Trim41 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Trim41
Entrez Gene ID	303088
Full Name	tripartite motif-containing 41
General protein information	Preferred Names tripartite motif-containing 41 Names E3 ubiquitin-protein ligase TRIM41 tripartite motif protein 41
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 10 Map Location: 10q21

mRNA and Protein(s)

mRNA	Protein	Name
NM_001134737.1	NP_001128209.1	E3 ubiquitin-protein ligase TRIM41

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	TRIM41	XP_005626338.1
Gallus gallus (chicken)	TRIM41	NP_001025843.1
Mus musculus (house mouse)	Trim41	NP_663352.2
Pan troglodytes (chimpanzee)	TRIM41	XP_001157098.2
Bos taurus (cattle)	TRIM41	NP_001193094.1
Homo sapiens (human)	TRIM41	NP_291027.3
Rattus norvegicus (Norway rat)	Trim41	NP_001128209.1

Gene Ontology
Bibliography

Related articles in PubMed

Characterization and Genetic Analyses of New Genes Coding for NOD2 Interacting Proteins.
Thi?baut R, Esmiol S, Lecine P, Mahfouz B, Hermant A, Nicoletti C, Parnis S, Perroy J, Borg JP, Pascoe L, Hugot JP, Ollendorff V
PloS one11(11)e0165420(2016)

Systematic analysis of dimeric E3-RING interactions reveals increased combinatorial complexity in human ubiquitination networks.
Woodsmith J, Jenn RC, Sanderson CM
Molecular & cellular proteomics : MCP11(7)M111.016162(2012 Jul)

Amplitude control of protein kinase C by RINCK, a novel E3 ubiquitin ligase.
Chen D, Gould C, Garza R, Gao T, Hampton RY, Newton AC
The Journal of biological chemistry282(46)33776-87(2007 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

RINCK is an E3 ligase that specifically recognizes the C1 domain of PKC isoforms
Title: Amplitude control of protein kinase C by RINCK, a novel E3 ubiquitin ligase.

The following Trim41 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Trim41 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa03530	NM_001134737.1 Latest version!	Rattus norvegicus tripartite motif-containing 41 (Trim41), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$370.30 $529.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Trim41 ( NM_001134737.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001128209.1 Rattus norvegicus tripartite motif-containing 41 (Trim41), mRNA.

Price & Availability↑

CloneID	ORa03530
Clone ID Related Accession (Same CDS sequence)	NM_001134737.1
Accession Version	NM_001134737.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1887bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-18
Organism	Rattus norvegicus(Norway rat)
Product	E3 ubiquitin-protein ligase TRIM41
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CB784926.1, CB714434.1, CB615599.1, BC168206.1, DY315972.1, BP492647.1 and AW434688.1. On or before Sep 5, 2008 this sequence version replaced XM_220357.4, XM_001069403.1. ##Evidence-Data-START## Transcript exon combination :: BC168206.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01906348 [ECO:0000348] ##Evidence-Data-END##

ATGGCTGCCG TTGCCATGAC ACCCAACCCT GTGCAGACCC TTCAGGAGGA GGCGGTGTGC 
GCCATCTGCC TCGATTACTT CACGGACCCC GTGTCCATCG GCTGCGGGCA CAACTTCTGC 
CGAGTGTGTG TAACCCAGTT GTGGGGCGGG GAGGATGAAG AAGACAGAGA TGAGTTGGAT 
CGGGAGGAGG AGGAGGAGGT CGGAGAGGAG GAAGAAGTGG AGGCTGTCGG GGCAGGCGGG 
GGTTGGGACA CCCCTATGCG CGATGAAGAT TATGAGGGTG ACATGGAGGA GGAGGCCGAG 
GAGGAAGAGG AAGGTGTGTT CTGGAGTAGT GGTATAGGCG GGTCTAACTG GGACAACATG 
GACTATGTGT GGGAGGAGGA GGAGGAGGAG GAAGAACTGG ACTATTACTT GGGGGATGTG 
GAGGACCTGA GGGTGGAAGA TGAGGATGAG GAGGAGGAAG TCCTGGAGGA AGACGAGGAA 
GAGGAGCTGG ACCCGATCAC CCAACTGCCA CCACCTCCAG CCCCTCGGAG GTGCTTCACT 
TGTCCCCAGT GTCGAAAAAG TTTTCCTCGG CGGAGCTTCC GCCCCAACCT GCAGTTGGCC 
AACATGGTCC AGGTGATTCG GCAGATGCAT CCAACCCCTG GTCGAGGGAG TCGTGTGAAT 
GAACAAGGCA TCTGTCCCAG ACACCAAGAA GCCCTGAAGC TGTTCTGTGA GGTGGATGAA 
GAAGCCATCT GTGTGGTGTG CCGCGAATCC AGGAGCCACA AACAGCATAG TGTGGTGCCA 
TTGGAGGAGG TAGTGCAGGA GTACAAGGCC AAGCTACAAG GGCATGTGGA ACCACTTAGG 
AAGCATCTAG AGGCTGTGCA GAAGATGAAG GCCAAGGAGG AGAGGCGGGT GACAGAGCTG 
AAGAGCCAGA TGAAGTCAGA GCTGGCAGCT GTGGCCTCAG AGTTTGGACG GTTAACACGG 
TTTCTGGCTG AAGAGCAGGC AGGACTAGAA CGGCGCCTCC GGGAGATGCA TGAAGCTCAG 
TTAGGACGTG CAGGAGCAGC AGCCAACCGC CTTGAAGAGC AGGCTGTCCA GCTAAGCCGC 
CTGCTTGCTG AAGCCCAAGA GCGGAGCCAA CAGGGGGGCC TGCGGCTATT GCAAGACATC 
AAGGAGACTT TCAATAGGTG TGAAGAGATA CAGTTGCAGC CCCCAGAGAT TTGGTCCCCT 
GACCCATGCC AACCCCATAG CCACGACTTT CTGACAGACG CCATCGTGAG GAAAATGAGC 
CGGATGTTCT GTCAGGCTGC AAGAGTGGAC CTGACACTGG ACCCAGACAC AGCTCACCCG 
GCTCTGCTGC TGTCCCCTGA TCGCCGTGGA GTCCGCTTGG CAGAACGTCG GCAGGAGGTT 
CCTGAACATT CCAAGCGCTT TTCAGCAGAC TGCTGTGTAC TAGGGGCCCA GGGCTTCCGC 
TCGGGCCGGC ACTACTGGGA GGTAGAGGTG GGTGGGCGGC GGGGCTGGGC AGTGGGTGCT 
GCCCGTGAAT CAACCCATCA TAAAGAAAAA GTGGGCTCTG GGGGGTCCTC TGTTAGCAGT 
GGGGATGCCA GCTCCTCACG CCATCACCAT CGCCGCCGCC GGCTCCATCT GCCTCAGCAG 
CTCCTGCTTC AGCGGGAAGT GTGGTGCGTG GGCACCCACG GCAAACGATA CCAGGCGCAG 
AGCTCAACAG AGCAGACACT GCTGAGCCCA TGTGAGAAAC CACGGCGTTT CGGCGTGTAC 
CTGGACTATG AGGCTGGGCG CCTGGGCTTC TACAACGCAG ATACCTTAGC TCATGTACAC 
ACCTTCTCAG CTGCCTTTCT TGGCGAGCGT GTTTTTCCTT TCTTCCGGGT ACTTTCCAAG 
GGTACCCGCA TCAAGCTCTG CCCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001128209.1
CDS	712..2598
Translation	MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELDREEEEEVGEEEEVEAVGAGGGWDTPMRDEDYEGDMEEEAEEEEEGVFWSSGIGGSNWDNMDYVWEEEEEEEELDYYLGDVEDLRVEDEDEEEEVLEEDEEEELDPITQLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAANRLEEQAVQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFSADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRHHHRRRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRLGFYNADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP

Target ORF information:

RefSeq Version	NM_001134737.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus tripartite motif-containing 41 (Trim41), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001134737.1

ORF Insert Sequence:

ATGGCTGCCG TTGCCATGAC ACCCAACCCT GTGCAGACCC TTCAGGAGGA GGCGGTGTGC 
GCCATCTGCC TCGATTACTT CACGGACCCC GTGTCCATCG GCTGCGGGCA CAACTTCTGC 
CGAGTGTGTG TAACCCAGTT GTGGGGCGGG GAGGATGAAG AAGACAGAGA TGAGTTGGAT 
CGGGAGGAGG AGGAGGAGGT CGGAGAGGAG GAAGAAGTGG AGGCTGTCGG GGCAGGCGGG 
GGTTGGGACA CCCCTATGCG CGATGAAGAT TATGAGGGTG ACATGGAGGA GGAGGCCGAG 
GAGGAAGAGG AAGGTGTGTT CTGGAGTAGT GGTATAGGCG GGTCTAACTG GGACAACATG 
GACTATGTGT GGGAGGAGGA GGAGGAGGAG GAAGAACTGG ACTATTACTT GGGGGATGTG 
GAGGACCTGA GGGTGGAAGA TGAGGATGAG GAGGAGGAAG TCCTGGAGGA AGACGAGGAA 
GAGGAGCTGG ACCCGATCAC CCAACTGCCA CCACCTCCAG CCCCTCGGAG GTGCTTCACT 
TGTCCCCAGT GTCGAAAAAG TTTTCCTCGG CGGAGCTTCC GCCCCAACCT GCAGTTGGCC 
AACATGGTCC AGGTGATTCG GCAGATGCAT CCAACCCCTG GTCGAGGGAG TCGTGTGAAT 
GAACAAGGCA TCTGTCCCAG ACACCAAGAA GCCCTGAAGC TGTTCTGTGA GGTGGATGAA 
GAAGCCATCT GTGTGGTGTG CCGCGAATCC AGGAGCCACA AACAGCATAG TGTGGTGCCA 
TTGGAGGAGG TAGTGCAGGA GTACAAGGCC AAGCTACAAG GGCATGTGGA ACCACTTAGG 
AAGCATCTAG AGGCTGTGCA GAAGATGAAG GCCAAGGAGG AGAGGCGGGT GACAGAGCTG 
AAGAGCCAGA TGAAGTCAGA GCTGGCAGCT GTGGCCTCAG AGTTTGGACG GTTAACACGG 
TTTCTGGCTG AAGAGCAGGC AGGACTAGAA CGGCGCCTCC GGGAGATGCA TGAAGCTCAG 
TTAGGACGTG CAGGAGCAGC AGCCAACCGC CTTGAAGAGC AGGCTGTCCA GCTAAGCCGC 
CTGCTTGCTG AAGCCCAAGA GCGGAGCCAA CAGGGGGGCC TGCGGCTATT GCAAGACATC 
AAGGAGACTT TCAATAGGTG TGAAGAGATA CAGTTGCAGC CCCCAGAGAT TTGGTCCCCT 
GACCCATGCC AACCCCATAG CCACGACTTT CTGACAGACG CCATCGTGAG GAAAATGAGC 
CGGATGTTCT GTCAGGCTGC AAGAGTGGAC CTGACACTGG ACCCAGACAC AGCTCACCCG 
GCTCTGCTGC TGTCCCCTGA TCGCCGTGGA GTCCGCTTGG CAGAACGTCG GCAGGAGGTT 
CCTGAACATT CCAAGCGCTT TTCAGCAGAC TGCTGTGTAC TAGGGGCCCA GGGCTTCCGC 
TCGGGCCGGC ACTACTGGGA GGTAGAGGTG GGTGGGCGGC GGGGCTGGGC AGTGGGTGCT 
GCCCGTGAAT CAACCCATCA TAAAGAAAAA GTGGGCTCTG GGGGGTCCTC TGTTAGCAGT 
GGGGATGCCA GCTCCTCACG CCATCACCAT CGCCGCCGCC GGCTCCATCT GCCTCAGCAG 
CTCCTGCTTC AGCGGGAAGT GTGGTGCGTG GGCACCCACG GCAAACGATA CCAGGCGCAG 
AGCTCAACAG AGCAGACACT GCTGAGCCCA TGTGAGAAAC CACGGCGTTT CGGCGTGTAC 
CTGGACTATG AGGCTGGGCG CCTGGGCTTC TACAACGCAG ATACCTTAGC TCATGTACAC 
ACCTTCTCAG CTGCCTTTCT TGGCGAGCGT GTTTTTCCTT TCTTCCGGGT ACTTTCCAAG 
GGTACCCGCA TCAAGCTCTG CCCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Characterization and Genetic Analyses of New Genes Coding for NOD2 Interacting Proteins.
PloS one11(11)e0165420(2016)
Thi?baut R,Esmiol S,Lecine P,Mahfouz B,Hermant A,Nicoletti C,Parnis S,Perroy J,Borg JP,Pascoe L,Hugot JP,Ollendorff V

Systematic analysis of dimeric E3-RING interactions reveals increased combinatorial complexity in human ubiquitination networks.
Molecular & cellular proteomics : MCP11(7)M111.016162(2012 Jul)
Woodsmith J,Jenn RC,Sanderson CM

Amplitude control of protein kinase C by RINCK, a novel E3 ubiquitin ligase.
The Journal of biological chemistry282(46)33776-87(2007 Nov)
Chen D,Gould C,Garza R,Gao T,Hampton RY,Newton AC