LOC110992835 cDNA ORF clone, Pieris rapae(cabbage white)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC110992835
Entrez Gene ID	110992835
Full Name	uncharacterized LOC110992835
Gene Type	protein-coding
Organism	Pieris rapae(cabbage white)

mRNA and Protein(s)

mRNA	Protein	Name
XM_022258804.1	XP_022114496.1	uncharacterized protein LOC110992835

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Genomic adaptation to agricultural environments: cabbage white butterflies (Pieris rapae) as a case study.
Sikkink KL, Kobiela ME, Snell-Rood EC
BMC genomics18(1)412(2017 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC110992835 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC110992835 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPi77162	XM_022258804.1 Latest version!	Pieris rapae uncharacterized LOC110992835 (LOC110992835), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC110992835 ( XM_022258804.1 ) cDNA ORF clone, Pieris rapae(cabbage white) -> XP_022114496.1 Pieris rapae uncharacterized LOC110992835 (LOC110992835), mRNA.

Price & Availability↑

CloneID	OPi77162
Clone ID Related Accession (Same CDS sequence)	XM_022258804.1
Accession Version	XM_022258804.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1821bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-08-09
Organism	Pieris rapae(cabbage white)
Product	uncharacterized protein LOC110992835
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_019093240.1) and transcript sequence (GFMO01006708.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pieris rapae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 194 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGGAAGAGA GTGTAACAGA TATTATCTGT GACGTGAAAC CCTCGTGCTA CGAGCATCGG 
CAGCCACAGT TGCATCATCC TGTACGCCAA ACATCAACCA CACTAGAAAG AAGAATTCGC 
CACAGTAGAG ACCATACACC ACATTTCTTG CCCCGACTGA GCATAGTGCT GCCCCGGAGT 
AGTAGTTCCA GCGTTGAACA GCTTCCAGCA GAGTCCCGCC CACCGCGGTT GTCTCATGGA 
GACGAATCAA TGACTGTTGT GCTCTCTGCG TTTTATGCTA AACTATTGAT TGTAATTGGT 
TTAGCTCTGC CAGTAACAAG TACTATACAG AACGAATTGT CCACGAATAT TTCGTCAGAT 
GTATTCACAA TATATCTATA CACTACAAGT ATGCTTTTCC TGGCATACAC GTTTTACCAC 
CTTCGAGTAG CCAAAAGAAG AAGAGATGAA AACTTAATAC GTATACGTTA CGGAAGCTTT 
TACCTACATA TGGGTGTGGC GGGATTCAGC GTGGGGTCCA TAATTTATTC GTGCCTACAA 
TTTGGGGAGT ACTTTGATCT TTCAGGCGAT TGTCAACTGA TCATTGTCGC TTTAAAACCG 
GCTTTACGAA TACTTTTCAT GGTTGGACAG ACAATATTCA TTTTCTCATA CACAGACATT 
TTAGATCCAA TGCGAGGCGT GGTCCTAGAC AGATTCGGTC TCATGCACTT AATAGCTACA 
AATGTATGCG AATGGCTGAA CGTTGTAATA CAAGAAACAA GAGACGATAT CGTCGCGATC 
GCCTATAAAA AACCCGCATT CTTGAGACAA ACGAATGTGA CAACTTACTC TATAATTAAT 
GGGACAAACA TAACTACAGT TTGGACCTGC AATGTCTCTG ATATGATAAC ACCACTCATA 
AGGTCAATGA ACCCGTATTT AAGACCTTGT GGAGTTGAAT ACAGCCTTCT GTGCTCAATT 
ATTATAATGG TTATATGGAA TGACATTTGC ACCGTTCCCG GATCGAAAAC TGCTAAAGTG 
TCAAACAGTG GCGTAGACAA TAGATGTTGT GGTCGAGTAA AATCGAATTT GCATTTTTCT 
GTGGACTGCG GAAGTGCCCA TAAGGGACTA TTTATGGGTG TAGCAATACT TGCTGGGACG 
ATTGTCAGTC TGATGCTCTT CAATGGACTC TTTCAGAAGA AGGAACACGT TGAACTTGCC 
TTGTTACAGA TCAACATCTG GGAGACAATT TTATTCGTGA TAATGACACT TTCATCCGTA 
GCCTGCCTCT ATAGAATGCG TTCTTTGGCT TTGCGACAAG TAATCAACGC ACTGCCGCTA 
GAGCACGCGA TGTTGCTCGT AACACAATTC GGTGTCTATC TATATTATTT ATTTCAAATT 
ATTGGGGCTG CATTTCACTT ACATCAGTAC CCTGAAGCGA GAAGGGCCAC TAGAATTATA 
TCTCCACTAT GTGCAATTAT ACAAAGTTCT TGCCAGACCC TTCTAATCCT GGATGCATGG 
TCTCGACGCT GCACGAATTA TAAAAGGCGA CTTGGGAGAC AATTGGTGAC ATTCCTGTTG 
GTGGGAAACT TCGCGCTGTG GCTGCTAAAT CGTGTTAAAA ATGCAAGAGC TGAGTTTCAT 
CCTTTACAGA TGCAATTTTA TGGAGTTTGG GCTTGGACTC TAATCACTCA TGTCTCCGTG 
CCACTTTTAG TCTGCTATCG ATTTCAAGCG ACTGTCTGTT TCTATGAAAT ATGGAAAAAT 
TCCTATAAAA GAAGAAAAAA TACGGAATTG GACAATATTA TAATAACTGA TGATATTGAA 
TTAAAAAACC ATGTGGCCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_022114496.1
CDS	38..1858
Translation	MEESVTDIICDVKPSCYEHRQPQLHHPVRQTSTTLERRIRHSRDHTPHFLPRLSIVLPRSSSSSVEQLPAESRPPRLSHGDESMTVVLSAFYAKLLIVIGLALPVTSTIQNELSTNISSDVFTIYLYTTSMLFLAYTFYHLRVAKRRRDENLIRIRYGSFYLHMGVAGFSVGSIIYSCLQFGEYFDLSGDCQLIIVALKPALRILFMVGQTIFIFSYTDILDPMRGVVLDRFGLMHLIATNVCEWLNVVIQETRDDIVAIAYKKPAFLRQTNVTTYSIINGTNITTVWTCNVSDMITPLIRSMNPYLRPCGVEYSLLCSIIIMVIWNDICTVPGSKTAKVSNSGVDNRCCGRVKSNLHFSVDCGSAHKGLFMGVAILAGTIVSLMLFNGLFQKKEHVELALLQINIWETILFVIMTLSSVACLYRMRSLALRQVINALPLEHAMLLVTQFGVYLYYLFQIIGAAFHLHQYPEARRATRIISPLCAIIQSSCQTLLILDAWSRRCTNYKRRLGRQLVTFLLVGNFALWLLNRVKNARAEFHPLQMQFYGVWAWTLITHVSVPLLVCYRFQATVCFYEIWKNSYKRRKNTELDNIIITDDIELKNHVA

Target ORF information:

RefSeq Version	XM_022258804.1
Organism	Pieris rapae(cabbage white)
Definition	Pieris rapae uncharacterized LOC110992835 (LOC110992835), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_022258804.1

ORF Insert Sequence:

ATGGAAGAGA GTGTAACAGA TATTATCTGT GACGTGAAAC CCTCGTGCTA CGAGCATCGG 
CAGCCACAGT TGCATCATCC TGTACGCCAA ACATCAACCA CACTAGAAAG AAGAATTCGC 
CACAGTAGAG ACCATACACC ACATTTCTTG CCCCGACTGA GCATAGTGCT GCCCCGGAGT 
AGTAGTTCCA GCGTTGAACA GCTTCCAGCA GAGTCCCGCC CACCGCGGTT GTCTCATGGA 
GACGAATCAA TGACTGTTGT GCTCTCTGCG TTTTATGCTA AACTATTGAT TGTAATTGGT 
TTAGCTCTGC CAGTAACAAG TACTATACAG AACGAATTGT CCACGAATAT TTCGTCAGAT 
GTATTCACAA TATATCTATA CACTACAAGT ATGCTTTTCC TGGCATACAC GTTTTACCAC 
CTTCGAGTAG CCAAAAGAAG AAGAGATGAA AACTTAATAC GTATACGTTA CGGAAGCTTT 
TACCTACATA TGGGTGTGGC GGGATTCAGC GTGGGGTCCA TAATTTATTC GTGCCTACAA 
TTTGGGGAGT ACTTTGATCT TTCAGGCGAT TGTCAACTGA TCATTGTCGC TTTAAAACCG 
GCTTTACGAA TACTTTTCAT GGTTGGACAG ACAATATTCA TTTTCTCATA CACAGACATT 
TTAGATCCAA TGCGAGGCGT GGTCCTAGAC AGATTCGGTC TCATGCACTT AATAGCTACA 
AATGTATGCG AATGGCTGAA CGTTGTAATA CAAGAAACAA GAGACGATAT CGTCGCGATC 
GCCTATAAAA AACCCGCATT CTTGAGACAA ACGAATGTGA CAACTTACTC TATAATTAAT 
GGGACAAACA TAACTACAGT TTGGACCTGC AATGTCTCTG ATATGATAAC ACCACTCATA 
AGGTCAATGA ACCCGTATTT AAGACCTTGT GGAGTTGAAT ACAGCCTTCT GTGCTCAATT 
ATTATAATGG TTATATGGAA TGACATTTGC ACCGTTCCCG GATCGAAAAC TGCTAAAGTG 
TCAAACAGTG GCGTAGACAA TAGATGTTGT GGTCGAGTAA AATCGAATTT GCATTTTTCT 
GTGGACTGCG GAAGTGCCCA TAAGGGACTA TTTATGGGTG TAGCAATACT TGCTGGGACG 
ATTGTCAGTC TGATGCTCTT CAATGGACTC TTTCAGAAGA AGGAACACGT TGAACTTGCC 
TTGTTACAGA TCAACATCTG GGAGACAATT TTATTCGTGA TAATGACACT TTCATCCGTA 
GCCTGCCTCT ATAGAATGCG TTCTTTGGCT TTGCGACAAG TAATCAACGC ACTGCCGCTA 
GAGCACGCGA TGTTGCTCGT AACACAATTC GGTGTCTATC TATATTATTT ATTTCAAATT 
ATTGGGGCTG CATTTCACTT ACATCAGTAC CCTGAAGCGA GAAGGGCCAC TAGAATTATA 
TCTCCACTAT GTGCAATTAT ACAAAGTTCT TGCCAGACCC TTCTAATCCT GGATGCATGG 
TCTCGACGCT GCACGAATTA TAAAAGGCGA CTTGGGAGAC AATTGGTGAC ATTCCTGTTG 
GTGGGAAACT TCGCGCTGTG GCTGCTAAAT CGTGTTAAAA ATGCAAGAGC TGAGTTTCAT 
CCTTTACAGA TGCAATTTTA TGGAGTTTGG GCTTGGACTC TAATCACTCA TGTCTCCGTG 
CCACTTTTAG TCTGCTATCG ATTTCAAGCG ACTGTCTGTT TCTATGAAAT ATGGAAAAAT 
TCCTATAAAA GAAGAAAAAA TACGGAATTG GACAATATTA TAATAACTGA TGATATTGAA 
TTAAAAAACC ATGTGGCCTA A