ORF » Species Summary » Populus trichocarpa » POPTR_0003s22320g cDNA ORF clone

POPTR_0003s22320g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0003s22320g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0003s22320g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa08478 XM_002303844.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0003s22320g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
OPa419320 XM_024592707.1
Latest version!		 Populus trichocarpa putative UPF0481 protein At3g02645 (LOC7493258), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0003s22320g ( XM_002303844.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002303880.2 Populus trichocarpa hypothetical protein (POPTR_0003s22320g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa08478
    Clone ID Related Accession (Same CDS sequence) XM_002303844.2
    Accession Version XM_002303844.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1221bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008469). On Dec 16, 2013 this sequence version replaced XM_002303844.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGAGGATG TAGGAACATC GGTTGATGAT CAGCAGGTAA CAAAATATGA TCAGGATTCA 
    CAACTTTCAC TTGATATTAA CAGGTTAGCG AAGTCCTTGA GAGCGGATAT GGAAATGTTG 
    CATACTTTCT CCGATCAATG TTGTATGACT ACAGAGTCCC TATTCGACTA CGTGCGTGAG 
    TCGAATGAAA AGATCTTCAC ACCTCAAGTA GTAAACCTTG GTCCACTTCA CCATGGAAAA 
    GAAGAGCTTA AAGCAATGCA GGAGCACAAA ATATTGTACT TGCAAGATTT TCTTGAATGG 
    AGCGAGGCAA GCATGGAGGA GTTAATTAAA GTTGTAGAGG AGAGAGAGAC AAGATTGCGT 
    AATTGTTACG CAGAAACCAT CGATCTTGGT AGTGAAGACT TTGTGAAAAT GATGTTACTA 
    GATGCCTCCT TCATCATTGT GCTCCCATTC TTCATTCTTG AGGATTTGCT TAAAGCATCC 
    AGCATAACCA GATATAGCCC TGCTGAAGAG GAATATTCAG TGATTAAGCT TACATACAAG 
    TTCTTCGAAG AGAGACGAGA TTCTTTGATG AAAACGGGAA TTGTGGAGGA AATCAATTCG 
    TCTGAAGTAG CACATTTTGT TGACTTCATA ATAAAATGTC AGAAGCCATC AGAGTCAGAT 
    AAAACGGAGA AAGAACTCGA GACCATAAAC GTACCAAGTA TAACTGAACT CCATCAAGCT 
    GGAGTTAAGT TCAGGTTTAA ACCGGGCAAA AGTTTGATCG AAATGAAATT CGATAGAGGG 
    ATCCTGGAAA TTACACTATT GAAAATAGAT GACGACACAG AAATCTTATT CAGGAATCTC 
    CAGGCATTTG AGCAATGCCA TTGCGTCGAA GATTATATAG CTAACTATAT TTCAACAATC 
    AATTTCCTTG TCGTTACTCC TAAGGATGTG GAAATCCTTG ATCGAAATGG AATTATAGAA 
    AACTGGATAC ATGACTATGA AGCAGTTACG ACTCTTCTTC ATAATATTTC CAAGGAAAAT 
    GCACTCTCCG CGGATGATTT CATCTTCGCT AGTCTCGTTG AAGATCTGAA TGCATACTGC 
    AGGAGGCCTT GGAATAAATG GAAGGCAACC TTGAAACAAG AGTATTTCCA TACTCCATGG 
    GCCATAATCT CTCTTATTGC AGCCGCGATT CTCCTCATAC TCACTACGGT ACAAACCGTG 
    TGTTCTCTTA TTCAAGTGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002303880.2
    CDS1..1221
    Translation

    Target ORF information:

    RefSeq Version XM_002303844.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0003s22320g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002303844.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGAGGATG TAGGAACATC GGTTGATGAT CAGCAGGTAA CAAAATATGA TCAGGATTCA 
    CAACTTTCAC TTGATATTAA CAGGTTAGCG AAGTCCTTGA GAGCGGATAT GGAAATGTTG 
    CATACTTTCT CCGATCAATG TTGTATGACT ACAGAGTCCC TATTCGACTA CGTGCGTGAG 
    TCGAATGAAA AGATCTTCAC ACCTCAAGTA GTAAACCTTG GTCCACTTCA CCATGGAAAA 
    GAAGAGCTTA AAGCAATGCA GGAGCACAAA ATATTGTACT TGCAAGATTT TCTTGAATGG 
    AGCGAGGCAA GCATGGAGGA GTTAATTAAA GTTGTAGAGG AGAGAGAGAC AAGATTGCGT 
    AATTGTTACG CAGAAACCAT CGATCTTGGT AGTGAAGACT TTGTGAAAAT GATGTTACTA 
    GATGCCTCCT TCATCATTGT GCTCCCATTC TTCATTCTTG AGGATTTGCT TAAAGCATCC 
    AGCATAACCA GATATAGCCC TGCTGAAGAG GAATATTCAG TGATTAAGCT TACATACAAG 
    TTCTTCGAAG AGAGACGAGA TTCTTTGATG AAAACGGGAA TTGTGGAGGA AATCAATTCG 
    TCTGAAGTAG CACATTTTGT TGACTTCATA ATAAAATGTC AGAAGCCATC AGAGTCAGAT 
    AAAACGGAGA AAGAACTCGA GACCATAAAC GTACCAAGTA TAACTGAACT CCATCAAGCT 
    GGAGTTAAGT TCAGGTTTAA ACCGGGCAAA AGTTTGATCG AAATGAAATT CGATAGAGGG 
    ATCCTGGAAA TTACACTATT GAAAATAGAT GACGACACAG AAATCTTATT CAGGAATCTC 
    CAGGCATTTG AGCAATGCCA TTGCGTCGAA GATTATATAG CTAACTATAT TTCAACAATC 
    AATTTCCTTG TCGTTACTCC TAAGGATGTG GAAATCCTTG ATCGAAATGG AATTATAGAA 
    AACTGGATAC ATGACTATGA AGCAGTTACG ACTCTTCTTC ATAATATTTC CAAGGAAAAT 
    GCACTCTCCG CGGATGATTT CATCTTCGCT AGTCTCGTTG AAGATCTGAA TGCATACTGC 
    AGGAGGCCTT GGAATAAATG GAAGGCAACC TTGAAACAAG AGTATTTCCA TACTCCATGG 
    GCCATAATCT CTCTTATTGC AGCCGCGATT CTCCTCATAC TCACTACGGT ACAAACCGTG 
    TGTTCTCTTA TTCAAGTGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0003s22320g ( XM_024592707.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024448475.1 Populus trichocarpa putative UPF0481 protein At3g02645 (LOC7493258), mRNA.
    Price & Availability↑
    CloneID OPa419320
    Clone ID Related Accession (Same CDS sequence) XM_024592707.1
    Accession Version XM_024592707.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1101bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product putative UPF0481 protein At3g02645
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020167930.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGAGGATG TAGGAACATC GGTTGATGAT CAGCAGTCCC TATTCGACTA CGTACGTGAG 
    TCGAATGAAA AGATCTTGAC ACCTCAAGTA GTAAACCTTG GTCCACTTCA CCATGGAAAA 
    GAAGAGCTTA AAGCAATGCA GGAGCACAAA ATATTGTACT TGAAAGATTT TCTTGAATGG 
    AGCGAGGCAA GCATGGAGGA GTTAATTAAA GTTGTAGAGG AGAGAGAGAC AAGATTGCGT 
    AATTGTTACG CAGAAACCAT CGATCTTGGT AGTGAAGACT TTGTGAAAAT GATGTTACTA 
    GATGCCTCCT TCATCATTGT GCTCCCATTC TTCATTCTTG AGGATTTGCT TAAAGCATCC 
    AGCATAACCA GATATAGCCC TGCTGAAGAG GAATATTCAG TGATTAAGCT TACATACAAG 
    TTCTTCGAAG AGAGACGAGA TTCTTTGATG AAAACGGGAA TTGTGGAGGA AATCAATTCG 
    TCTGAAGTAG CACATTTTGT TGACTTCATA ATAAAATGTC AGAAGCCATC AGAGTCAGAT 
    AAAACGGAGA AAGAACTCGA GACCATAAAC GTACCAAGTA TAACTGAACT CCATCAAGCT 
    GGAGTTAAGT TCAGGTTTAA ACCGGGCAAA AGTTTGATCG ACATGAAATT CGATAGAGGG 
    ATCCTGGAAA TGCCACTATT GAAAATAGAT GACGACACAG AAATCTTATT CAGGAATCTC 
    CAGGCATTTG AGCAATGCCA TTGCGTCGAA GATTATATAG CTAACTATAT TTCAACAATC 
    AATTTCCTTG TCGTTACTCC TAAGGATGTG GAAATCCTTG ATCGAAATGG AATTATAGAA 
    AACTGGATAC ATGACTATGA AGCAGTTACG ACTCTTCTTC ATAATATTTC CAAGGAAAAT 
    GCACTCTCCG CGGATGATTT CATCTTCGCT AGTCTCGTTG AAGATCTGAA TGCATACTGC 
    AGGAGGCCTT GGAATAAATG GAAGGCAACC TTGAAACAAG AGTATTTCCA TACTCCATGG 
    GCCATAATCT CTCTTATTGC AGCCGCGATT CTCCTCATAC TCACTACGGT ACAAACCGTG 
    TGTTCTCTTA TTCAAGTGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024448475.1
    CDS1..1101
    Translation

    Target ORF information:

    RefSeq Version XM_024592707.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa putative UPF0481 protein At3g02645 (LOC7493258), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024592707.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGAGGATG TAGGAACATC GGTTGATGAT CAGCAGTCCC TATTCGACTA CGTACGTGAG 
    TCGAATGAAA AGATCTTGAC ACCTCAAGTA GTAAACCTTG GTCCACTTCA CCATGGAAAA 
    GAAGAGCTTA AAGCAATGCA GGAGCACAAA ATATTGTACT TGAAAGATTT TCTTGAATGG 
    AGCGAGGCAA GCATGGAGGA GTTAATTAAA GTTGTAGAGG AGAGAGAGAC AAGATTGCGT 
    AATTGTTACG CAGAAACCAT CGATCTTGGT AGTGAAGACT TTGTGAAAAT GATGTTACTA 
    GATGCCTCCT TCATCATTGT GCTCCCATTC TTCATTCTTG AGGATTTGCT TAAAGCATCC 
    AGCATAACCA GATATAGCCC TGCTGAAGAG GAATATTCAG TGATTAAGCT TACATACAAG 
    TTCTTCGAAG AGAGACGAGA TTCTTTGATG AAAACGGGAA TTGTGGAGGA AATCAATTCG 
    TCTGAAGTAG CACATTTTGT TGACTTCATA ATAAAATGTC AGAAGCCATC AGAGTCAGAT 
    AAAACGGAGA AAGAACTCGA GACCATAAAC GTACCAAGTA TAACTGAACT CCATCAAGCT 
    GGAGTTAAGT TCAGGTTTAA ACCGGGCAAA AGTTTGATCG ACATGAAATT CGATAGAGGG 
    ATCCTGGAAA TGCCACTATT GAAAATAGAT GACGACACAG AAATCTTATT CAGGAATCTC 
    CAGGCATTTG AGCAATGCCA TTGCGTCGAA GATTATATAG CTAACTATAT TTCAACAATC 
    AATTTCCTTG TCGTTACTCC TAAGGATGTG GAAATCCTTG ATCGAAATGG AATTATAGAA 
    AACTGGATAC ATGACTATGA AGCAGTTACG ACTCTTCTTC ATAATATTTC CAAGGAAAAT 
    GCACTCTCCG CGGATGATTT CATCTTCGCT AGTCTCGTTG AAGATCTGAA TGCATACTGC 
    AGGAGGCCTT GGAATAAATG GAAGGCAACC TTGAAACAAG AGTATTTCCA TACTCCATGG 
    GCCATAATCT CTCTTATTGC AGCCGCGATT CTCCTCATAC TCACTACGGT ACAAACCGTG 
    TGTTCTCTTA TTCAAGTGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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