LOC110525178 cDNA ORF clone, Oncorhynchus mykiss(rainbow trout)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC110525178
Entrez Gene ID	110525178
Full Name	uncharacterized LOC110525178
Gene Type	protein-coding
Organism	Oncorhynchus mykiss(rainbow trout)

mRNA and Protein(s)

mRNA	Protein	Name
XM_021605132.1	XP_021460807.1	uncharacterized protein LOC110525178

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches.
Salem M, Rexroad CE 3rd, Wang J, Thorgaard GH, Yao J
BMC genomics11564(2010 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC110525178 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC110525178 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OOf52403	XM_021605132.1 Latest version!	Oncorhynchus mykiss uncharacterized LOC110525178 (LOC110525178), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC110525178 ( XM_021605132.1 ) cDNA ORF clone, Oncorhynchus mykiss(rainbow trout) -> XP_021460807.1 Oncorhynchus mykiss uncharacterized LOC110525178 (LOC110525178), mRNA.

Price & Availability↑

CloneID	OOf52403
Clone ID Related Accession (Same CDS sequence)	XM_021605132.1
Accession Version	XM_021605132.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 960bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-26
Organism	Oncorhynchus mykiss(rainbow trout)
Product	uncharacterized protein LOC110525178
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_035077.1) and transcript sequence (EZ829717.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oncorhynchus mykiss Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 181 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGAAGAATG ATATCCTGGG TTTAAACTAT CCAGAAGATA GTGAAGTGAA GGATCCCCTG 
CCTCAGATCG AGCTGAAGGC TGTGACAAGG AGAAAAGTTA AGACCAAGAG GAAGACCAGT 
GCCAACAGGC CCACAGTTGA ACAGAGCACT GATACTGATG CAGCTGAGAT AGATTTTGTT 
GATAATCAGA ATGATGAAGA TGAGGATGAG GTGAAGAAGG ATCCCCTGCC TCAGATGGAG 
CCGGATGCCG TGAAGAGAAA TAAAGTCAAG ACCAAGAGGA CCAAGAGAAA CAAAGTGGAG 
CAGATCACTG ATACAGATGC AGGTCCCTCT ACATCTGTGG AATTCTCTGG GATGACAGTT 
CAGGGGACAT CTCACCAGGG ACAATCTAAT GAGTGTGTCT CCAGGGCCTG TCAGACCAGG 
GCTCTTGACC TCCCGCCAAT CAATCCGGAT GCTTTCAACC CGATTATCAT CCGGTTTCTG 
GAAAAACTTA CTGAGGAGCA ATGGAGGCAG TTAAGCATTG GCAGGATGGA CCCTGTGATG 
AGGGCATTGC TTGCAGAGAT GTGCCTGGAG ATTGTGCGGT TTGTATCTGA GGCCATCCTG 
GAGGTCATCA TCCCTGCAAT TTTCCGTTTT GTACGGATAT ACAGCCATGT GTCTCCAGTA 
TCCGGCAAGT CTCTGACAGA ATCAGAGAGA TCCTCTAGCA CAAACCTGAA GGTTCGCAAG 
AGAGGCAGCA GCAAATCCTC AAGGTCTTGC ACGGCCAAAT CAAGCTCCTC TCGTAATGGT 
GTACAAAGAA GGTCAACAAG AAGAACCACT GCATTCCAAC ACCTTCCCAG AACCAGACCC 
CTGCCGTCAG TGAAACAGCA ATTGTCAAAG ATCAAGAATC CTGCCAAACA GAGAGTGTAT 
GCTCCACCAA GAAGAAACCA AGGAAGCGTT CGCTCATTTC CAGGATGTTT TCAGCTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021460807.1
CDS	239..1198
Translation	MKNDILGLNYPEDSEVKDPLPQIELKAVTRRKVKTKRKTSANRPTVEQSTDTDAAEIDFVDNQNDEDEDEVKKDPLPQMEPDAVKRNKVKTKRTKRNKVEQITDTDAGPSTSVEFSGMTVQGTSHQGQSNECVSRACQTRALDLPPINPDAFNPIIIRFLEKLTEEQWRQLSIGRMDPVMRALLAEMCLEIVRFVSEAILEVIIPAIFRFVRIYSHVSPVSGKSLTESERSSSTNLKVRKRGSSKSSRSCTAKSSSSRNGVQRRSTRRTTAFQHLPRTRPLPSVKQQLSKIKNPAKQRVYAPPRRNQGSVRSFPGCFQL

Target ORF information:

RefSeq Version	XM_021605132.1
Organism	Oncorhynchus mykiss(rainbow trout)
Definition	Oncorhynchus mykiss uncharacterized LOC110525178 (LOC110525178), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021605132.1

ORF Insert Sequence:

ATGAAGAATG ATATCCTGGG TTTAAACTAT CCAGAAGATA GTGAAGTGAA GGATCCCCTG 
CCTCAGATCG AGCTGAAGGC TGTGACAAGG AGAAAAGTTA AGACCAAGAG GAAGACCAGT 
GCCAACAGGC CCACAGTTGA ACAGAGCACT GATACTGATG CAGCTGAGAT AGATTTTGTT 
GATAATCAGA ATGATGAAGA TGAGGATGAG GTGAAGAAGG ATCCCCTGCC TCAGATGGAG 
CCGGATGCCG TGAAGAGAAA TAAAGTCAAG ACCAAGAGGA CCAAGAGAAA CAAAGTGGAG 
CAGATCACTG ATACAGATGC AGGTCCCTCT ACATCTGTGG AATTCTCTGG GATGACAGTT 
CAGGGGACAT CTCACCAGGG ACAATCTAAT GAGTGTGTCT CCAGGGCCTG TCAGACCAGG 
GCTCTTGACC TCCCGCCAAT CAATCCGGAT GCTTTCAACC CGATTATCAT CCGGTTTCTG 
GAAAAACTTA CTGAGGAGCA ATGGAGGCAG TTAAGCATTG GCAGGATGGA CCCTGTGATG 
AGGGCATTGC TTGCAGAGAT GTGCCTGGAG ATTGTGCGGT TTGTATCTGA GGCCATCCTG 
GAGGTCATCA TCCCTGCAAT TTTCCGTTTT GTACGGATAT ACAGCCATGT GTCTCCAGTA 
TCCGGCAAGT CTCTGACAGA ATCAGAGAGA TCCTCTAGCA CAAACCTGAA GGTTCGCAAG 
AGAGGCAGCA GCAAATCCTC AAGGTCTTGC ACGGCCAAAT CAAGCTCCTC TCGTAATGGT 
GTACAAAGAA GGTCAACAAG AAGAACCACT GCATTCCAAC ACCTTCCCAG AACCAGACCC 
CTGCCGTCAG TGAAACAGCA ATTGTCAAAG ATCAAGAATC CTGCCAAACA GAGAGTGTAT 
GCTCCACCAA GAAGAAACCA AGGAAGCGTT CGCTCATTTC CAGGATGTTT TCAGCTATAG