LOC105142933 cDNA ORF clone, Acromyrmex echinatior(Panamanian leafcutter ant)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105142933
Entrez Gene ID	105142933
Full Name	homeobox protein 5
Gene Type	protein-coding
Organism	Acromyrmex echinatior(Panamanian leafcutter ant)

mRNA and Protein(s)

mRNA	Protein	Name
XM_011050842.1	XP_011049144.1	homeobox protein 5

Pathways from BioSystems
Gene Ontology

The following LOC105142933 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105142933 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAc125395	XM_011050842.1 Latest version!	Acromyrmex echinatior homeobox protein 5 (LOC105142933), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105142933 ( XM_011050842.1 ) cDNA ORF clone, Acromyrmex echinatior(Panamanian leafcutter ant) -> XP_011049144.1 Acromyrmex echinatior homeobox protein 5 (LOC105142933), mRNA.

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CloneID	OAc125395
Clone ID Related Accession (Same CDS sequence)	XM_011050842.1
Accession Version	XM_011050842.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2862bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-01-12
Organism	Acromyrmex echinatior(Panamanian leafcutter ant)
Product	homeobox protein 5
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011626966.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Acromyrmex echinatior Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 12% of CDS bases ##RefSeq-Attributes-END##

ATGAGTAGAG AAAGATTAGT AGAGAATAAT GCAAACAAGA AAATACCATC GTCGAATGCA 
GTAGTAAACA ACATCGCTGG ATTTTACGAC AAGAATGTAA TGCAAAACGG ATATAACCCA 
AATTTGCAAA ACGGATATAA TCCAAATTTG CAAGACGGAT CTAATCCAAA TTTGCAAAAT 
GGATATAACC CAAATTTGCA AAATGAATAT AACTCAAATT TGCAAAACGG ATATAACCCA 
AATTTGCAAA ACGGATATGA TCCAAATTTG CAAGACGGAT CTAATCCAAA TTTGCAAAAC 
GGATATAACC CAAATTTGCA AAATGAATAT AACTCAAATT TGCAAAACGA ATATAACCCA 
AATTTGCAGA CCGGATATAC TCAACAAATC AACGATACGA ATTCAACAAA CTTATGGTGC 
CACAGCTTCG CTGGTGGTAG CAACAGTCTC GACAGTAGAA AGAATTTCCA TCCGTCGTTT 
CCTCCGACTT CGCAATTTTC CGAGCACCAG CAGGTATCGC AGTACAGCAA CAGTAACTAC 
CAGGTTGGGC CTCCATTTCA AGTCGCACGT CAACAATTAT CCAACCCCGA CGGTAACTTT 
CAGGGCTATC AAAATTCGTT GTACAATTCC GGGTGCCAGT CGTTGAATAA CACTACAAAC 
GTGTACGGTA CCAACGTCCA AAATTCGTCC GGCTATCACA ATCTTACATC ATCATCATCA 
TCTTTCAAAA ATATTTCGCC GGGACATACT GTATTAGCGC CGTCATTGAC GCAGACAAAC 
AACGCGCAGT CACAGCTACC TGGCTACGCG TGTTCCGAAA AGCACAAAGT TTGTATTGCC 
AACCCGTTCA CAACGACATT CACGACGTCG CCCACGTCGA CGAATAATAC GCGTAGCATC 
ACCGCTACCA ACGCGGCATC GACTGTCTCT AACGTGCCGT ATGAGCAGTT ACCGTTAACG 
TACAGTTCCT TAAACTTTTC AAGGAACAAG ACGGAGTTTA ACGGCGTAAG TCCTGAAGAG 
CGACAGCAGT CGTGTGGTGG ATCATCCTCG TCATCCCGAT TCATTCCGGT TACGAGATAT 
AACGTCACGG CGAACACACT GCATAGGAAT CCTTTTTCAG TCCTGTTGAA CACCAACGTA 
GGTACTAGCA GTAACAACGC CTGCGTGGAC AGGAACCGTT TCTTGAAAGA GCACTCCCTG 
AAGACGGCAG TGATAGAAGA ACAGCATAAG CTGCCACAAT CGCAGCAAGA ATCGCCGGTG 
ATACCACGTT ACAGGGCGAA CAACGCTAAT TTCTTCTTGG AAACGGGTCC AACGATAAAG 
GAACAGTCAT CCGCGATAGA TACAAACGTG GCTGATACCA TTGCTGCCCG TAATCGTAGC 
AATTTTAAAC AGCAATCGTT CTGCGCGGGA AGAAGCACCA GCGATCCATC GCTGGTAAAG 
CACGCGGCCC TGCCGCATTA TTTAGACAAC ATTTCGCCAA CATCGAACAT CGTATCGGAG 
ATGAAATACG AGACACAATC AGGACCACCG GCGGCACCGC CGCATCTGAC TTCATCTGGC 
GTTGAACCAC CTCATAGTAG CCAAGGTTCC GGGATCGTGG TGGGTAATTC GCCAGCTGAG 
ATTGATAGTT TGCTGTTACC ATGGACAAAT GGACCAGAGT TCCTGGAGGG AGGAGTCCCA 
GATGCAAAAC AGACGGCCGT TGGATTTCAA GATAACTGGG ATTCGATCCT GGCTACGACA 
GTCTCCGATC AGTCATTGCC GGACGTGAAG CTGCTCCCGC TTCCACCTTT TACCAATTAC 
ACGGGACATC TTCAAATCAA TGGCATCCCT GGGCATCACT ATCACACAAT AGCCTCGTCT 
GGTCAAAGAT CGTCGATTGA TGTGCCGTCT GCCTCCCCCA CACCATCCTC GAATCAAGAA 
TTTTTTGAGT CGCCTGTAGT GTCTTCTAGT ACTCCATGTC CGCAGGCGAG TCAGAAACAG 
TCGCAACAAC AACAGCAGCA ACAGCCACAG CAAAATCATC AACAACCGCA GCATCATCAT 
TCTCATAATC AACAGCAACA GCTGCCACAA TCCACGCAGC AAATAATTTA CGAGGATATG 
GACGATATAG CGCAGATCAT CGGATCTGCG ATAGCCGATA CGACGGTTCC AGGCAATGGA 
AATGGACCCA GTTCCGAGCA GGATACAGAC GCTTCAAGGG ATTGGATAGA CATCGCCGAT 
TGGATTACGG ATTGTTCACC TAAGACCCAA GAAACAACCT CGCCTAATAC GTTCGCGCAT 
CAAATTTATG TGACAACGAC TCCGACCACG CAGACGCAGC AACATGCTGG TTCGGCGTTG 
CAAAATTTGC TCACGCAAAA TCCCACTAAA CTTGATTACG CGCCCTTACT CCAGGCAAGG 
TTGCAACAGT CTGGAAACCC CACAAATTTA CAGAACGCTT CGTGTGGTGA AACCCCCTCG 
TCAACAAGCC CATTTCCACC GCTTAGCCCG CCTAATCGGG TATCTACATC TTGTAGTCCC 
GAGGATATTC TGCACTCGTC TTTTGCCACG CCCTCCCACC CCAGAAAGAG GTCACGATCC 
TCGCCAGGCT CTGGGGGCTC GCCCTCAAAG AAGGGTCCGA CAGCCGGTGC TGTGGGGGTA 
CAATATGGAA CGGAATCGAG TTTAATGAGT GGCAAGGATA AGCCAATACA TCGGTGTCAT 
ATCTGTCAAA GAGGTTTCCT AAATAAAAGC AATATTAAAG TACACCTGCG TACGCATACG 
GGTGAGAAAC CATTCAGATG CGATGTATGT AACAAAGCAT TCAGGCAAAA GGCACATCTT 
ATTAAACATC AGCAGATTCA CAAAAGAATT GGAAGGGATT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_011049144.1
CDS	1..2862
Translation	MSRERLVENNANKKIPSSNAVVNNIAGFYDKNVMQNGYNPNLQNGYNPNLQDGSNPNLQNGYNPNLQNEYNSNLQNGYNPNLQNGYDPNLQDGSNPNLQNGYNPNLQNEYNSNLQNEYNPNLQTGYTQQINDTNSTNLWCHSFAGGSNSLDSRKNFHPSFPPTSQFSEHQQVSQYSNSNYQVGPPFQVARQQLSNPDGNFQGYQNSLYNSGCQSLNNTTNVYGTNVQNSSGYHNLTSSSSSFKNISPGHTVLAPSLTQTNNAQSQLPGYACSEKHKVCIANPFTTTFTTSPTSTNNTRSITATNAASTVSNVPYEQLPLTYSSLNFSRNKTEFNGVSPEERQQSCGGSSSSSRFIPVTRYNVTANTLHRNPFSVLLNTNVGTSSNNACVDRNRFLKEHSLKTAVIEEQHKLPQSQQESPVIPRYRANNANFFLETGPTIKEQSSAIDTNVADTIAARNRSNFKQQSFCAGRSTSDPSLVKHAALPHYLDNISPTSNIVSEMKYETQSGPPAAPPHLTSSGVEPPHSSQGSGIVVGNSPAEIDSLLLPWTNGPEFLEGGVPDAKQTAVGFQDNWDSILATTVSDQSLPDVKLLPLPPFTNYTGHLQINGIPGHHYHTIASSGQRSSIDVPSASPTPSSNQEFFESPVVSSSTPCPQASQKQSQQQQQQQPQQNHQQPQHHHSHNQQQQLPQSTQQIIYEDMDDIAQIIGSAIADTTVPGNGNGPSSEQDTDASRDWIDIADWITDCSPKTQETTSPNTFAHQIYVTTTPTTQTQQHAGSALQNLLTQNPTKLDYAPLLQARLQQSGNPTNLQNASCGETPSSTSPFPPLSPPNRVSTSCSPEDILHSSFATPSHPRKRSRSSPGSGGSPSKKGPTAGAVGVQYGTESSLMSGKDKPIHRCHICQRGFLNKSNIKVHLRTHTGEKPFRCDVCNKAFRQKAHLIKHQQIHKRIGRD

Target ORF information:

RefSeq Version	XM_011050842.1
Organism	Acromyrmex echinatior(Panamanian leafcutter ant)
Definition	Acromyrmex echinatior homeobox protein 5 (LOC105142933), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_011050842.1

ORF Insert Sequence:

ATGAGTAGAG AAAGATTAGT AGAGAATAAT GCAAACAAGA AAATACCATC GTCGAATGCA 
GTAGTAAACA ACATCGCTGG ATTTTACGAC AAGAATGTAA TGCAAAACGG ATATAACCCA 
AATTTGCAAA ACGGATATAA TCCAAATTTG CAAGACGGAT CTAATCCAAA TTTGCAAAAT 
GGATATAACC CAAATTTGCA AAATGAATAT AACTCAAATT TGCAAAACGG ATATAACCCA 
AATTTGCAAA ACGGATATGA TCCAAATTTG CAAGACGGAT CTAATCCAAA TTTGCAAAAC 
GGATATAACC CAAATTTGCA AAATGAATAT AACTCAAATT TGCAAAACGA ATATAACCCA 
AATTTGCAGA CCGGATATAC TCAACAAATC AACGATACGA ATTCAACAAA CTTATGGTGC 
CACAGCTTCG CTGGTGGTAG CAACAGTCTC GACAGTAGAA AGAATTTCCA TCCGTCGTTT 
CCTCCGACTT CGCAATTTTC CGAGCACCAG CAGGTATCGC AGTACAGCAA CAGTAACTAC 
CAGGTTGGGC CTCCATTTCA AGTCGCACGT CAACAATTAT CCAACCCCGA CGGTAACTTT 
CAGGGCTATC AAAATTCGTT GTACAATTCC GGGTGCCAGT CGTTGAATAA CACTACAAAC 
GTGTACGGTA CCAACGTCCA AAATTCGTCC GGCTATCACA ATCTTACATC ATCATCATCA 
TCTTTCAAAA ATATTTCGCC GGGACATACT GTATTAGCGC CGTCATTGAC GCAGACAAAC 
AACGCGCAGT CACAGCTACC TGGCTACGCG TGTTCCGAAA AGCACAAAGT TTGTATTGCC 
AACCCGTTCA CAACGACATT CACGACGTCG CCCACGTCGA CGAATAATAC GCGTAGCATC 
ACCGCTACCA ACGCGGCATC GACTGTCTCT AACGTGCCGT ATGAGCAGTT ACCGTTAACG 
TACAGTTCCT TAAACTTTTC AAGGAACAAG ACGGAGTTTA ACGGCGTAAG TCCTGAAGAG 
CGACAGCAGT CGTGTGGTGG ATCATCCTCG TCATCCCGAT TCATTCCGGT TACGAGATAT 
AACGTCACGG CGAACACACT GCATAGGAAT CCTTTTTCAG TCCTGTTGAA CACCAACGTA 
GGTACTAGCA GTAACAACGC CTGCGTGGAC AGGAACCGTT TCTTGAAAGA GCACTCCCTG 
AAGACGGCAG TGATAGAAGA ACAGCATAAG CTGCCACAAT CGCAGCAAGA ATCGCCGGTG 
ATACCACGTT ACAGGGCGAA CAACGCTAAT TTCTTCTTGG AAACGGGTCC AACGATAAAG 
GAACAGTCAT CCGCGATAGA TACAAACGTG GCTGATACCA TTGCTGCCCG TAATCGTAGC 
AATTTTAAAC AGCAATCGTT CTGCGCGGGA AGAAGCACCA GCGATCCATC GCTGGTAAAG 
CACGCGGCCC TGCCGCATTA TTTAGACAAC ATTTCGCCAA CATCGAACAT CGTATCGGAG 
ATGAAATACG AGACACAATC AGGACCACCG GCGGCACCGC CGCATCTGAC TTCATCTGGC 
GTTGAACCAC CTCATAGTAG CCAAGGTTCC GGGATCGTGG TGGGTAATTC GCCAGCTGAG 
ATTGATAGTT TGCTGTTACC ATGGACAAAT GGACCAGAGT TCCTGGAGGG AGGAGTCCCA 
GATGCAAAAC AGACGGCCGT TGGATTTCAA GATAACTGGG ATTCGATCCT GGCTACGACA 
GTCTCCGATC AGTCATTGCC GGACGTGAAG CTGCTCCCGC TTCCACCTTT TACCAATTAC 
ACGGGACATC TTCAAATCAA TGGCATCCCT GGGCATCACT ATCACACAAT AGCCTCGTCT 
GGTCAAAGAT CGTCGATTGA TGTGCCGTCT GCCTCCCCCA CACCATCCTC GAATCAAGAA 
TTTTTTGAGT CGCCTGTAGT GTCTTCTAGT ACTCCATGTC CGCAGGCGAG TCAGAAACAG 
TCGCAACAAC AACAGCAGCA ACAGCCACAG CAAAATCATC AACAACCGCA GCATCATCAT 
TCTCATAATC AACAGCAACA GCTGCCACAA TCCACGCAGC AAATAATTTA CGAGGATATG 
GACGATATAG CGCAGATCAT CGGATCTGCG ATAGCCGATA CGACGGTTCC AGGCAATGGA 
AATGGACCCA GTTCCGAGCA GGATACAGAC GCTTCAAGGG ATTGGATAGA CATCGCCGAT 
TGGATTACGG ATTGTTCACC TAAGACCCAA GAAACAACCT CGCCTAATAC GTTCGCGCAT 
CAAATTTATG TGACAACGAC TCCGACCACG CAGACGCAGC AACATGCTGG TTCGGCGTTG 
CAAAATTTGC TCACGCAAAA TCCCACTAAA CTTGATTACG CGCCCTTACT CCAGGCAAGG 
TTGCAACAGT CTGGAAACCC CACAAATTTA CAGAACGCTT CGTGTGGTGA AACCCCCTCG 
TCAACAAGCC CATTTCCACC GCTTAGCCCG CCTAATCGGG TATCTACATC TTGTAGTCCC 
GAGGATATTC TGCACTCGTC TTTTGCCACG CCCTCCCACC CCAGAAAGAG GTCACGATCC 
TCGCCAGGCT CTGGGGGCTC GCCCTCAAAG AAGGGTCCGA CAGCCGGTGC TGTGGGGGTA 
CAATATGGAA CGGAATCGAG TTTAATGAGT GGCAAGGATA AGCCAATACA TCGGTGTCAT 
ATCTGTCAAA GAGGTTTCCT AAATAAAAGC AATATTAAAG TACACCTGCG TACGCATACG 
GGTGAGAAAC CATTCAGATG CGATGTATGT AACAAAGCAT TCAGGCAAAA GGCACATCTT 
ATTAAACATC AGCAGATTCA CAAAAGAATT GGAAGGGATT AG