LOC7494262 cDNA ORF clone, Populus trichocarpa(black cottonwood)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC7494262
Entrez Gene ID	7494262
Full Name	hypothetical protein
Synonyms	POPTRDRAFT_875946
Gene Type	protein-coding
Organism	Populus trichocarpa(black cottonwood)

mRNA and Protein(s)

mRNA	Protein	Name
XM_002312939.2	XP_002312975.2	hypothetical protein
XM_024608787.1	XP_024464555.1	translocase of chloroplast 120, chloroplastic

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapman J, Chen GL, Cooper D, Coutinho PM, Couturier J, Covert S, Cronk Q, Cunningham R, Davis J, Degroeve S, D?jardin A, Depamphilis C, Detter J, Dirks B, Dubchak I, Duplessis S, Ehlting J, Ellis B, Gendler K, Goodstein D, Gribskov M, Grimwood J, Groover A, Gunter L, Hamberger B, Heinze B, Helariutta Y, Henrissat B, Holligan D, Holt R, Huang W, Islam-Faridi N, Jones S, Jones-Rhoades M, Jorgensen R, Joshi C, Kangasj?rvi J, Karlsson J, Kelleher C, Kirkpatrick R, Kirst M, Kohler A, Kalluri U, Larimer F, Leebens-Mack J, Lepl? JC, Locascio P, Lou Y, Lucas S, Martin F, Montanini B, Napoli C, Nelson DR, Nelson C, Nieminen K, Nilsson O, Pereda V, Peter G, Philippe R, Pilate G, Poliakov A, Razumovskaya J, Richardson P, Rinaldi C, Ritland K, Rouz? P, Ryaboy D, Schmutz J, Schrader J, Segerman B, Shin H, Siddiqui A, Sterky F, Terry A, Tsai CJ, Uberbacher E, Unneberg P, Vahala J, Wall K, Wessler S, Yang G, Yin T, Douglas C, Marra M, Sandberg G, Van de Peer Y, Rokhsar D
Science (New York, N.Y.)313(5793)1596-604(2006 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC7494262 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7494262 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPa436511	XM_024608787.1 Latest version!	Populus trichocarpa translocase of chloroplast 120, chloroplastic (LOC7494262), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00
OPa21926	XM_002312939.2 Latest version!	Populus trichocarpa hypothetical protein (POPTR_0009s13380g) mRNA, complete cds.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00

ORF Online Only Promotion

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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC7494262 ( XM_024608787.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024464555.1 Populus trichocarpa translocase of chloroplast 120, chloroplastic (LOC7494262), mRNA.

Price & Availability↑

CloneID	OPa436511
Clone ID Related Accession (Same CDS sequence)	XM_024608787.1
Accession Version	XM_024608787.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3483bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-04-08
Organism	Populus trichocarpa(black cottonwood)
Product	translocase of chloroplast 120, chloroplastic
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037293.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAAAATG GAATTGATAG AGTTGTCGAT GCGACGCAAT TAGAAAACAA CATCAATGTT 
AACACTGAAG TTTCTAGGGA TAAGGTGGAG GATAAATATG AGGTTTTGGG TGGCGCGGTG 
GAGGGAACAA ATGAGTTGTT GGGGGATAAG GTAGAGGAGA AGGTTGCGGT GGCGTCCAGT 
GAATCGAAGG ATTTGGAAGA TGAGGTTTTT GTGGAGGCAC TTGAGTCAAC CGAGAAATTG 
CATGAAGAGG GAGTGAAGTT TGAGTCAGAT GGTGGTGTTG AGAGTGTTGG TGACTCGAGT 
TTGGTGGTTG GGAATGCAAA TTTGGATGTG GGAAATGAAA TGGAGAAATT TGAGGCACAT 
GAGTCAGAAG GTGGTGATTC TGGTTCAGTA GTTGTCATTG AGAAATCAGA TGTAGGAAGT 
ATGATGGACA AATTTGAAGA GCCGGTTTTT GTTCCTGCTG AGCCTGGGAA TCCCGAGGGG 
TTGACTGAGG TGGTTGGTGA AGAGAAGGTG GTGGATTCGG TAGGTGGAGA GAGTGTCCGT 
AAGATTGACG AGGGAGGGAC TGTTGTGGAA GTGGAGGGCA GTGTGTTGAA TGGAGGGGAG 
GTTGTTTCAG TTGAGCTTCA AGACAGAAAA GGTGAAGGAC TTCATGAGAA TCCGGTGAAA 
GTTGATACAG AAGACCAGGA TGACAAAAGT GGGGAATTGA TAGGGGATTC AGCTGGCCTT 
GATTCGGAGG ATGGGATTCA CAAGGGTGGG CATCCAAAGG GCATTTCAGC AACTGTTGAT 
ACAGAACACG GAGATACCAG CAATGGAGAC TTGAAAGATA CTATAGCTTC AGTGGATCCA 
GAGCATCATG AGGAAACTCC TGAACTGACA GCTACTTCAG CTGTCCCACA TACAGCCCTG 
GAAGAATCAA CGGTGGTAGC GGAAACCGGA AGCTTAAATT CTTTAGATAA GTTTGTGAAT 
GAGAAAAATG AAGACATTCA GGCAGATACT GCTAATTTGA GAGCAGAGGA TAACAAGGAT 
TCTGAACCAG AGCATGCTGC TGAAAAAGGT AATGATGCTG GCCAGAACAA TATTGTGTCT 
GGGCACCCTG AAAGGATTGC AGAAACATAT CCAGAGAAGC AAAACACTCC AGTAAATAAA 
GAAGGTGAAA GGCACCCTGA ACCTAAGCTT GCCTCTTTAT CTGGAAAATC TTTGCGTCCT 
CCCTCCCTTT CCCATCCAGC TGGCCTTGGG CGTGCTGCCC CACTCCTGGA ACCTGCAACT 
AGGGCAATGC AGCAGTTGCG TGCTAATGGA GCCATGTCTC ATATGCGCCC TCAACAGCTT 
GATGACCCTA CTAATGGGGA GTCAGAGGAG CACGATGAGA CTCATGAAAA ACTCAAGATG 
ATTAGGGTGA AATTTTTGCG GCTAGTGCAT AGGCTTGGAT TGGCTCCCAA TGAAACTGTT 
GTGGCACAGG TTTTATACAG ATTGGGAATC GTTGAGCAGC TGCGAGGGAG AAATCGGGGT 
CGCATTGGCA CCTTAAGTTT TGATCCTGCA AGTGCCATGG CAGGACAGCT TGAGGCAGAT 
GGGCAGGAAC CCCTTGATTT CTCCTGCACA ATTATGGTTC TTGGAAAGAC TGGGGTTGGA 
AAAAGTGCCA CTATCAATTC AATATTTGAT GAAGCAAAGC TCCCCACCAA TGCTTTTCAA 
TCTGGTACAA AAATGGTTCA GGATGTTGTG GGAACTGTTC AGGGGATCAA GTTACGGGTC 
ATTGACACAC CAGGCCTCCT TCCTTCCGGG TCTGACCAGC GACAGAATGA GAAAATCCTT 
CTCTCAGTGA AAAACTTTAT CAAGAAAACT CCTCCAGATA TTGTGTTGTA TTTTGATAGG 
TTGGACATGC AGAGCAAGGA TTTTGGTGAT CTGCCCCTGT TGCGAACCGT CACCAAGATA 
TTCGGTCCAT CTATATGGCA AAATGCAATT GTTGTCCTCA GTCATGCTGC TTCTGCTCCA 
CCTGATAGTC CACAAGGTAC CGTTTCAAGT TATGAAATGT TTGTAACTCA ACGTTCTCAT 
GTTGTTCAAC AAACAATTCG TCAGGCAGCA GGTGATATGT GGCTTGTAAA TCCCGTTTCA 
TTAGTTGAGA ATCACTCTGC GTGTAGAAGA AATAGGGCAG GGCATAGAGT GTTGCCTAAT 
GGTCAGGTTT GGAAGCCTCA ATTGTTGCTA CTTTCCTTTG CATCAAAAAT CCTCGCTGAA 
GCAAACGCTA TATTGAAGGT GCAAGATGGT CCACCTAGGA AGCAATTTGC AACTCGGTCA 
AGAGCTCCTC CTTTACCATA CCTGCTGTCA TCTCTTCTCC GGTCAAGACC ACAAGTTAAG 
CTACCTGAGG AACAGTTTGG TGATGAGGAT GGTTTAGATG ATGATTTGGA CGAGTCATTG 
GATTCTGAGG ATGAGTCTGA ATATGATGAT TTACCACCAT TTAAAAGTTT AACAAAAGCC 
CAGGTGGCAA AGCTTACTAA AGCTCAGAAG AATGCATATT TTGATGAGTT AGAGTACAGG 
GAGAAACTTT TTATGAAGAA ACAGTTGAAG GAAGAGAAAA GGCAACAAAG GATGATGAAG 
AAAACTGCAG TGGCAACCAA TCCTCTGCCT GGTGACTACA GTGAAAATGC AGAAGAAGAA 
AGTGAAGGGC CTGCATCTGT GCCCGTTCCC ATGCCAGATT TATCCTTACC TGCTTCTTTT 
GACTCTGATA ATCCTTCCCA CCGGTACCGT TATCTTGATA ACTCCAATCA GTGGCTTGTA 
AGGCCAGTTC TTGATACACA TGGTTGGGAT CATGATGTTG GCTATGAAGG TATAAATGTG 
GAGAGATTAT TTGTAGTTAA AGACAAGATT CCTGTATCCT TTTCTGGCCA GGTAACGAAG 
GACAAGAAGG ATGCCAATGT TCAAATGGAA TTAGCAAGTT CTATAAAGCA TGGGGAAGGG 
AAATCAACTT CACTAGGTTT TGATATGCAG ACTTTAGGGA AGGACTTGGG CTATACTTTA 
CACAGTGAGA CAAGGTTCAT TAATTTCAGG AAGAACAAGG CAACTGCTGG TCTTTCGGTT 
ACTCTATTGG GTGATGCCTT ATCAGCTGGA GTGAAAGTTG AGGACAAGTT GATTGCTAAT 
AAGCGGTTCC AAATGGTCAT GTCTGGTGGT GCAATGACTG GTCGTGGTGA TGTAGCATAT 
GGTGGTAGTC TGGAGGCCCA ACTGAGAGAT GAAGATTATC CCCTGGGTCG TTCGCTATCC 
ACTCTTGGAC TCTCTGTTGT AGATTGGCAT GGAGTTCTAG CAATTGGTTG CAATATACAA 
TCTCAGGTTC CTATTGGAAG GTCTACAAAC TTGATTGCCC GTGCCAATTT GAATAACAAG 
GGTGCAGGAC AACTCAGTAT TCGCATAAAT AGTTCAGAAC ACCTCCAAAT AGCTTTGGCA 
GGTCTCATTC CTCTATTGAG GAAGCTTTTT GATTATCATG AAGAAATGCA GCTTGGACAA 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_024464555.1
CDS	251..3733
Translation	MENGIDRVVDATQLENNINVNTEVSRDKVEDKYEVLGGAVEGTNELLGDKVEEKVAVASSESKDLEDEVFVEALESTEKLHEEGVKFESDGGVESVGDSSLVVGNANLDVGNEMEKFEAHESEGGDSGSVVVIEKSDVGSMMDKFEEPVFVPAEPGNPEGLTEVVGEEKVVDSVGGESVRKIDEGGTVVEVEGSVLNGGEVVSVELQDRKGEGLHENPVKVDTEDQDDKSGELIGDSAGLDSEDGIHKGGHPKGISATVDTEHGDTSNGDLKDTIASVDPEHHEETPELTATSAVPHTALEESTVVAETGSLNSLDKFVNEKNEDIQADTANLRAEDNKDSEPEHAAEKGNDAGQNNIVSGHPERIAETYPEKQNTPVNKEGERHPEPKLASLSGKSLRPPSLSHPAGLGRAAPLLEPATRAMQQLRANGAMSHMRPQQLDDPTNGESEEHDETHEKLKMIRVKFLRLVHRLGLAPNETVVAQVLYRLGIVEQLRGRNRGRIGTLSFDPASAMAGQLEADGQEPLDFSCTIMVLGKTGVGKSATINSIFDEAKLPTNAFQSGTKMVQDVVGTVQGIKLRVIDTPGLLPSGSDQRQNEKILLSVKNFIKKTPPDIVLYFDRLDMQSKDFGDLPLLRTVTKIFGPSIWQNAIVVLSHAASAPPDSPQGTVSSYEMFVTQRSHVVQQTIRQAAGDMWLVNPVSLVENHSACRRNRAGHRVLPNGQVWKPQLLLLSFASKILAEANAILKVQDGPPRKQFATRSRAPPLPYLLSSLLRSRPQVKLPEEQFGDEDGLDDDLDESLDSEDESEYDDLPPFKSLTKAQVAKLTKAQKNAYFDELEYREKLFMKKQLKEEKRQQRMMKKTAVATNPLPGDYSENAEEESEGPASVPVPMPDLSLPASFDSDNPSHRYRYLDNSNQWLVRPVLDTHGWDHDVGYEGINVERLFVVKDKIPVSFSGQVTKDKKDANVQMELASSIKHGEGKSTSLGFDMQTLGKDLGYTLHSETRFINFRKNKATAGLSVTLLGDALSAGVKVEDKLIANKRFQMVMSGGAMTGRGDVAYGGSLEAQLRDEDYPLGRSLSTLGLSVVDWHGVLAIGCNIQSQVPIGRSTNLIARANLNNKGAGQLSIRINSSEHLQIALAGLIPLLRKLFDYHEEMQLGQ

Target ORF information:

RefSeq Version	XM_024608787.1
Organism	Populus trichocarpa(black cottonwood)
Definition	Populus trichocarpa translocase of chloroplast 120, chloroplastic (LOC7494262), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_024608787.1

ORF Insert Sequence:

ATGGAAAATG GAATTGATAG AGTTGTCGAT GCGACGCAAT TAGAAAACAA CATCAATGTT 
AACACTGAAG TTTCTAGGGA TAAGGTGGAG GATAAATATG AGGTTTTGGG TGGCGCGGTG 
GAGGGAACAA ATGAGTTGTT GGGGGATAAG GTAGAGGAGA AGGTTGCGGT GGCGTCCAGT 
GAATCGAAGG ATTTGGAAGA TGAGGTTTTT GTGGAGGCAC TTGAGTCAAC CGAGAAATTG 
CATGAAGAGG GAGTGAAGTT TGAGTCAGAT GGTGGTGTTG AGAGTGTTGG TGACTCGAGT 
TTGGTGGTTG GGAATGCAAA TTTGGATGTG GGAAATGAAA TGGAGAAATT TGAGGCACAT 
GAGTCAGAAG GTGGTGATTC TGGTTCAGTA GTTGTCATTG AGAAATCAGA TGTAGGAAGT 
ATGATGGACA AATTTGAAGA GCCGGTTTTT GTTCCTGCTG AGCCTGGGAA TCCCGAGGGG 
TTGACTGAGG TGGTTGGTGA AGAGAAGGTG GTGGATTCGG TAGGTGGAGA GAGTGTCCGT 
AAGATTGACG AGGGAGGGAC TGTTGTGGAA GTGGAGGGCA GTGTGTTGAA TGGAGGGGAG 
GTTGTTTCAG TTGAGCTTCA AGACAGAAAA GGTGAAGGAC TTCATGAGAA TCCGGTGAAA 
GTTGATACAG AAGACCAGGA TGACAAAAGT GGGGAATTGA TAGGGGATTC AGCTGGCCTT 
GATTCGGAGG ATGGGATTCA CAAGGGTGGG CATCCAAAGG GCATTTCAGC AACTGTTGAT 
ACAGAACACG GAGATACCAG CAATGGAGAC TTGAAAGATA CTATAGCTTC AGTGGATCCA 
GAGCATCATG AGGAAACTCC TGAACTGACA GCTACTTCAG CTGTCCCACA TACAGCCCTG 
GAAGAATCAA CGGTGGTAGC GGAAACCGGA AGCTTAAATT CTTTAGATAA GTTTGTGAAT 
GAGAAAAATG AAGACATTCA GGCAGATACT GCTAATTTGA GAGCAGAGGA TAACAAGGAT 
TCTGAACCAG AGCATGCTGC TGAAAAAGGT AATGATGCTG GCCAGAACAA TATTGTGTCT 
GGGCACCCTG AAAGGATTGC AGAAACATAT CCAGAGAAGC AAAACACTCC AGTAAATAAA 
GAAGGTGAAA GGCACCCTGA ACCTAAGCTT GCCTCTTTAT CTGGAAAATC TTTGCGTCCT 
CCCTCCCTTT CCCATCCAGC TGGCCTTGGG CGTGCTGCCC CACTCCTGGA ACCTGCAACT 
AGGGCAATGC AGCAGTTGCG TGCTAATGGA GCCATGTCTC ATATGCGCCC TCAACAGCTT 
GATGACCCTA CTAATGGGGA GTCAGAGGAG CACGATGAGA CTCATGAAAA ACTCAAGATG 
ATTAGGGTGA AATTTTTGCG GCTAGTGCAT AGGCTTGGAT TGGCTCCCAA TGAAACTGTT 
GTGGCACAGG TTTTATACAG ATTGGGAATC GTTGAGCAGC TGCGAGGGAG AAATCGGGGT 
CGCATTGGCA CCTTAAGTTT TGATCCTGCA AGTGCCATGG CAGGACAGCT TGAGGCAGAT 
GGGCAGGAAC CCCTTGATTT CTCCTGCACA ATTATGGTTC TTGGAAAGAC TGGGGTTGGA 
AAAAGTGCCA CTATCAATTC AATATTTGAT GAAGCAAAGC TCCCCACCAA TGCTTTTCAA 
TCTGGTACAA AAATGGTTCA GGATGTTGTG GGAACTGTTC AGGGGATCAA GTTACGGGTC 
ATTGACACAC CAGGCCTCCT TCCTTCCGGG TCTGACCAGC GACAGAATGA GAAAATCCTT 
CTCTCAGTGA AAAACTTTAT CAAGAAAACT CCTCCAGATA TTGTGTTGTA TTTTGATAGG 
TTGGACATGC AGAGCAAGGA TTTTGGTGAT CTGCCCCTGT TGCGAACCGT CACCAAGATA 
TTCGGTCCAT CTATATGGCA AAATGCAATT GTTGTCCTCA GTCATGCTGC TTCTGCTCCA 
CCTGATAGTC CACAAGGTAC CGTTTCAAGT TATGAAATGT TTGTAACTCA ACGTTCTCAT 
GTTGTTCAAC AAACAATTCG TCAGGCAGCA GGTGATATGT GGCTTGTAAA TCCCGTTTCA 
TTAGTTGAGA ATCACTCTGC GTGTAGAAGA AATAGGGCAG GGCATAGAGT GTTGCCTAAT 
GGTCAGGTTT GGAAGCCTCA ATTGTTGCTA CTTTCCTTTG CATCAAAAAT CCTCGCTGAA 
GCAAACGCTA TATTGAAGGT GCAAGATGGT CCACCTAGGA AGCAATTTGC AACTCGGTCA 
AGAGCTCCTC CTTTACCATA CCTGCTGTCA TCTCTTCTCC GGTCAAGACC ACAAGTTAAG 
CTACCTGAGG AACAGTTTGG TGATGAGGAT GGTTTAGATG ATGATTTGGA CGAGTCATTG 
GATTCTGAGG ATGAGTCTGA ATATGATGAT TTACCACCAT TTAAAAGTTT AACAAAAGCC 
CAGGTGGCAA AGCTTACTAA AGCTCAGAAG AATGCATATT TTGATGAGTT AGAGTACAGG 
GAGAAACTTT TTATGAAGAA ACAGTTGAAG GAAGAGAAAA GGCAACAAAG GATGATGAAG 
AAAACTGCAG TGGCAACCAA TCCTCTGCCT GGTGACTACA GTGAAAATGC AGAAGAAGAA 
AGTGAAGGGC CTGCATCTGT GCCCGTTCCC ATGCCAGATT TATCCTTACC TGCTTCTTTT 
GACTCTGATA ATCCTTCCCA CCGGTACCGT TATCTTGATA ACTCCAATCA GTGGCTTGTA 
AGGCCAGTTC TTGATACACA TGGTTGGGAT CATGATGTTG GCTATGAAGG TATAAATGTG 
GAGAGATTAT TTGTAGTTAA AGACAAGATT CCTGTATCCT TTTCTGGCCA GGTAACGAAG 
GACAAGAAGG ATGCCAATGT TCAAATGGAA TTAGCAAGTT CTATAAAGCA TGGGGAAGGG 
AAATCAACTT CACTAGGTTT TGATATGCAG ACTTTAGGGA AGGACTTGGG CTATACTTTA 
CACAGTGAGA CAAGGTTCAT TAATTTCAGG AAGAACAAGG CAACTGCTGG TCTTTCGGTT 
ACTCTATTGG GTGATGCCTT ATCAGCTGGA GTGAAAGTTG AGGACAAGTT GATTGCTAAT 
AAGCGGTTCC AAATGGTCAT GTCTGGTGGT GCAATGACTG GTCGTGGTGA TGTAGCATAT 
GGTGGTAGTC TGGAGGCCCA ACTGAGAGAT GAAGATTATC CCCTGGGTCG TTCGCTATCC 
ACTCTTGGAC TCTCTGTTGT AGATTGGCAT GGAGTTCTAG CAATTGGTTG CAATATACAA 
TCTCAGGTTC CTATTGGAAG GTCTACAAAC TTGATTGCCC GTGCCAATTT GAATAACAAG 
GGTGCAGGAC AACTCAGTAT TCGCATAAAT AGTTCAGAAC ACCTCCAAAT AGCTTTGGCA 
GGTCTCATTC CTCTATTGAG GAAGCTTTTT GATTATCATG AAGAAATGCA GCTTGGACAA 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC7494262 ( XM_002312939.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002312975.2 Populus trichocarpa hypothetical protein (POPTR_0009s13380g) mRNA, complete cds.

Price & Availability↑

CloneID	OPa21926
Clone ID Related Accession (Same CDS sequence)	XM_002312939.2
Accession Version	XM_002312939.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3408bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2013-12-30
Organism	Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
Product	hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008475). On Dec 16, 2013 this sequence version replaced XM_002312939.1.

ATGGAAAATG GAATTGATAG AGTTGTCGAT GCGACGCAAT TAGAAAACAA CATCAATGTT 
AACACTGAAG TTTCTAGGGA TAAGGTGGAG GATAAATATG AGGTTTTGGG TGGCGCGGTG 
GAGGGAACAA ATGAGTTGTT GGGGGATAAG GTAGAGGAGA AGGTTGCGGT GGCGTCCAGT 
GAATCGAAGG ATTTGGAAGA TGAGGTTTTT GTGGAGGCAC TTGAGTCAAC CGAGAAATTG 
CATGAAGAGG GAGTGAAGTT TGAGTCAGAT GGTGGTGTTG AGAGTGTTGG TGACTCGAGT 
TTGGTGGTTG GGAATGCAAA TTTGGATGTG GGAAATGAAA TGGAGAAATT TGAGGCACAT 
GAGTCAGAAG GTGGTGATTC TGGTTCAGTA GTTGTCATTG AGAAATCAGA TGTAGGAAGT 
ATGATGGACA AATTTGAAGA GCCGGTTTTT GTTCCTGCTG AGCCTGGGAA TCCCGAGGGG 
TTGACTGAGG TGGTTGGTGA AGAGAAGGTG GTGGATTCGG TAGGTGGAGA GAGTGTCCGT 
AAGATTGACG AGGGAGGGAC TGTTGTGGAA GTGGAGGGCA GTGTGTTGAA TGGAGGGGAG 
GTTGTTTCAG TTGAGCTTCA AGACAGAAAA GGTGAAGGAC TTCATGAGAA TCCGGTGAAA 
GTTGATACAG AAGACCAGGA TGACAAAAGT GGGGAATTGA TAGGGGATTC AGCTGGCCTT 
GATTCGGAGG ATGGGATTCA CAAGGGTGGG CATCCAAAGG GCATTTCAGC AACTGTTGAT 
ACAGAACACG GAGATACCAG CAATGGAGAC TTGAAAGATA CTATAGCTTC AGTGGATCCA 
GAGCATCATG AGGAAACTCC TGAACTGACA GCTACTTCAG CTGTCCCACA TACAGCCCTG 
GAAGAATCAA CGGTGGTAGC GGAAACCGGA AGCTTAAATT CTTTAGATAA GTTTGTGAAT 
GAGAAAAATG AAGACATTCA GGCAGATACT GCTAATTTGA GAGCAGAGGA TAACAAGGAT 
TCTGAACCAG AGCATGCTGC TGAAAAAGGT AATGATGCTG GCCAGAACAA TATTGTGTCT 
GGGCACCCTG AAAGGATTGC AGAAACATAT CCAGAGAAGC AAAACACTCC AGTAAATAAA 
GAAGCTGGCC TTGGGCGTGC TGCCCCACTC CTGGAACCTG CAACTAGGGC AATGCAGCAG 
TTGCGTGCTA ATGGAGCCAT GTCTCATATG CGCCCTCAAC AGCTTGATGA CCCTACTAAT 
GGGGAGTCAG AGGAGCACGA TGAGACTCAT GAAAAACTCA AGATGATTAG GGTGAAATTT 
TTGCGGCTAG TGCATAGGCT TGGATTGGCT CCCAATGAAA CTGTTGTGGC ACAGGTTTTA 
TACAGATTGG GAATCGTTGA GCAGCTGCGA GGGAGAAATC GGGGTCGCAT TGGCACCTTA 
AGTTTTGATC CTGCAAGTGC CATGGCAGGA CAGCTTGAGG CAGATGGGCA GGAACCCCTT 
GATTTCTCCT GCACAATTAT GGTTCTTGGA AAGACTGGGG TTGGAAAAAG TGCCACTATC 
AATTCAATAT TTGATGAAGC AAAGCTCCCC ACCAATGCTT TTCAATCTGG TACAAAAATG 
GTTCAGGATG TTGTGGGAAC TGTTCAGGGG ATCAAGTTAC GGGTCATTGA CACACCAGGC 
CTCCTTCCTT CCGGGTCTGA CCAGCGACAG AATGAGAAAA TCCTTCTCTC AGTGAAAAAC 
TTTATCAAGA AAACTCCTCC AGATATTGTG TTGTATTTTG ATAGGTTGGA CATGCAGAGC 
AAGGATTTTG GTGATCTGCC CCTGTTGCGA ACCGTCACCA AGATATTCGG TCCATCTATA 
TGGCAAAATG CAATTGTTGT CCTCAGTCAT GCTGCTTCTG CTCCACCTGA TAGTCCACAA 
GGTACCGTTT CAAGTTATGA AATGTTTGTA ACTCAACGTT CTCATGTTGT TCAACAAACA 
ATTCGTCAGG CAGCAGGTGA TATGTGGCTT GTAAATCCCG TTTCATTAGT TGAGAATCAC 
TCTGCGTGTA GAAGAAATAG GGCAGGGCAT AGAGTGTTGC CTAATGGTCA GGTTTGGAAG 
CCTCAATTGT TGCTACTTTC CTTTGCATCA AAAATCCTCG CTGAAGCAAA CGCTATATTG 
AAGGTGCAAG ATGGTCCACC TAGGAAGCAA TTTGCAACTC GGTCAAGAGC TCCTCCTTTA 
CCATACCTGC TGTCATCTCT TCTCCGGTCA AGACCACAAG TTAAGCTACC TGAGGAACAG 
TTTGGTGATG AGGATGGTTT AGATGATGAT TTGGACGAGT CATTGGATTC TGAGGATGAG 
TCTGAATATG ATGATTTACC ACCATTTAAA AGTTTAACAA AAGCCCAGGT GGCAAAGCTT 
ACTAAAGCTC AGAAGAATGC ATATTTTGAT GAGTTAGAGT ACAGGGAGAA ACTTTTTATG 
AAGAAACAGT TGAAGGAAGA GAAAAGGCAA CAAAGGATGA TGAAGAAAAC TGCAGTGGCA 
ACCAATCCTC TGCCTGGTGA CTACAGTGAA AATGCAGAAG AAGAAAGTGA AGGGCCTGCA 
TCTGTGCCCG TTCCCATGCC AGATTTATCC TTACCTGCTT CTTTTGACTC TGATAATCCT 
TCCCACCGGT ACCGTTATCT TGATAACTCC AATCAGTGGC TTGTAAGGCC AGTTCTTGAT 
ACACATGGTT GGGATCATGA TGTTGGCTAT GAAGGTATAA ATGTGGAGAG ATTATTTGTA 
GTTAAAGACA AGATTCCTGT ATCCTTTTCT GGCCAGGTAA CGAAGGACAA GAAGGATGCC 
AATGTTCAAA TGGAATTAGC AAGTTCTATA AAGCATGGGG AAGGGAAATC AACTTCACTA 
GGTTTTGATA TGCAGACTTT AGGGAAGGAC TTGGGCTATA CTTTACACAG TGAGACAAGG 
TTCATTAATT TCAGGAAGAA CAAGGCAACT GCTGGTCTTT CGGTTACTCT ATTGGGTGAT 
GCCTTATCAG CTGGAGTGAA AGTTGAGGAC AAGTTGATTG CTAATAAGCG GTTCCAAATG 
GTCATGTCTG GTGGTGCAAT GACTGGTCGT GGTGATGTAG CATATGGTGG TAGTCTGGAG 
GCCCAACTGA GAGATGAAGA TTATCCCCTG GGTCGTTCGC TATCCACTCT TGGACTCTCT 
GTTGTAGATT GGCATGGAGT TCTAGCAATT GGTTGCAATA TACAATCTCA GGTTCCTATT 
GGAAGGTCTA CAAACTTGAT TGCCCGTGCC AATTTGAATA ACAAGGGTGC AGGACAACTC 
AGTATTCGCA TAAATAGTTC AGAACACCTC CAAATAGCTT TGGCAGGTCT CATTCCTCTA 
TTGAGGAAGC TTTTTGATTA TCATGAAGAA ATGCAGCTTG GACAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002312975.2
CDS	196..3603
Translation	MENGIDRVVDATQLENNINVNTEVSRDKVEDKYEVLGGAVEGTNELLGDKVEEKVAVASSESKDLEDEVFVEALESTEKLHEEGVKFESDGGVESVGDSSLVVGNANLDVGNEMEKFEAHESEGGDSGSVVVIEKSDVGSMMDKFEEPVFVPAEPGNPEGLTEVVGEEKVVDSVGGESVRKIDEGGTVVEVEGSVLNGGEVVSVELQDRKGEGLHENPVKVDTEDQDDKSGELIGDSAGLDSEDGIHKGGHPKGISATVDTEHGDTSNGDLKDTIASVDPEHHEETPELTATSAVPHTALEESTVVAETGSLNSLDKFVNEKNEDIQADTANLRAEDNKDSEPEHAAEKGNDAGQNNIVSGHPERIAETYPEKQNTPVNKEAGLGRAAPLLEPATRAMQQLRANGAMSHMRPQQLDDPTNGESEEHDETHEKLKMIRVKFLRLVHRLGLAPNETVVAQVLYRLGIVEQLRGRNRGRIGTLSFDPASAMAGQLEADGQEPLDFSCTIMVLGKTGVGKSATINSIFDEAKLPTNAFQSGTKMVQDVVGTVQGIKLRVIDTPGLLPSGSDQRQNEKILLSVKNFIKKTPPDIVLYFDRLDMQSKDFGDLPLLRTVTKIFGPSIWQNAIVVLSHAASAPPDSPQGTVSSYEMFVTQRSHVVQQTIRQAAGDMWLVNPVSLVENHSACRRNRAGHRVLPNGQVWKPQLLLLSFASKILAEANAILKVQDGPPRKQFATRSRAPPLPYLLSSLLRSRPQVKLPEEQFGDEDGLDDDLDESLDSEDESEYDDLPPFKSLTKAQVAKLTKAQKNAYFDELEYREKLFMKKQLKEEKRQQRMMKKTAVATNPLPGDYSENAEEESEGPASVPVPMPDLSLPASFDSDNPSHRYRYLDNSNQWLVRPVLDTHGWDHDVGYEGINVERLFVVKDKIPVSFSGQVTKDKKDANVQMELASSIKHGEGKSTSLGFDMQTLGKDLGYTLHSETRFINFRKNKATAGLSVTLLGDALSAGVKVEDKLIANKRFQMVMSGGAMTGRGDVAYGGSLEAQLRDEDYPLGRSLSTLGLSVVDWHGVLAIGCNIQSQVPIGRSTNLIARANLNNKGAGQLSIRINSSEHLQIALAGLIPLLRKLFDYHEEMQLGQ

Target ORF information:

RefSeq Version	XM_002312939.2
Organism	Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
Definition	Populus trichocarpa hypothetical protein (POPTR_0009s13380g) mRNA, complete cds.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002312939.2

ORF Insert Sequence:

ATGGAAAATG GAATTGATAG AGTTGTCGAT GCGACGCAAT TAGAAAACAA CATCAATGTT 
AACACTGAAG TTTCTAGGGA TAAGGTGGAG GATAAATATG AGGTTTTGGG TGGCGCGGTG 
GAGGGAACAA ATGAGTTGTT GGGGGATAAG GTAGAGGAGA AGGTTGCGGT GGCGTCCAGT 
GAATCGAAGG ATTTGGAAGA TGAGGTTTTT GTGGAGGCAC TTGAGTCAAC CGAGAAATTG 
CATGAAGAGG GAGTGAAGTT TGAGTCAGAT GGTGGTGTTG AGAGTGTTGG TGACTCGAGT 
TTGGTGGTTG GGAATGCAAA TTTGGATGTG GGAAATGAAA TGGAGAAATT TGAGGCACAT 
GAGTCAGAAG GTGGTGATTC TGGTTCAGTA GTTGTCATTG AGAAATCAGA TGTAGGAAGT 
ATGATGGACA AATTTGAAGA GCCGGTTTTT GTTCCTGCTG AGCCTGGGAA TCCCGAGGGG 
TTGACTGAGG TGGTTGGTGA AGAGAAGGTG GTGGATTCGG TAGGTGGAGA GAGTGTCCGT 
AAGATTGACG AGGGAGGGAC TGTTGTGGAA GTGGAGGGCA GTGTGTTGAA TGGAGGGGAG 
GTTGTTTCAG TTGAGCTTCA AGACAGAAAA GGTGAAGGAC TTCATGAGAA TCCGGTGAAA 
GTTGATACAG AAGACCAGGA TGACAAAAGT GGGGAATTGA TAGGGGATTC AGCTGGCCTT 
GATTCGGAGG ATGGGATTCA CAAGGGTGGG CATCCAAAGG GCATTTCAGC AACTGTTGAT 
ACAGAACACG GAGATACCAG CAATGGAGAC TTGAAAGATA CTATAGCTTC AGTGGATCCA 
GAGCATCATG AGGAAACTCC TGAACTGACA GCTACTTCAG CTGTCCCACA TACAGCCCTG 
GAAGAATCAA CGGTGGTAGC GGAAACCGGA AGCTTAAATT CTTTAGATAA GTTTGTGAAT 
GAGAAAAATG AAGACATTCA GGCAGATACT GCTAATTTGA GAGCAGAGGA TAACAAGGAT 
TCTGAACCAG AGCATGCTGC TGAAAAAGGT AATGATGCTG GCCAGAACAA TATTGTGTCT 
GGGCACCCTG AAAGGATTGC AGAAACATAT CCAGAGAAGC AAAACACTCC AGTAAATAAA 
GAAGCTGGCC TTGGGCGTGC TGCCCCACTC CTGGAACCTG CAACTAGGGC AATGCAGCAG 
TTGCGTGCTA ATGGAGCCAT GTCTCATATG CGCCCTCAAC AGCTTGATGA CCCTACTAAT 
GGGGAGTCAG AGGAGCACGA TGAGACTCAT GAAAAACTCA AGATGATTAG GGTGAAATTT 
TTGCGGCTAG TGCATAGGCT TGGATTGGCT CCCAATGAAA CTGTTGTGGC ACAGGTTTTA 
TACAGATTGG GAATCGTTGA GCAGCTGCGA GGGAGAAATC GGGGTCGCAT TGGCACCTTA 
AGTTTTGATC CTGCAAGTGC CATGGCAGGA CAGCTTGAGG CAGATGGGCA GGAACCCCTT 
GATTTCTCCT GCACAATTAT GGTTCTTGGA AAGACTGGGG TTGGAAAAAG TGCCACTATC 
AATTCAATAT TTGATGAAGC AAAGCTCCCC ACCAATGCTT TTCAATCTGG TACAAAAATG 
GTTCAGGATG TTGTGGGAAC TGTTCAGGGG ATCAAGTTAC GGGTCATTGA CACACCAGGC 
CTCCTTCCTT CCGGGTCTGA CCAGCGACAG AATGAGAAAA TCCTTCTCTC AGTGAAAAAC 
TTTATCAAGA AAACTCCTCC AGATATTGTG TTGTATTTTG ATAGGTTGGA CATGCAGAGC 
AAGGATTTTG GTGATCTGCC CCTGTTGCGA ACCGTCACCA AGATATTCGG TCCATCTATA 
TGGCAAAATG CAATTGTTGT CCTCAGTCAT GCTGCTTCTG CTCCACCTGA TAGTCCACAA 
GGTACCGTTT CAAGTTATGA AATGTTTGTA ACTCAACGTT CTCATGTTGT TCAACAAACA 
ATTCGTCAGG CAGCAGGTGA TATGTGGCTT GTAAATCCCG TTTCATTAGT TGAGAATCAC 
TCTGCGTGTA GAAGAAATAG GGCAGGGCAT AGAGTGTTGC CTAATGGTCA GGTTTGGAAG 
CCTCAATTGT TGCTACTTTC CTTTGCATCA AAAATCCTCG CTGAAGCAAA CGCTATATTG 
AAGGTGCAAG ATGGTCCACC TAGGAAGCAA TTTGCAACTC GGTCAAGAGC TCCTCCTTTA 
CCATACCTGC TGTCATCTCT TCTCCGGTCA AGACCACAAG TTAAGCTACC TGAGGAACAG 
TTTGGTGATG AGGATGGTTT AGATGATGAT TTGGACGAGT CATTGGATTC TGAGGATGAG 
TCTGAATATG ATGATTTACC ACCATTTAAA AGTTTAACAA AAGCCCAGGT GGCAAAGCTT 
ACTAAAGCTC AGAAGAATGC ATATTTTGAT GAGTTAGAGT ACAGGGAGAA ACTTTTTATG 
AAGAAACAGT TGAAGGAAGA GAAAAGGCAA CAAAGGATGA TGAAGAAAAC TGCAGTGGCA 
ACCAATCCTC TGCCTGGTGA CTACAGTGAA AATGCAGAAG AAGAAAGTGA AGGGCCTGCA 
TCTGTGCCCG TTCCCATGCC AGATTTATCC TTACCTGCTT CTTTTGACTC TGATAATCCT 
TCCCACCGGT ACCGTTATCT TGATAACTCC AATCAGTGGC TTGTAAGGCC AGTTCTTGAT 
ACACATGGTT GGGATCATGA TGTTGGCTAT GAAGGTATAA ATGTGGAGAG ATTATTTGTA 
GTTAAAGACA AGATTCCTGT ATCCTTTTCT GGCCAGGTAA CGAAGGACAA GAAGGATGCC 
AATGTTCAAA TGGAATTAGC AAGTTCTATA AAGCATGGGG AAGGGAAATC AACTTCACTA 
GGTTTTGATA TGCAGACTTT AGGGAAGGAC TTGGGCTATA CTTTACACAG TGAGACAAGG 
TTCATTAATT TCAGGAAGAA CAAGGCAACT GCTGGTCTTT CGGTTACTCT ATTGGGTGAT 
GCCTTATCAG CTGGAGTGAA AGTTGAGGAC AAGTTGATTG CTAATAAGCG GTTCCAAATG 
GTCATGTCTG GTGGTGCAAT GACTGGTCGT GGTGATGTAG CATATGGTGG TAGTCTGGAG 
GCCCAACTGA GAGATGAAGA TTATCCCCTG GGTCGTTCGC TATCCACTCT TGGACTCTCT 
GTTGTAGATT GGCATGGAGT TCTAGCAATT GGTTGCAATA TACAATCTCA GGTTCCTATT 
GGAAGGTCTA CAAACTTGAT TGCCCGTGCC AATTTGAATA ACAAGGGTGC AGGACAACTC 
AGTATTCGCA TAAATAGTTC AGAACACCTC CAAATAGCTT TGGCAGGTCT CATTCCTCTA 
TTGAGGAAGC TTTTTGATTA TCATGAAGAA ATGCAGCTTG GACAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D

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LOC7494262 cDNA ORF clone, Populus trichocarpa(black cottonwood)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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