LOC108746054 cDNA ORF clone, Trachymyrmex septentrionalis

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108746054
Entrez Gene ID	108746054
Full Name	phytanoyl-CoA dioxygenase-like
Gene Type	protein-coding
Organism	Trachymyrmex septentrionalis

mRNA and Protein(s)

mRNA	Protein	Name
XM_018482567.1	XP_018338069.1	phytanoyl-CoA dioxygenase-like isoform X1
XM_018482568.1	XP_018338070.1	phytanoyl-CoA dioxygenase-like isoform X2

Pathways from BioSystems
Gene Ontology

The following LOC108746054 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108746054 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OTr66575	XM_018482567.1 Latest version!	Trachymyrmex septentrionalis phytanoyl-CoA dioxygenase-like (LOC108746054), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
OTr66577	XM_018482568.1 Latest version!	Trachymyrmex septentrionalis phytanoyl-CoA dioxygenase-like (LOC108746054), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108746054 ( XM_018482567.1 ) cDNA ORF clone, Trachymyrmex septentrionalis -> XP_018338069.1 Trachymyrmex septentrionalis phytanoyl-CoA dioxygenase-like (LOC108746054), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OTr66575
Clone ID Related Accession (Same CDS sequence)	XM_018482567.1
Accession Version	XM_018482567.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 849bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-22
Organism	Trachymyrmex septentrionalis
Product	phytanoyl-CoA dioxygenase-like isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017304758.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Trachymyrmex septentrionalis Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGGACA TTCGCGCGCA GTTTCAGAAA GATGGTTATG TCATTTTCGA AGACTTCTTT 
CAACCGGAAG AGATCGAAGA ATTGAGAGCT TGTGGAGAAG AATTTACAAA TAAGTTGCCA 
CCTGAGTCAG AACGAAAAGT ATTTAATACA GTACAATTAC AACAGAATAA GGATAAGTAT 
TTTTTGGATA GCGCTAATAA AATAAGTGTT TTTTTCGAGT CTGAAGCTCT GGAAGAAGAC 
GGAAAATTGA AGGTTCATCC AAGAGTGTCG TTAAACAAAG TAGGTCATGC TCTTCATTGG 
TTACACCCTA CTTTCAAAAA ATACACGTTC GATGAAAGAG TCAAAGAAAT TGCTTTTCAA 
TTAAACTATG AGGAGCCGAT GGTGTGTCAA TCAATGTACA TTTACAAAAA TCCTGGAATA 
GGCTCGGAAG TTACGATGCA TCAGGACGCA TCATATTTAT ATGTTGAGCC AATGAAACTC 
GTGGGTTTTT GGATTGCATT GGAAGATGCA ACACTAGAGA ACGGATGTCT ATGGATCGCC 
CCAGGTTCAC ATCAGAGTGG AACACATAGG CGTTATATGA GAAATAAAGA TTCAAATTCT 
CAAGAATTAC TAATTTTCGA CAGGCCAGCA CCTTGTTATC CATTAAGTAA TTTCAGACCA 
GTTCCAGTAC GCAAAGGAAC TTGTATTCTT ATCCATGGTC AAGTGGTTCA TTTTTCTTAT 
CCAAACAAGA GTGAAACATC GAGACACGCT TACACTTTTC ATGTGATTGA GACGAAACAT 
GTATCGTATT CGAAGGAAAA TTGGCTTCAA CCTCCTGCTG AAGGTTTCGC GAGTCTTTAT 
AAAAATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018338069.1
CDS	183..1031
Translation	MKDIRAQFQKDGYVIFEDFFQPEEIEELRACGEEFTNKLPPESERKVFNTVQLQQNKDKYFLDSANKISVFFESEALEEDGKLKVHPRVSLNKVGHALHWLHPTFKKYTFDERVKEIAFQLNYEEPMVCQSMYIYKNPGIGSEVTMHQDASYLYVEPMKLVGFWIALEDATLENGCLWIAPGSHQSGTHRRYMRNKDSNSQELLIFDRPAPCYPLSNFRPVPVRKGTCILIHGQVVHFSYPNKSETSRHAYTFHVIETKHVSYSKENWLQPPAEGFASLYKN

Target ORF information:

RefSeq Version	XM_018482567.1
Organism	Trachymyrmex septentrionalis
Definition	Trachymyrmex septentrionalis phytanoyl-CoA dioxygenase-like (LOC108746054), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018482567.1

ORF Insert Sequence:

ATGAAGGACA TTCGCGCGCA GTTTCAGAAA GATGGTTATG TCATTTTCGA AGACTTCTTT 
CAACCGGAAG AGATCGAAGA ATTGAGAGCT TGTGGAGAAG AATTTACAAA TAAGTTGCCA 
CCTGAGTCAG AACGAAAAGT ATTTAATACA GTACAATTAC AACAGAATAA GGATAAGTAT 
TTTTTGGATA GCGCTAATAA AATAAGTGTT TTTTTCGAGT CTGAAGCTCT GGAAGAAGAC 
GGAAAATTGA AGGTTCATCC AAGAGTGTCG TTAAACAAAG TAGGTCATGC TCTTCATTGG 
TTACACCCTA CTTTCAAAAA ATACACGTTC GATGAAAGAG TCAAAGAAAT TGCTTTTCAA 
TTAAACTATG AGGAGCCGAT GGTGTGTCAA TCAATGTACA TTTACAAAAA TCCTGGAATA 
GGCTCGGAAG TTACGATGCA TCAGGACGCA TCATATTTAT ATGTTGAGCC AATGAAACTC 
GTGGGTTTTT GGATTGCATT GGAAGATGCA ACACTAGAGA ACGGATGTCT ATGGATCGCC 
CCAGGTTCAC ATCAGAGTGG AACACATAGG CGTTATATGA GAAATAAAGA TTCAAATTCT 
CAAGAATTAC TAATTTTCGA CAGGCCAGCA CCTTGTTATC CATTAAGTAA TTTCAGACCA 
GTTCCAGTAC GCAAAGGAAC TTGTATTCTT ATCCATGGTC AAGTGGTTCA TTTTTCTTAT 
CCAAACAAGA GTGAAACATC GAGACACGCT TACACTTTTC ATGTGATTGA GACGAAACAT 
GTATCGTATT CGAAGGAAAA TTGGCTTCAA CCTCCTGCTG AAGGTTTCGC GAGTCTTTAT 
AAAAATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC108746054 ( XM_018482568.1 ) cDNA ORF clone, Trachymyrmex septentrionalis -> XP_018338070.1 Trachymyrmex septentrionalis phytanoyl-CoA dioxygenase-like (LOC108746054), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OTr66577
Clone ID Related Accession (Same CDS sequence)	XM_018482568.1
Accession Version	XM_018482568.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-22
Organism	Trachymyrmex septentrionalis
Product	phytanoyl-CoA dioxygenase-like isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017304758.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Trachymyrmex septentrionalis Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTTTCAGA AAGATGGTTA TGTCATTTTC GAAGACTTCT TTCAACCGGA AGAGATCGAA 
GAATTGAGAG CTTGTGGAGA AGAATTTACA AATAAGTTGC CACCTGAGTC AGAACGAAAA 
GTATTTAATA CAGTACAATT ACAACAGAAT AAGGATAAGT ATTTTTTGGA TAGCGCTAAT 
AAAATAAGTG TTTTTTTCGA GTCTGAAGCT CTGGAAGAAG ACGGAAAATT GAAGGTTCAT 
CCAAGAGTGT CGTTAAACAA AGTAGGTCAT GCTCTTCATT GGTTACACCC TACTTTCAAA 
AAATACACGT TCGATGAAAG AGTCAAAGAA ATTGCTTTTC AATTAAACTA TGAGGAGCCG 
ATGGTGTGTC AATCAATGTA CATTTACAAA AATCCTGGAA TAGGCTCGGA AGTTACGATG 
CATCAGGACG CATCATATTT ATATGTTGAG CCAATGAAAC TCGTGGGTTT TTGGATTGCA 
TTGGAAGATG CAACACTAGA GAACGGATGT CTATGGATCG CCCCAGGTTC ACATCAGAGT 
GGAACACATA GGCGTTATAT GAGAAATAAA GATTCAAATT CTCAAGAATT ACTAATTTTC 
GACAGGCCAG CACCTTGTTA TCCATTAAGT AATTTCAGAC CAGTTCCAGT ACGCAAAGGA 
ACTTGTATTC TTATCCATGG TCAAGTGGTT CATTTTTCTT ATCCAAACAA GAGTGAAACA 
TCGAGACACG CTTACACTTT TCATGTGATT GAGACGAAAC ATGTATCGTA TTCGAAGGAA 
AATTGGCTTC AACCTCCTGC TGAAGGTTTC GCGAGTCTTT ATAAAAATTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018338070.1
CDS	60..890
Translation	MFQKDGYVIFEDFFQPEEIEELRACGEEFTNKLPPESERKVFNTVQLQQNKDKYFLDSANKISVFFESEALEEDGKLKVHPRVSLNKVGHALHWLHPTFKKYTFDERVKEIAFQLNYEEPMVCQSMYIYKNPGIGSEVTMHQDASYLYVEPMKLVGFWIALEDATLENGCLWIAPGSHQSGTHRRYMRNKDSNSQELLIFDRPAPCYPLSNFRPVPVRKGTCILIHGQVVHFSYPNKSETSRHAYTFHVIETKHVSYSKENWLQPPAEGFASLYKN

Target ORF information:

RefSeq Version	XM_018482568.1
Organism	Trachymyrmex septentrionalis
Definition	Trachymyrmex septentrionalis phytanoyl-CoA dioxygenase-like (LOC108746054), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018482568.1

ORF Insert Sequence:

ATGTTTCAGA AAGATGGTTA TGTCATTTTC GAAGACTTCT TTCAACCGGA AGAGATCGAA 
GAATTGAGAG CTTGTGGAGA AGAATTTACA AATAAGTTGC CACCTGAGTC AGAACGAAAA 
GTATTTAATA CAGTACAATT ACAACAGAAT AAGGATAAGT ATTTTTTGGA TAGCGCTAAT 
AAAATAAGTG TTTTTTTCGA GTCTGAAGCT CTGGAAGAAG ACGGAAAATT GAAGGTTCAT 
CCAAGAGTGT CGTTAAACAA AGTAGGTCAT GCTCTTCATT GGTTACACCC TACTTTCAAA 
AAATACACGT TCGATGAAAG AGTCAAAGAA ATTGCTTTTC AATTAAACTA TGAGGAGCCG 
ATGGTGTGTC AATCAATGTA CATTTACAAA AATCCTGGAA TAGGCTCGGA AGTTACGATG 
CATCAGGACG CATCATATTT ATATGTTGAG CCAATGAAAC TCGTGGGTTT TTGGATTGCA 
TTGGAAGATG CAACACTAGA GAACGGATGT CTATGGATCG CCCCAGGTTC ACATCAGAGT 
GGAACACATA GGCGTTATAT GAGAAATAAA GATTCAAATT CTCAAGAATT ACTAATTTTC 
GACAGGCCAG CACCTTGTTA TCCATTAAGT AATTTCAGAC CAGTTCCAGT ACGCAAAGGA 
ACTTGTATTC TTATCCATGG TCAAGTGGTT CATTTTTCTT ATCCAAACAA GAGTGAAACA 
TCGAGACACG CTTACACTTT TCATGTGATT GAGACGAAAC ATGTATCGTA TTCGAAGGAA 
AATTGGCTTC AACCTCCTGC TGAAGGTTTC GCGAGTCTTT ATAAAAATTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.