNFLKGKQYSLCSWEIIREEVRKCLQLIEKGLEGLENKAVQVIQ

Target ORF information:

RefSeq Version	XM_019480776.1
Organism	Alligator mississippiensis(American alligator)
Definition	Alligator mississippiensis interferon kappa (LOC102563262), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019480776.1

ORF Insert Sequence:

ATGACCTGTT TTTGTTTGCT TCAGATGTTC TTCATACTGC TGTGCACCAT GCAAATCTCA 
ACTCCGGACT GTAATATTCC TTCTTTACAG CAAAGCAAAG CGATTCAGAG CAGTTTACAC 
CTTCTGGACA AAATAGGACA AGCATTTCCT CTGCAATGCA GACGTGAGCA TGTACTCTTC 
AAGTTTCCTC ACAACATTCT GAAGCTCAGT CAGAAAGACA ATGTCAAGGT GGCCGTTCAG 
GAAACACTCC AAAGCATCTT CTACATGTTT AGCAAAAATT TAACCTTAGC TGCCTGGGAT 
GGCAGATCCC TTGAAAGTTT CCAGAATGGA CTTTATCAAC AAATTGAGCA GCTAGAGGCA 
TGCTCAATTA AGAAGATAAA AAAGAAGCCA CAATATTTAA GGGATGTGGA AGCCAACAGA 
CTGAAACTGA AAAAATACTT TCAAAGGATA GACAACTTTC TAAAAGGCAA GCAATATAGC 
CTGTGTTCCT GGGAGATCAT CCGTGAGGAA GTGAGGAAAT GTCTTCAACT TATTGAGAAA 
GGACTAGAAG GCTTAGAAAA TAAGGCAGTT CAAGTTATCC AGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.