| Gene Symbol | LOC8085873 |
| Entrez Gene ID | 8085873 |
| Full Name | HBS1-like protein |
| Gene Type | protein-coding |
| Organism | Sorghum bicolor(sorghum) |
ORF » Species Summary » Sorghum bicolor » LOC8085873 cDNA ORF clone
| Gene Symbol | LOC8085873 |
| Entrez Gene ID | 8085873 |
| Full Name | HBS1-like protein |
| Gene Type | protein-coding |
| Organism | Sorghum bicolor(sorghum) |
| mRNA | Protein | Name |
|---|---|---|
| XM_002448733.1 | XP_002448778.1 | hypothetical protein |
| XM_021463689.1 | XP_021319364.1 | HBS1-like protein isoform X1 |
| XM_021463690.1 | XP_021319365.1 | HBS1-like protein isoform X1 |
| XM_021463692.1 | XP_021319367.1 | HBS1-like protein isoform X2 |
| XM_021463693.1 | XP_021319368.1 | HBS1-like protein isoform X3 |
| XM_002448733.2 | XP_002448778.1 | HBS1-like protein isoform X1 |
| XM_021463691.1 | XP_021319366.1 | HBS1-like protein isoform X2 |
The Sorghum bicolor genome and the diversification of grasses.
Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Narechania A, Otillar RP, Penning BW, Salamov AA, Wang Y, Zhang L, Carpita NC, Freeling M, Gingle AR, Hash CT, Keller B, Klein P, Kresovich S, McCann MC, Ming R, Peterson DG, Mehboob-ur-Rahman, Ware D, Westhoff P, Mayer KF, Messing J, Rokhsar DS
Nature457(7229)551-6(2009 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC8085873 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC8085873 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSc21853 | |
| Clone ID Related Accession (Same CDS sequence) | XM_002448733.1 , XM_021463689.1 , XM_021463690.1 , XM_002448733.2 | |
| Accession Version | XM_002448733.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2109bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2009-07-12 | |
| Organism | Sorghum bicolor(Sorghum) | |
| Product | hypothetical protein | |
| Comment | PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012875). COMPLETENESS: incomplete on both ends. | |
1 | ATGTGTGTCA ATCACATAGA TAGTAAAGCT GGCCAACTGG GTGTAAGAGA TGATAACAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_002448778.1 |
| CDS | 1..2109 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_002448733.1 |
1 | ATGTGTGTCA ATCACATAGA TAGTAAAGCT GGCCAACTGG GTGTAAGAGA TGATAACAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSc21853 | |
| Clone ID Related Accession (Same CDS sequence) | XM_002448733.1 , XM_021463689.1 , XM_021463690.1 , XM_002448733.2 | |
| Accession Version | XM_021463689.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2109bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-06-12 | |
| Organism | Sorghum bicolor(sorghum) | |
| Product | HBS1-like protein isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012875.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTGTGTCA ATCACATAGA TAGTAAAGCT GGCCAACTGG GTGTAAGAGA TGATAACAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_021319364.1 |
| CDS | 274..2382 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021463689.1 |
1 | ATGTGTGTCA ATCACATAGA TAGTAAAGCT GGCCAACTGG GTGTAAGAGA TGATAACAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSc21853 | |
| Clone ID Related Accession (Same CDS sequence) | XM_002448733.1 , XM_021463689.1 , XM_021463690.1 , XM_002448733.2 | |
| Accession Version | XM_021463690.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2109bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-06-12 | |
| Organism | Sorghum bicolor(sorghum) | |
| Product | HBS1-like protein isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012875.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTGTGTCA ATCACATAGA TAGTAAAGCT GGCCAACTGG GTGTAAGAGA TGATAACAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_021319365.1 |
| CDS | 360..2468 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021463690.1 |
1 | ATGTGTGTCA ATCACATAGA TAGTAAAGCT GGCCAACTGG GTGTAAGAGA TGATAACAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSc21853 | |
| Clone ID Related Accession (Same CDS sequence) | XM_002448733.1 , XM_021463689.1 , XM_021463690.1 , XM_002448733.2 | |
| Accession Version | XM_002448733.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2109bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-06-12 | |
| Organism | Sorghum bicolor(sorghum) | |
| Product | HBS1-like protein isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012875.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 13, 2017 this sequence version replaced XM_002448733.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTGTGTCA ATCACATAGA TAGTAAAGCT GGCCAACTGG GTGTAAGAGA TGATAACAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_002448778.1 |
| CDS | 421..2529 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_002448733.2 |
1 | ATGTGTGTCA ATCACATAGA TAGTAAAGCT GGCCAACTGG GTGTAAGAGA TGATAACAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSc121685 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021463692.1 , XM_021463691.1 | |
| Accession Version | XM_021463692.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2076bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-06-12 | |
| Organism | Sorghum bicolor(sorghum) | |
| Product | HBS1-like protein isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012875.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTTTGTTC CTGTGCTAGA TAACAGGTCT GATTTTGAGG AGCCCTTTAA AATTTCTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_021319367.1 |
| CDS | 323..2398 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021463692.1 |
1 | ATGTTTGTTC CTGTGCTAGA TAACAGGTCT GATTTTGAGG AGCCCTTTAA AATTTCTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSc121685 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021463692.1 , XM_021463691.1 | |
| Accession Version | XM_021463691.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2076bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-06-12 | |
| Organism | Sorghum bicolor(sorghum) | |
| Product | HBS1-like protein isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012875.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTTTGTTC CTGTGCTAGA TAACAGGTCT GATTTTGAGG AGCCCTTTAA AATTTCTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_021319366.1 |
| CDS | 470..2545 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021463691.1 |
1 | ATGTTTGTTC CTGTGCTAGA TAACAGGTCT GATTTTGAGG AGCCCTTTAA AATTTCTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSc121686 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021463693.1 | |
| Accession Version | XM_021463693.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1665bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-06-12 | |
| Organism | Sorghum bicolor(sorghum) | |
| Product | HBS1-like protein isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012875.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGTCGTTA CAGGCTTAAA ATCATCCAGA AACTTTAGAA AAGTTGACAC AAAGGTTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_021319368.1 |
| CDS | 871..2535 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021463693.1 |
1 | ATGGTCGTTA CAGGCTTAAA ATCATCCAGA AACTTTAGAA AAGTTGACAC AAAGGTTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The Sorghum bicolor genome and the diversification of grasses. |