COL6A1 cDNA ORF clone, Pseudopodoces humilis(Tibetan ground-tit)

Gene
Clones
gRNAs

Summary

Gene Symbol	COL6A1
Entrez Gene ID	102111230
Full Name	collagen type VI alpha 1 chain
Gene Type	protein-coding
Organism	Pseudopodoces humilis(Tibetan ground-tit)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005532690.2	XP_005532747.1	collagen alpha-1(VI) chain

Pathways from BioSystems
Gene Ontology

The following COL6A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL6A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPs26194	XM_005532690.2 Latest version!	Pseudopodoces humilis collagen, type VI, alpha 1 (COL6A1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$629.30 $899.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

COL6A1 ( XM_005532690.2 ) cDNA ORF clone, Pseudopodoces humilis(Tibetan ground-tit) -> XP_005532747.1 Pseudopodoces humilis collagen, type VI, alpha 1 (COL6A1), mRNA.

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CloneID	OPs26194
Clone ID Related Accession (Same CDS sequence)	XM_005532690.2
Accession Version	XM_005532690.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3072bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-09-20
Organism	Pseudopodoces humilis(Tibetan ground-tit)
Product	collagen alpha-1(VI) chain
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005087683.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Sep 21, 2015 this sequence version replaced XM_005532690.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pseudopodoces humilis Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAGGCTGC AAGACTTTCT GCTCACTCTG CTGCTCCCAG CCGGATTCCT GTGGGGGGGC 
TCATGTGCTC AGCGCCCAGA AATCATCACC CAAGTCTCAA GTGCAGAAGA CTGCCCTGTG 
GACCTGTTCT TCGTCCTGGA CACCTCAGAG AGTGTTGCCC TGAGGGTGAA GCCTTTTGGG 
GACCTGGTTA CCCAAGTGAA AGATTTCACC AACCGGTTCA TTGATAAGCT GACCCAGAGG 
TACTACCGCT GTGACCGCAA CCTGGTGTGG AACGCAGGAG CGCTGCACTA CAGTGATGAG 
GTGGTGCTCA TCAAGAGCCT CACACCAATG CCCAGCGGGC AGAGCGAGCT GAAGAACCGC 
GTGTCGGCCA TCAACTACAT CGGGAAGGGC ACCTACACCG ACTGTGCCAT AAAGCGCGGC 
ATCGAGGAGC TGCTCATTGG TGGGTCCCAT CACAAGGAGA ATAAGTACCT GATCGTGGTG 
ACTGATGGAC ATCCCTTGGA AGGTTACAAG GAGCCCTGTG GAGGCCTGGA TGATGCTGCC 
AATGAAGCCA AACTCCTGGG GATCAAAGTG TTCTCTGTTG CCATCTCCCC CAACCACTTG 
GACCAGCGGC TGAACATCAT CGCCACAGAC CACGCCTACC GCCGCAACTT CACTGCCACC 
AGCCTGAAGC CCACCCGGGA AATAGATGTG GAGGAGACCA TCAACACCAT CATAGACATG 
ATTAAACTCA ACACGGAGCA ATCGTGCTGC TCCTTTGAGT GCCAGCCTCC CCGAGGGCCC 
CTCGGACCTC CTGGTGACCG TGGCCATGAG GGAGAACGAG GCAAGCCAGG TCTTCCCGGC 
CAGAAAGGAG AGGCTGGAGA CCCAGGCAGG CCAGGAGACA TGGGACCTGT TGGCTACCAA 
GGAATGAAGG GTGACAAAGG AAGCCGAGGA GAAAAGGGCT CAAGAGGAGC CAAAGGAGCC 
AAGGGTGAGA AAGGCAGACG TGGAATCGAT GGCATTGATG GCATGAAGGG TGAAGCTGGA 
TACCCCGGAT TACCTGGCTG CAAGGGCTCA CCTGGATTCG ATGGAGCTCA AGGCCCACCT 
GGACCGAAGG GAGATCCTGG TGCTTTTGGA CCCAAGGGAG CAAAGGGGGA GCCCGGGAAT 
GACGGAAAGC CTGGCCGACA GGGGATTCCT GGCAACCCTG GAGAGAAGGG CGCTCCTGGG 
AACCGGGGTG AGCCTGGACC AGCAGGAGAG ACTGGTGATG AGGGTGCTCT AGGTGAGGAT 
GGTCCTCCTG GAGAACGGGG CAGCAATGGA GAGAGAGGAC CCCCAGGCTC ACCGGGTGAT 
CGCGGGCCAA GAGGAGAGCT GGGAGAGCCC GGACCACCTG GTGACCAAGG GCGGGAAGGA 
CCCCTTGGAC CACCTGGCGA CCAGGGTGAG CCCGGACCCC CAGGACCCAA AGGCTACAGG 
GGAGATGACG GCCCCCCCGG CAGTGAGGGC CCAAAGGGAT TGCCTGGAGC ACCAGGGCTG 
CCTGGGGACC CTGGGCTGAT GGGAGAAAGG GGGGAGGATG GTCCTCCTGG GAATGGCACA 
ATTGGATTCA CAGGTGCCCC AGGGCAGCCA GGAGACAGAG GCAACCCTGG CATTAATGGA 
ACAAAAGGCT ATGTTGGACC TAAAGGTGAT GAAGGGGAAG CTGGCGACCC TGGCAACGAT 
AACCTGACCC CTGGGCCCAG TGGCATCAAA GGAGCAAAGG GCCACAGGGG ACGTGAAGGT 
CCCCCGGGAC CACCAGGACC CACGGGGCCT CCAGGACCAG ATGAATGTGA AATCTTGGAT 
ATCATCATGA AGATGTGCTC TTGCTGTGAG TGCACCTGTG GCCCCGTCGA CCTCCTGTTT 
GTTTTGGACA GCTCAGAGAG CATTGGCCTG CAGAACTTCC AGATTGCCAA GGACTTTATC 
ATCAAAGTCA TCGACCGCCT GAGCAAGGAT GAGCGAGTCA AGTTTGAAGC TGGGGAGTCC 
CGTGTGGGCG TTGTGCAGTA CAGCCATGAC AACACACAAG AACTGGTGGC CATGGGGGAT 
GCCAACATCG ACAACATCGG GGCACTCAAG CAGGCAGTCA AGAACCTGCA GTGGATTGCT 
GGGGGCACCT ACACTGGGGA GGCTCTGCAG TTCACCAAGG ACAACCTGCT GCAGAGGTTC 
ACATCCGACA AGCGCGTAGC CATCGTCATC ACAGACGGGC GCTCTGACAC CCTGCGGGAC 
CCCACGCCGC TCAACTCCCT GTGCGATGTC ACCCCGGTGG TTTCCCTTGG GATCGGTGAC 
ATTTTCCGGA ACCCTCCAAA TCCAGATCAC TTGAATGACA TCGCATGTTT AAGCAGACCA 
ACCAGGCCGG GACTGTCCAT TCAAAGGGAC AACTATGCTG AGCTCCTGGA TGACACCTTC 
TTGCAGAACA TCACCTCGTA CGTCTGCCAA GAGAAAAAAT GTCCTGACTA CACCTGCCCA 
ATCACCTTCA CTGGGCCAGC AGACATCACA CTGCTGGTGG ACAGCTCCAC CAGCGTGGGG 
AGCAAAAACT TTGAGACCAC CAAGAAGTTT GTGAAGCAGC TGGCGGAGCG GTTCCTGGAG 
GCCAGCAAGC CCACCGACGA CTCTGTGCGC GTCTCGGTGG TGCAGTACAG CGGCCGGAAT 
CAGCAGAAAG TGGAAGCTCA GTTCCAGTAC AACTACACAG TCATTGCCAA GGCCATCGAT 
AACATGGAAT TCATGAACGA TGCCACAGAC GTGAACTCTG CTCTGCAGTT CATCACAGAG 
CTGTACCGGC GCTCTGCCCG CGCTGCAGCC AAGAAGAGGG TACTGGTGTT TTCTGATGGA 
CACTCCCAAG GGATCACTGC CAGGGCCATT GAGAGGGCTG TGCAGGATGC ACAGAAGGCT 
GATATTGAGA TATATGTTCT AGCAGTGGGC AGCCAAGCCA ACGAGCCAAA CATCCGTGTC 
CTGGTCACAG GGAAAAGCAC AGATTACGAC GTGGCTTATG GGGAGCGGCA CCTTTTCCGT 
GTGCCCGACT ACACCTCTCT GCTGCGTGGT GTCTTCTACC AAACTGTCTC CAGGAAGATA 
GCTGTTGACT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005532747.1
CDS	145..3216
Translation	MRLQDFLLTLLLPAGFLWGGSCAQRPEIITQVSSAEDCPVDLFFVLDTSESVALRVKPFGDLVTQVKDFTNRFIDKLTQRYYRCDRNLVWNAGALHYSDEVVLIKSLTPMPSGQSELKNRVSAINYIGKGTYTDCAIKRGIEELLIGGSHHKENKYLIVVTDGHPLEGYKEPCGGLDDAANEAKLLGIKVFSVAISPNHLDQRLNIIATDHAYRRNFTATSLKPTREIDVEETINTIIDMIKLNTEQSCCSFECQPPRGPLGPPGDRGHEGERGKPGLPGQKGEAGDPGRPGDMGPVGYQGMKGDKGSRGEKGSRGAKGAKGEKGRRGIDGIDGMKGEAGYPGLPGCKGSPGFDGAQGPPGPKGDPGAFGPKGAKGEPGNDGKPGRQGIPGNPGEKGAPGNRGEPGPAGETGDEGALGEDGPPGERGSNGERGPPGSPGDRGPRGELGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPPGSEGPKGLPGAPGLPGDPGLMGERGEDGPPGNGTIGFTGAPGQPGDRGNPGINGTKGYVGPKGDEGEAGDPGNDNLTPGPSGIKGAKGHRGREGPPGPPGPTGPPGPDECEILDIIMKMCSCCECTCGPVDLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEAGESRVGVVQYSHDNTQELVAMGDANIDNIGALKQAVKNLQWIAGGTYTGEALQFTKDNLLQRFTSDKRVAIVITDGRSDTLRDPTPLNSLCDVTPVVSLGIGDIFRNPPNPDHLNDIACLSRPTRPGLSIQRDNYAELLDDTFLQNITSYVCQEKKCPDYTCPITFTGPADITLLVDSSTSVGSKNFETTKKFVKQLAERFLEASKPTDDSVRVSVVQYSGRNQQKVEAQFQYNYTVIAKAIDNMEFMNDATDVNSALQFITELYRRSARAAAKKRVLVFSDGHSQGITARAIERAVQDAQKADIEIYVLAVGSQANEPNIRVLVTGKSTDYDVAYGERHLFRVPDYTSLLRGVFYQTVSRKIAVD

Target ORF information:

RefSeq Version	XM_005532690.2
Organism	Pseudopodoces humilis(Tibetan ground-tit)
Definition	Pseudopodoces humilis collagen, type VI, alpha 1 (COL6A1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005532690.2

ORF Insert Sequence:

ATGAGGCTGC AAGACTTTCT GCTCACTCTG CTGCTCCCAG CCGGATTCCT GTGGGGGGGC 
TCATGTGCTC AGCGCCCAGA AATCATCACC CAAGTCTCAA GTGCAGAAGA CTGCCCTGTG 
GACCTGTTCT TCGTCCTGGA CACCTCAGAG AGTGTTGCCC TGAGGGTGAA GCCTTTTGGG 
GACCTGGTTA CCCAAGTGAA AGATTTCACC AACCGGTTCA TTGATAAGCT GACCCAGAGG 
TACTACCGCT GTGACCGCAA CCTGGTGTGG AACGCAGGAG CGCTGCACTA CAGTGATGAG 
GTGGTGCTCA TCAAGAGCCT CACACCAATG CCCAGCGGGC AGAGCGAGCT GAAGAACCGC 
GTGTCGGCCA TCAACTACAT CGGGAAGGGC ACCTACACCG ACTGTGCCAT AAAGCGCGGC 
ATCGAGGAGC TGCTCATTGG TGGGTCCCAT CACAAGGAGA ATAAGTACCT GATCGTGGTG 
ACTGATGGAC ATCCCTTGGA AGGTTACAAG GAGCCCTGTG GAGGCCTGGA TGATGCTGCC 
AATGAAGCCA AACTCCTGGG GATCAAAGTG TTCTCTGTTG CCATCTCCCC CAACCACTTG 
GACCAGCGGC TGAACATCAT CGCCACAGAC CACGCCTACC GCCGCAACTT CACTGCCACC 
AGCCTGAAGC CCACCCGGGA AATAGATGTG GAGGAGACCA TCAACACCAT CATAGACATG 
ATTAAACTCA ACACGGAGCA ATCGTGCTGC TCCTTTGAGT GCCAGCCTCC CCGAGGGCCC 
CTCGGACCTC CTGGTGACCG TGGCCATGAG GGAGAACGAG GCAAGCCAGG TCTTCCCGGC 
CAGAAAGGAG AGGCTGGAGA CCCAGGCAGG CCAGGAGACA TGGGACCTGT TGGCTACCAA 
GGAATGAAGG GTGACAAAGG AAGCCGAGGA GAAAAGGGCT CAAGAGGAGC CAAAGGAGCC 
AAGGGTGAGA AAGGCAGACG TGGAATCGAT GGCATTGATG GCATGAAGGG TGAAGCTGGA 
TACCCCGGAT TACCTGGCTG CAAGGGCTCA CCTGGATTCG ATGGAGCTCA AGGCCCACCT 
GGACCGAAGG GAGATCCTGG TGCTTTTGGA CCCAAGGGAG CAAAGGGGGA GCCCGGGAAT 
GACGGAAAGC CTGGCCGACA GGGGATTCCT GGCAACCCTG GAGAGAAGGG CGCTCCTGGG 
AACCGGGGTG AGCCTGGACC AGCAGGAGAG ACTGGTGATG AGGGTGCTCT AGGTGAGGAT 
GGTCCTCCTG GAGAACGGGG CAGCAATGGA GAGAGAGGAC CCCCAGGCTC ACCGGGTGAT 
CGCGGGCCAA GAGGAGAGCT GGGAGAGCCC GGACCACCTG GTGACCAAGG GCGGGAAGGA 
CCCCTTGGAC CACCTGGCGA CCAGGGTGAG CCCGGACCCC CAGGACCCAA AGGCTACAGG 
GGAGATGACG GCCCCCCCGG CAGTGAGGGC CCAAAGGGAT TGCCTGGAGC ACCAGGGCTG 
CCTGGGGACC CTGGGCTGAT GGGAGAAAGG GGGGAGGATG GTCCTCCTGG GAATGGCACA 
ATTGGATTCA CAGGTGCCCC AGGGCAGCCA GGAGACAGAG GCAACCCTGG CATTAATGGA 
ACAAAAGGCT ATGTTGGACC TAAAGGTGAT GAAGGGGAAG CTGGCGACCC TGGCAACGAT 
AACCTGACCC CTGGGCCCAG TGGCATCAAA GGAGCAAAGG GCCACAGGGG ACGTGAAGGT 
CCCCCGGGAC CACCAGGACC CACGGGGCCT CCAGGACCAG ATGAATGTGA AATCTTGGAT 
ATCATCATGA AGATGTGCTC TTGCTGTGAG TGCACCTGTG GCCCCGTCGA CCTCCTGTTT 
GTTTTGGACA GCTCAGAGAG CATTGGCCTG CAGAACTTCC AGATTGCCAA GGACTTTATC 
ATCAAAGTCA TCGACCGCCT GAGCAAGGAT GAGCGAGTCA AGTTTGAAGC TGGGGAGTCC 
CGTGTGGGCG TTGTGCAGTA CAGCCATGAC AACACACAAG AACTGGTGGC CATGGGGGAT 
GCCAACATCG ACAACATCGG GGCACTCAAG CAGGCAGTCA AGAACCTGCA GTGGATTGCT 
GGGGGCACCT ACACTGGGGA GGCTCTGCAG TTCACCAAGG ACAACCTGCT GCAGAGGTTC 
ACATCCGACA AGCGCGTAGC CATCGTCATC ACAGACGGGC GCTCTGACAC CCTGCGGGAC 
CCCACGCCGC TCAACTCCCT GTGCGATGTC ACCCCGGTGG TTTCCCTTGG GATCGGTGAC 
ATTTTCCGGA ACCCTCCAAA TCCAGATCAC TTGAATGACA TCGCATGTTT AAGCAGACCA 
ACCAGGCCGG GACTGTCCAT TCAAAGGGAC AACTATGCTG AGCTCCTGGA TGACACCTTC 
TTGCAGAACA TCACCTCGTA CGTCTGCCAA GAGAAAAAAT GTCCTGACTA CACCTGCCCA 
ATCACCTTCA CTGGGCCAGC AGACATCACA CTGCTGGTGG ACAGCTCCAC CAGCGTGGGG 
AGCAAAAACT TTGAGACCAC CAAGAAGTTT GTGAAGCAGC TGGCGGAGCG GTTCCTGGAG 
GCCAGCAAGC CCACCGACGA CTCTGTGCGC GTCTCGGTGG TGCAGTACAG CGGCCGGAAT 
CAGCAGAAAG TGGAAGCTCA GTTCCAGTAC AACTACACAG TCATTGCCAA GGCCATCGAT 
AACATGGAAT TCATGAACGA TGCCACAGAC GTGAACTCTG CTCTGCAGTT CATCACAGAG 
CTGTACCGGC GCTCTGCCCG CGCTGCAGCC AAGAAGAGGG TACTGGTGTT TTCTGATGGA 
CACTCCCAAG GGATCACTGC CAGGGCCATT GAGAGGGCTG TGCAGGATGC ACAGAAGGCT 
GATATTGAGA TATATGTTCT AGCAGTGGGC AGCCAAGCCA ACGAGCCAAA CATCCGTGTC 
CTGGTCACAG GGAAAAGCAC AGATTACGAC GTGGCTTATG GGGAGCGGCA CCTTTTCCGT 
GTGCCCGACT ACACCTCTCT GCTGCGTGGT GTCTTCTACC AAACTGTCTC CAGGAAGATA 
GCTGTTGACT GA