LOC100249727 cDNA ORF clone, Vitis vinifera(wine grape)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100249727
Entrez Gene ID	100249727
Full Name	probable beta-D-xylosidase 5
Gene Type	protein-coding
Organism	Vitis vinifera(wine grape)
Genome	Chromosome: 3 Map Location: 3\|3

mRNA and Protein(s)

mRNA	Protein	Name
XM_002264078.3	XP_002264114.2	probable beta-D-xylosidase 5

Pathways from BioSystems
Gene Ontology

The following LOC100249727 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100249727 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OVa26493	XM_002264078.3 Latest version!	Vitis vinifera probable beta-D-xylosidase 5 (LOC100249727), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100249727 ( XM_002264078.3 ) cDNA ORF clone, Vitis vinifera(wine grape) -> XP_002264114.2 Vitis vinifera probable beta-D-xylosidase 5 (LOC100249727), mRNA.

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CloneID	OVa26493
Clone ID Related Accession (Same CDS sequence)	XM_002264078.3
Accession Version	XM_002264078.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2385bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-11-24
Organism	Vitis vinifera(wine grape)
Product	probable beta-D-xylosidase 5
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012009.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Nov 25, 2016 this sequence version replaced XM_002264078.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Vitis vinifera Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGAAGA ACCAACTAAT TCTGTTGCCC ATTTTCCTGT CACTGCCGCT CCTAGCAATC 
TCACAACCTA CTCACCGATA CGCATGCGAT AGAACCGATC CCAACTCGAG CCAATTTCCA 
TTCTGTAACA CCTCCTTACC TTACCAGGAC CGAGCCAGCG ACCTAGTGTC GCGCCTCACC 
CTCCAAGAGA AGGCGAAGCA ACTAATAAAC AGTGCCACAG GTATTTCTAG GCTTGGTGTG 
CCCGATTACG AATGGTGGTC TGAAGCACTT CATGGGGTCT CAAACAGTGG GATTGGGGTG 
CATTTTCATG ATCCCATCCC TGCTGTGACT ATTTTTCCAG CAGTGATTCT CTCGGCTGCT 
AGTTTCAATG AGTCATTGTG GTACACGATG GGGCAGGTTG TGTCCACTGA AGGTAGAGCC 
ATGTACAATG TAGGTCAAGC TGGGCTGACA TATTGGAGTC CTAATGTTAA CATTTTTCGT 
GACCCCAGAT GGGGAAGGGG CCAGGAGACT CCAGGTGAGG ACCCCCTGGT TGTTTCACGG 
TATGCTGTAA ACTATGTCCG GGGTTTACAA GAAGTAGGTA AGGAGGGAAA CTTTGCTGCT 
GATCGCCTCA AGGTTTCAAG CTGCTGTAAA CACTACACTG CCTATGATGT TGATAAGTGG 
AAAGGGGTTG ATCGATTTCA TTTTGACGCA AAGGTGACAT TGCAGGACCT AGAAGATACA 
TATCAGCCAC CATTCAAGAG CTGTGTAGAG GAGGGGCACG TAAGCAGTGT AATGTGTTCA 
TACAATAGAG TAAATGGAGT TCCCACCTGC GCCAACCCAG AACTGCTCAA AGGGGTGATC 
AGAGACCAAT GGGGTCTAGA TGGATACATT GTTTCTGATT GTGACTCCAT AATGGTATAT 
CACGAGAGGA TGAATTACAC AGAAACACCA GAAGATGCGG TGGCTCTTGC CTTGAAAGCG 
GGTTTAAACT TGAATTGTGG ATCTTATCTT GGTGACTATA CTAAGAATGC AGTTAACTTG 
GGAAAGGTAA AAGAATCTAT TGTCAACCAG GCCTTGATAT ACAACTACAT AGTCCTTATG 
AGGCTTGGCT TCTTTGATGG GGACCCAACA ATGCTCCCAT TTGGGAAAAT GGGGCCATCC 
GACGTGTGCA CCGTTGATCA TCAACTGTTG GCTCTGGATG CTGCAAAGCA GGGAATAGTC 
TTGCTGCATA ACAATGGAGC CCTTCCATTG TCCCCAAATA CCACCAAGAC ATTAGCTGTT 
ATAGGACCTA ATGCTGATGC AACCAATACC ATGTTAAGCA ACTATGCTGG TGTACCATGT 
CGATACACTA GTCCTTTACA AGGACTGCAG AAATATGTGT CAGCTGTGAG TTATGAGAAA 
GGGTGTGCCA ATGTGAGCTG CAGTGAAGAA ACCCTGATTG AGGGGGCAGC CAGCATTGCA 
TCCATGGCTG ATGCCACTGT GGTGGTTGTG GGCCTTGATC TATTCATTGA GGCAGAAGAC 
CTTGACAGAG TGAACTTGAC CTTACCTGGG TTTCAAGAGA AGCTTGTGAT GGAAGCGGCT 
AAGGCAGCAA ACGGGACAGT GATTCTTGTT GTTATGTCAG CTGGCCCTGT TGACATTTCC 
TTTGTGAAGA ATGTGAGCAA GATTGGGGGG ATCCTATGGG TCGGGTACCC AGGTCAAGCA 
GGAGGTGATG CCATATCTCA AGTCATATTT GGAGACTACA ATCCAGGTGG AAGGTCCCCA 
TTTACATGGT ACCCTCAAGA GTATGTGGAT CAAGTTCCAA TGACTGATAT GAACATGAGA 
CCTAATGCCA CTTCAAACTT CCCAGGAAGA ACCTACCGCT TCTATACAGG GAAATCGTTA 
TACCAGTTCG GGCATGGCCT AAGCTACTCA ACATTTTACA AGTTCATAAA ATCAGCCCCC 
ACCACCGTTC TAGTCCATTT ACTGCCCCAG ATGGACATGC CTAACATTTT CTCTTCCAAT 
TACCCCACAA TGCCAAACCC CAATACTAAT GGCCAAGCCA TTGATATCTC AGCCATAGAC 
TGCAGGAACT TGAGCAATAT TGATATAGTG ATTGGAGTGA AGAATGCGGG CGAAATTGAT 
GGTACGCATG TTGTGCTAGC GTTTTGGAAG CCACCAAGGT CAGGAGTGAG GGGGGCACCA 
GGAGTGGAGC TGGTGGGGTT TGAGAGAGTG GAGGTGAAGA GAGGGAAGAC AGAGATGGTG 
GGAATGAGGT TGGATGTGTG TGGAAAAATA AGTAATGTGG ATGAAGAAGG GAAGAGGAAG 
TTGGTGATGG GGATGCATAC ACTTGTGGTT GGTTCTTCAA GTGAGCAACA AGCGAGGCAC 
CATGTCAACT TTAGGCTTGC TAAAAGTGAG CCCCATATGA TGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002264114.2
CDS	25..2409
Translation	MKKNQLILLPIFLSLPLLAISQPTHRYACDRTDPNSSQFPFCNTSLPYQDRASDLVSRLTLQEKAKQLINSATGISRLGVPDYEWWSEALHGVSNSGIGVHFHDPIPAVTIFPAVILSAASFNESLWYTMGQVVSTEGRAMYNVGQAGLTYWSPNVNIFRDPRWGRGQETPGEDPLVVSRYAVNYVRGLQEVGKEGNFAADRLKVSSCCKHYTAYDVDKWKGVDRFHFDAKVTLQDLEDTYQPPFKSCVEEGHVSSVMCSYNRVNGVPTCANPELLKGVIRDQWGLDGYIVSDCDSIMVYHERMNYTETPEDAVALALKAGLNLNCGSYLGDYTKNAVNLGKVKESIVNQALIYNYIVLMRLGFFDGDPTMLPFGKMGPSDVCTVDHQLLALDAAKQGIVLLHNNGALPLSPNTTKTLAVIGPNADATNTMLSNYAGVPCRYTSPLQGLQKYVSAVSYEKGCANVSCSEETLIEGAASIASMADATVVVVGLDLFIEAEDLDRVNLTLPGFQEKLVMEAAKAANGTVILVVMSAGPVDISFVKNVSKIGGILWVGYPGQAGGDAISQVIFGDYNPGGRSPFTWYPQEYVDQVPMTDMNMRPNATSNFPGRTYRFYTGKSLYQFGHGLSYSTFYKFIKSAPTTVLVHLLPQMDMPNIFSSNYPTMPNPNTNGQAIDISAIDCRNLSNIDIVIGVKNAGEIDGTHVVLAFWKPPRSGVRGAPGVELVGFERVEVKRGKTEMVGMRLDVCGKISNVDEEGKRKLVMGMHTLVVGSSSEQQARHHVNFRLAKSEPHMM

Target ORF information:

RefSeq Version	XM_002264078.3
Organism	Vitis vinifera(wine grape)
Definition	Vitis vinifera probable beta-D-xylosidase 5 (LOC100249727), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002264078.3

ORF Insert Sequence:

ATGAAGAAGA ACCAACTAAT TCTGTTGCCC ATTTTCCTGT CACTGCCGCT CCTAGCAATC 
TCACAACCTA CTCACCGATA CGCATGCGAT AGAACCGATC CCAACTCGAG CCAATTTCCA 
TTCTGTAACA CCTCCTTACC TTACCAGGAC CGAGCCAGCG ACCTAGTGTC GCGCCTCACC 
CTCCAAGAGA AGGCGAAGCA ACTAATAAAC AGTGCCACAG GTATTTCTAG GCTTGGTGTG 
CCCGATTACG AATGGTGGTC TGAAGCACTT CATGGGGTCT CAAACAGTGG GATTGGGGTG 
CATTTTCATG ATCCCATCCC TGCTGTGACT ATTTTTCCAG CAGTGATTCT CTCGGCTGCT 
AGTTTCAATG AGTCATTGTG GTACACGATG GGGCAGGTTG TGTCCACTGA AGGTAGAGCC 
ATGTACAATG TAGGTCAAGC TGGGCTGACA TATTGGAGTC CTAATGTTAA CATTTTTCGT 
GACCCCAGAT GGGGAAGGGG CCAGGAGACT CCAGGTGAGG ACCCCCTGGT TGTTTCACGG 
TATGCTGTAA ACTATGTCCG GGGTTTACAA GAAGTAGGTA AGGAGGGAAA CTTTGCTGCT 
GATCGCCTCA AGGTTTCAAG CTGCTGTAAA CACTACACTG CCTATGATGT TGATAAGTGG 
AAAGGGGTTG ATCGATTTCA TTTTGACGCA AAGGTGACAT TGCAGGACCT AGAAGATACA 
TATCAGCCAC CATTCAAGAG CTGTGTAGAG GAGGGGCACG TAAGCAGTGT AATGTGTTCA 
TACAATAGAG TAAATGGAGT TCCCACCTGC GCCAACCCAG AACTGCTCAA AGGGGTGATC 
AGAGACCAAT GGGGTCTAGA TGGATACATT GTTTCTGATT GTGACTCCAT AATGGTATAT 
CACGAGAGGA TGAATTACAC AGAAACACCA GAAGATGCGG TGGCTCTTGC CTTGAAAGCG 
GGTTTAAACT TGAATTGTGG ATCTTATCTT GGTGACTATA CTAAGAATGC AGTTAACTTG 
GGAAAGGTAA AAGAATCTAT TGTCAACCAG GCCTTGATAT ACAACTACAT AGTCCTTATG 
AGGCTTGGCT TCTTTGATGG GGACCCAACA ATGCTCCCAT TTGGGAAAAT GGGGCCATCC 
GACGTGTGCA CCGTTGATCA TCAACTGTTG GCTCTGGATG CTGCAAAGCA GGGAATAGTC 
TTGCTGCATA ACAATGGAGC CCTTCCATTG TCCCCAAATA CCACCAAGAC ATTAGCTGTT 
ATAGGACCTA ATGCTGATGC AACCAATACC ATGTTAAGCA ACTATGCTGG TGTACCATGT 
CGATACACTA GTCCTTTACA AGGACTGCAG AAATATGTGT CAGCTGTGAG TTATGAGAAA 
GGGTGTGCCA ATGTGAGCTG CAGTGAAGAA ACCCTGATTG AGGGGGCAGC CAGCATTGCA 
TCCATGGCTG ATGCCACTGT GGTGGTTGTG GGCCTTGATC TATTCATTGA GGCAGAAGAC 
CTTGACAGAG TGAACTTGAC CTTACCTGGG TTTCAAGAGA AGCTTGTGAT GGAAGCGGCT 
AAGGCAGCAA ACGGGACAGT GATTCTTGTT GTTATGTCAG CTGGCCCTGT TGACATTTCC 
TTTGTGAAGA ATGTGAGCAA GATTGGGGGG ATCCTATGGG TCGGGTACCC AGGTCAAGCA 
GGAGGTGATG CCATATCTCA AGTCATATTT GGAGACTACA ATCCAGGTGG AAGGTCCCCA 
TTTACATGGT ACCCTCAAGA GTATGTGGAT CAAGTTCCAA TGACTGATAT GAACATGAGA 
CCTAATGCCA CTTCAAACTT CCCAGGAAGA ACCTACCGCT TCTATACAGG GAAATCGTTA 
TACCAGTTCG GGCATGGCCT AAGCTACTCA ACATTTTACA AGTTCATAAA ATCAGCCCCC 
ACCACCGTTC TAGTCCATTT ACTGCCCCAG ATGGACATGC CTAACATTTT CTCTTCCAAT 
TACCCCACAA TGCCAAACCC CAATACTAAT GGCCAAGCCA TTGATATCTC AGCCATAGAC 
TGCAGGAACT TGAGCAATAT TGATATAGTG ATTGGAGTGA AGAATGCGGG CGAAATTGAT 
GGTACGCATG TTGTGCTAGC GTTTTGGAAG CCACCAAGGT CAGGAGTGAG GGGGGCACCA 
GGAGTGGAGC TGGTGGGGTT TGAGAGAGTG GAGGTGAAGA GAGGGAAGAC AGAGATGGTG 
GGAATGAGGT TGGATGTGTG TGGAAAAATA AGTAATGTGG ATGAAGAAGG GAAGAGGAAG 
TTGGTGATGG GGATGCATAC ACTTGTGGTT GGTTCTTCAA GTGAGCAACA AGCGAGGCAC 
CATGTCAACT TTAGGCTTGC TAAAAGTGAG CCCCATATGA TGTAA