LOC107428172 cDNA ORF clone, Ziziphus jujuba(common jujube)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107428172
Entrez Gene ID	107428172
Full Name	4-coumarate--CoA ligase 1
Gene Type	protein-coding
Organism	Ziziphus jujuba(common jujube)

mRNA and Protein(s)

mRNA	Protein	Name
XM_016038646.1	XP_015894132.1	4-coumarate--CoA ligase 1
XM_016038646.2	XP_015894132.2	LOW QUALITY PROTEIN: 4-coumarate--CoA ligase 1

Pathways from BioSystems
Gene Ontology

The following LOC107428172 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107428172 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OZi19489	XM_016038646.1 Latest version!	Ziziphus jujuba 4-coumarate--CoA ligase 1 (LOC107428172), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OZi33568	XM_016038646.2 Latest version!	Ziziphus jujuba 4-coumarate--CoA ligase 1 (LOC107428172), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107428172 ( XM_016038646.1 ) cDNA ORF clone, Ziziphus jujuba(common jujube) -> XP_015894132.1 Ziziphus jujuba 4-coumarate--CoA ligase 1 (LOC107428172), mRNA.

Price & Availability↑

CloneID	OZi19489
Clone ID Related Accession (Same CDS sequence)	XM_016038646.1
Accession Version	XM_016038646.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1389bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-03-23
Organism	Ziziphus jujuba(common jujube)
Product	4-coumarate--CoA ligase 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015453186.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ziziphus jujuba Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END##

ATGGCGGTCA CCGAAAAGAA ACAACAAACA GACATCATTT TCAGGTCGAG ACTTCCCGAT 
ATCTATATCC CCAAACACCT TCCTCTCCAC ACCTATTGCT TCCAGAACAA GCAGTCTCCT 
GAGCACGCCT CTCGTCCTTG CCTCATCAAT GGCGTCACGG GCCAAGTCTA TTCCTACGCC 
CAAGTCGAGC TCACCGCTCG CAAAGTTGCC GCCGGATTAA ACCGTCTCGG AGTCCGACAA 
GGCCACGTGA TCATGGTTCT GCTCCCGAAC TCGCCGGAAT TCGTCCTCGC ATTCCTTGGC 
GCGTCGTTCC GCGGGGCGAT GACCACGGCG GCGAATCCTT TCTTCACTCC CGCCGAGATC 
TTGAAACAAG CCAAAGCTTC CAAGGCGAGG CTGATTATAA CGCAAGCTGC TTATTACGAC 
AAAGTGAAGG ATTATCTGGA AGTACAAAAC GATGCTAAAA TCGTCACCGT CGATTCGCCT 
CCCGAAGGCT GCTTGCATTT CTCGGAATTA AGTCAGTCCG ACGAAAACGA CTTGCCGGAT 
GTGGATATTC AACCCGACGA CGTCGTCGCG CTGCCGTACT CGTCCGGAAC GACAGGATTG 
CCGAAGGGAG TGATGCTGAC GCACAAGGGA CTAGTTACCA GCGTGGCCCA ACAAGTCGAC 
GGAGAGAACC CGAACCTGTA TTACGATAAA GACGATGTCG TTTTGTGCGT TTTGCCTCTC 
TTCCATATTT ATTCGTTGAA CTCTGTTTTG CTCTGCGCGC TACGAGCCGG AGCCGCCATT 
TTGATAATGC CTAAATTTGA GATCGGCTTG CTCTTGAAGC TGATCGAGAA ACATAGAGTG 
AGCGTGGCAC CGATTGTGCC GCCGATTGTT TTGGCTATTT CCAAGTATCC TGAGCTTGAT 
AAATACGACT TGTCGTCTTT GAGAGTTCTC AAGTCTGGTG GTGCTCCACT GGGTAAGGAG 
CTTGAAGACA GTGTCAGATG CAAGTTTCCA AATGTGACGC TGGGCCAGGG ATATGGAATG 
ACAGAAGCAG GGCCGGTGTT GACAATGTCA TTGGCATTTG CAAAGAAACC ATTTGAAGTG 
AAAGCAGGAG GGTGTGGAAC TGTTGTTAGA AATGCAGAAT TAAAGATCGT TGACCCTGAA 
TCTGGTTCTT CTTTACCAAG AAACCAGCCT GGAGAGATTT GCATTCGTGG TGACCAAATC 
ATGAAAGGTT ATCTTAACGA TCCAGAGGCT ACAAAGAGAA CCATAGACGA TGAAGGTTGG 
TTGCATACCG GAGATATTGG ATTGGTCGAT GATGATGATG AGCTCTTCAT TGTTGATAGG 
TTAAAAGAAC TCATCAAATA CAAAGGGTTT CAGGTTGCCC CTGCTGAACT TGAAGCTCTT 
GTACTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015894132.1
CDS	137..1525
Translation	MAVTEKKQQTDIIFRSRLPDIYIPKHLPLHTYCFQNKQSPEHASRPCLINGVTGQVYSYAQVELTARKVAAGLNRLGVRQGHVIMVLLPNSPEFVLAFLGASFRGAMTTAANPFFTPAEILKQAKASKARLIITQAAYYDKVKDYLEVQNDAKIVTVDSPPEGCLHFSELSQSDENDLPDVDIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYYDKDDVVLCVLPLFHIYSLNSVLLCALRAGAAILIMPKFEIGLLLKLIEKHRVSVAPIVPPIVLAISKYPELDKYDLSSLRVLKSGGAPLGKELEDSVRCKFPNVTLGQGYGMTEAGPVLTMSLAFAKKPFEVKAGGCGTVVRNAELKIVDPESGSSLPRNQPGEICIRGDQIMKGYLNDPEATKRTIDDEGWLHTGDIGLVDDDDELFIVDRLKELIKYKGFQVAPAELEALVL

Target ORF information:

RefSeq Version	XM_016038646.1
Organism	Ziziphus jujuba(common jujube)
Definition	Ziziphus jujuba 4-coumarate--CoA ligase 1 (LOC107428172), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016038646.1

ORF Insert Sequence:

ATGGCGGTCA CCGAAAAGAA ACAACAAACA GACATCATTT TCAGGTCGAG ACTTCCCGAT 
ATCTATATCC CCAAACACCT TCCTCTCCAC ACCTATTGCT TCCAGAACAA GCAGTCTCCT 
GAGCACGCCT CTCGTCCTTG CCTCATCAAT GGCGTCACGG GCCAAGTCTA TTCCTACGCC 
CAAGTCGAGC TCACCGCTCG CAAAGTTGCC GCCGGATTAA ACCGTCTCGG AGTCCGACAA 
GGCCACGTGA TCATGGTTCT GCTCCCGAAC TCGCCGGAAT TCGTCCTCGC ATTCCTTGGC 
GCGTCGTTCC GCGGGGCGAT GACCACGGCG GCGAATCCTT TCTTCACTCC CGCCGAGATC 
TTGAAACAAG CCAAAGCTTC CAAGGCGAGG CTGATTATAA CGCAAGCTGC TTATTACGAC 
AAAGTGAAGG ATTATCTGGA AGTACAAAAC GATGCTAAAA TCGTCACCGT CGATTCGCCT 
CCCGAAGGCT GCTTGCATTT CTCGGAATTA AGTCAGTCCG ACGAAAACGA CTTGCCGGAT 
GTGGATATTC AACCCGACGA CGTCGTCGCG CTGCCGTACT CGTCCGGAAC GACAGGATTG 
CCGAAGGGAG TGATGCTGAC GCACAAGGGA CTAGTTACCA GCGTGGCCCA ACAAGTCGAC 
GGAGAGAACC CGAACCTGTA TTACGATAAA GACGATGTCG TTTTGTGCGT TTTGCCTCTC 
TTCCATATTT ATTCGTTGAA CTCTGTTTTG CTCTGCGCGC TACGAGCCGG AGCCGCCATT 
TTGATAATGC CTAAATTTGA GATCGGCTTG CTCTTGAAGC TGATCGAGAA ACATAGAGTG 
AGCGTGGCAC CGATTGTGCC GCCGATTGTT TTGGCTATTT CCAAGTATCC TGAGCTTGAT 
AAATACGACT TGTCGTCTTT GAGAGTTCTC AAGTCTGGTG GTGCTCCACT GGGTAAGGAG 
CTTGAAGACA GTGTCAGATG CAAGTTTCCA AATGTGACGC TGGGCCAGGG ATATGGAATG 
ACAGAAGCAG GGCCGGTGTT GACAATGTCA TTGGCATTTG CAAAGAAACC ATTTGAAGTG 
AAAGCAGGAG GGTGTGGAAC TGTTGTTAGA AATGCAGAAT TAAAGATCGT TGACCCTGAA 
TCTGGTTCTT CTTTACCAAG AAACCAGCCT GGAGAGATTT GCATTCGTGG TGACCAAATC 
ATGAAAGGTT ATCTTAACGA TCCAGAGGCT ACAAAGAGAA CCATAGACGA TGAAGGTTGG 
TTGCATACCG GAGATATTGG ATTGGTCGAT GATGATGATG AGCTCTTCAT TGTTGATAGG 
TTAAAAGAAC TCATCAAATA CAAAGGGTTT CAGGTTGCCC CTGCTGAACT TGAAGCTCTT 
GTACTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC107428172 ( XM_016038646.2 ) cDNA ORF clone, Ziziphus jujuba(common jujube) -> XP_015894132.2 Ziziphus jujuba 4-coumarate--CoA ligase 1 (LOC107428172), mRNA.

Price & Availability↑

CloneID	OZi33568
Clone ID Related Accession (Same CDS sequence)	XM_016038646.2
Accession Version	XM_016038646.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1563bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-15
Organism	Ziziphus jujuba(common jujube)
Product	LOW QUALITY PROTEIN: 4-coumarate--CoA ligase 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029688.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 16, 2018 this sequence version replaced XM_016038646.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Ziziphus jujuba Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END##

ATGGCGGTCA CCGAAAAGAA ACAACAAACA GACATCATTT TCAGGTCGAG ACTTCCCGAT 
ATCTATATCC CCAAACACCT TCCTCTCCAC ACCTATTGCT TCCAGAACAA GCAGTCTCCT 
GAGCACGCCT CTCGTCCTTG CCTCATCAAT GGCGTCACGG GCCAAGTCTA TTCCTACGCC 
CAAGTCGAGC TCACCGCTCG CAAAGTTGCC GCCGGATTAA ACCGTCTCGG AGTCCGACAA 
GGCCACGTGA TCATGGTTCT GCTCCCGAAC TCGCCGGAAT TCGTCCTCGC ATTCCTTGGC 
GCGTCGTTCC GCGGGGCGAT GACCACGGCG GCGAATCCTT TCTTCACTCC CGCCGAGATC 
TTGAAACAAG CCAAAGCTTC CAAGGCGAGG CTGATTATAA CGCAAGCTGC TTATTACGAC 
AAAGTGAAGG ATTATCTGGA AGTACAAAAC GATGCTAAAA TCGTCACCGT CGATTCGCCT 
CCCGAAGGCT GCTTGCATTT CTCGGAATTA AGTCAGTCCG ACGAAAACGA CTTGCCGGAT 
GTGGATATTC AACCCGACGA CGTCGTCGCG CTGCCGTACT CGTCCGGAAC GACAGGATTG 
CCGAAGGGAG TGATGCTGAC GCACAAGGGA CTAGTTACCA GCGTGGCCCA ACAAGTCGAC 
GGAGAGAACC CGAACCTGTA TTACGATAAA GACGATGTCG TTTTGTGCGT TTTGCCTCTC 
TTCCATATTT ATTCGTTGAA CTCTGTTTTG CTCTGCGCGC TACGAGCCGG AGCCGCCATT 
TTGATAATGC CTAAATTTGA GATCGGCTTG CTCTTGAAGC TGATCGAGAA ACATAGAGTG 
AGCGTGGCAC CGATTGTGCC GCCGATTGTT TTGGCTATTT CCAAGTATCC TGAGCTTGAT 
AAATACGACT TGTCGTCTTT GAGAGTTCTC AAGTCTGGTG GTGCTCCACT GGGTAAGGAG 
CTTGAAGACA GTGTCAGATG CAAGTTTCCA AATGTGACGC TGGGCCAGGG ATATGGAATG 
ACAGAAGCAG GGCCGGTGTT GACAATGTCA TTGGCATTTG CAAAGAAACC ATTTGAAGTG 
AAAGCAGGAG GGTGTGGAAC TGTTGTTAGA AATGCAGAAT TAAAGATCGT TGACCCTGAA 
TCTGGTTCTT CTTTACCAAG AAACCAGCCT GGAGAGATTT GCATTCGTGG TGACCAAATC 
ATGAAAGGTT ATCTTAACGA TCCAGAGGCT ACAAAGAGAA CCATAGACGA TGAAGGTTGG 
TTGCATACCG GAGATATTGG ATTGGTCGAT GATGATGATG AGCTCTTCAT TGTTGATAGG 
TTAAAAGAAC TCATCAAATA CAAAGGGTTT CAGGTTGCCC CTGCTAACTT GAAGCTCTTG 
TACTCTGAAC TTGAAGCTCT TCTACTAACC CATCCTTACA TCTCTGACGC TGCAGTTGTT 
CCCATGAAAG ATGAAGCAGC GGGGGAAATT CCTGTTGCAT TTGTGGTCAG ATCAAATGGC 
TCCAACATCA CCGAGGATGA AATCAAGCAA TTTGTTTCTA AACAGGTATA TATTTATAAA 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015894132.2
CDS	145..1707
Translation	MAVTEKKQQTDIIFRSRLPDIYIPKHLPLHTYCFQNKQSPEHASRPCLINGVTGQVYSYAQVELTARKVAAGLNRLGVRQGHVIMVLLPNSPEFVLAFLGASFRGAMTTAANPFFTPAEILKQAKASKARLIITQAAYYDKVKDYLEVQNDAKIVTVDSPPEGCLHFSELSQSDENDLPDVDIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYYDKDDVVLCVLPLFHIYSLNSVLLCALRAGAAILIMPKFEIGLLLKLIEKHRVSVAPIVPPIVLAISKYPELDKYDLSSLRVLKSGGAPLGKELEDSVRCKFPNVTLGQGYGMTEAGPVLTMSLAFAKKPFEVKAGGCGTVVRNAELKIVDPESGSSLPRNQPGEICIRGDQIMKGYLNDPEATKRTIDDEGWLHTGDIGLVDDDDELFIVDRLKELIKYKGFQVAPANLKLLYSELEALLLTHPYISDAAVVPMKDEAAGEIPVAFVVRSNGSNITEDEIKQFVSKQVYIYK

Target ORF information:

RefSeq Version	XM_016038646.2
Organism	Ziziphus jujuba(common jujube)
Definition	Ziziphus jujuba 4-coumarate--CoA ligase 1 (LOC107428172), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016038646.2

ORF Insert Sequence:

ATGGCGGTCA CCGAAAAGAA ACAACAAACA GACATCATTT TCAGGTCGAG ACTTCCCGAT 
ATCTATATCC CCAAACACCT TCCTCTCCAC ACCTATTGCT TCCAGAACAA GCAGTCTCCT 
GAGCACGCCT CTCGTCCTTG CCTCATCAAT GGCGTCACGG GCCAAGTCTA TTCCTACGCC 
CAAGTCGAGC TCACCGCTCG CAAAGTTGCC GCCGGATTAA ACCGTCTCGG AGTCCGACAA 
GGCCACGTGA TCATGGTTCT GCTCCCGAAC TCGCCGGAAT TCGTCCTCGC ATTCCTTGGC 
GCGTCGTTCC GCGGGGCGAT GACCACGGCG GCGAATCCTT TCTTCACTCC CGCCGAGATC 
TTGAAACAAG CCAAAGCTTC CAAGGCGAGG CTGATTATAA CGCAAGCTGC TTATTACGAC 
AAAGTGAAGG ATTATCTGGA AGTACAAAAC GATGCTAAAA TCGTCACCGT CGATTCGCCT 
CCCGAAGGCT GCTTGCATTT CTCGGAATTA AGTCAGTCCG ACGAAAACGA CTTGCCGGAT 
GTGGATATTC AACCCGACGA CGTCGTCGCG CTGCCGTACT CGTCCGGAAC GACAGGATTG 
CCGAAGGGAG TGATGCTGAC GCACAAGGGA CTAGTTACCA GCGTGGCCCA ACAAGTCGAC 
GGAGAGAACC CGAACCTGTA TTACGATAAA GACGATGTCG TTTTGTGCGT TTTGCCTCTC 
TTCCATATTT ATTCGTTGAA CTCTGTTTTG CTCTGCGCGC TACGAGCCGG AGCCGCCATT 
TTGATAATGC CTAAATTTGA GATCGGCTTG CTCTTGAAGC TGATCGAGAA ACATAGAGTG 
AGCGTGGCAC CGATTGTGCC GCCGATTGTT TTGGCTATTT CCAAGTATCC TGAGCTTGAT 
AAATACGACT TGTCGTCTTT GAGAGTTCTC AAGTCTGGTG GTGCTCCACT GGGTAAGGAG 
CTTGAAGACA GTGTCAGATG CAAGTTTCCA AATGTGACGC TGGGCCAGGG ATATGGAATG 
ACAGAAGCAG GGCCGGTGTT GACAATGTCA TTGGCATTTG CAAAGAAACC ATTTGAAGTG 
AAAGCAGGAG GGTGTGGAAC TGTTGTTAGA AATGCAGAAT TAAAGATCGT TGACCCTGAA 
TCTGGTTCTT CTTTACCAAG AAACCAGCCT GGAGAGATTT GCATTCGTGG TGACCAAATC 
ATGAAAGGTT ATCTTAACGA TCCAGAGGCT ACAAAGAGAA CCATAGACGA TGAAGGTTGG 
TTGCATACCG GAGATATTGG ATTGGTCGAT GATGATGATG AGCTCTTCAT TGTTGATAGG 
TTAAAAGAAC TCATCAAATA CAAAGGGTTT CAGGTTGCCC CTGCTAACTT GAAGCTCTTG 
TACTCTGAAC TTGAAGCTCT TCTACTAACC CATCCTTACA TCTCTGACGC TGCAGTTGTT 
CCCATGAAAG ATGAAGCAGC GGGGGAAATT CCTGTTGCAT TTGTGGTCAG ATCAAATGGC 
TCCAACATCA CCGAGGATGA AATCAAGCAA TTTGTTTCTA AACAGGTATA TATTTATAAA 
TAG