| Gene Symbol | BPIFA1 |
| Entrez Gene ID | 449524 |
| Full Name | BPI fold containing family A member 1 |
| Synonyms | PLUNC,SPLUNC1 |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
ORF » Species Summary » Sus scrofa » BPIFA1 cDNA ORF clone
| Gene Symbol | BPIFA1 |
| Entrez Gene ID | 449524 |
| Full Name | BPI fold containing family A member 1 |
| Synonyms | PLUNC,SPLUNC1 |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
| mRNA | Protein | Name |
|---|---|---|
| XM_005672835.2 | XP_005672892.1 | BPI fold-containing family A member 1 isoform X1 |
| XM_005672835.1 | XP_005672892.1 | BPI fold-containing family A member 1 isoform X1 |
| NM_001005727.1 | NP_001005727.1 | BPI fold-containing family A member 1 precursor |
| XM_005672834.1 | XP_005672891.1 | BPI fold-containing family A member 1 isoform X1 |
Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily.
Bingle CD, Seal RL, Craven CJ
Biochemical Society transactions39(4)977-83(2011 Aug)
Distant cousins: genomic and sequence diversity within the BPI fold-containing (BPIF)/PLUNC protein family.
Bingle CD, Bingle L, Craven CJ
Biochemical Society transactions39(4)961-5(2011 Aug)
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
Porcine SPLUNC1: molecular cloning, characterization and expression analysis.
Larsen K, Madsen LB, Bendixen C
Biochimica et biophysica acta1727(3)220-6(2005 Mar)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
High expression level in trachea and lung tissue only
Title: Porcine SPLUNC1: molecular cloning, characterization and expression analysis.
The following BPIFA1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BPIFA1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSe00541 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001005727.1 | |
| Accession Version | NM_001005727.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 750bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-12-25 | |
| Organism | Sus scrofa(pig) | |
| Product | BPI fold-containing family A member 1 precursor | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY733063.1. ##Evidence-Data-START## Transcript exon combination :: AY733063.1, FS715928.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02389758, SAMN02389765 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGTTTCAAG TTGCAGGCCT CATTGTCTTC TGTGGGCTGC TGGCCCAGAC CACAGCGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001005727.1 |
| CDS | 4..753 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001005727.1 |
1 | ATGTTTCAAG TTGCAGGCCT CATTGTCTTC TGTGGGCTGC TGGCCCAGAC CACAGCGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe24864 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005672835.2 , XM_005672835.1 , XM_005672834.1 | |
| Accession Version | XM_005672835.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 750bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | BPI fold-containing family A member 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010459.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005672835.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCTCAAG TTGCAGGCCT CATTGTCTTC TGTGGGCTGC TGGCCCAGAC CACAGCGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005672892.1 |
| CDS | 79..828 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005672835.2 |
1 | ATGTCTCAAG TTGCAGGCCT CATTGTCTTC TGTGGGCTGC TGGCCCAGAC CACAGCGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe24864 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005672835.2 , XM_005672835.1 , XM_005672834.1 | |
| Accession Version | XM_005672835.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 750bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-09-10 | |
| Organism | Sus scrofa(Pig) | |
| Product | BPI fold-containing family A member 1 isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003612563.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCTCAAG TTGCAGGCCT CATTGTCTTC TGTGGGCTGC TGGCCCAGAC CACAGCGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005672892.1 |
| CDS | 78..827 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005672835.1 |
1 | ATGTCTCAAG TTGCAGGCCT CATTGTCTTC TGTGGGCTGC TGGCCCAGAC CACAGCGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe24864 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005672835.2 , XM_005672835.1 , XM_005672834.1 | |
| Accession Version | XM_005672834.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 750bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | BPI fold-containing family A member 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010459.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCTCAAG TTGCAGGCCT CATTGTCTTC TGTGGGCTGC TGGCCCAGAC CACAGCGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005672891.1 |
| CDS | 183..932 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005672834.1 |
1 | ATGTCTCAAG TTGCAGGCCT CATTGTCTTC TGTGGGCTGC TGGCCCAGAC CACAGCGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. |
Distant cousins: genomic and sequence diversity within the BPI fold-containing (BPIF)/PLUNC protein family. |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
Porcine SPLUNC1: molecular cloning, characterization and expression analysis. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |