ORF » Species Summary » Populus trichocarpa » POPTR_0001s37960g cDNA ORF clone

POPTR_0001s37960g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s37960g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s37960g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa01847 XM_002298845.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0001s37960g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
OPa423291 XM_024593831.1
Latest version!		 Populus trichocarpa coiled-coil domain-containing protein 22 (LOC7485128), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s37960g ( XM_002298845.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002298881.2 Populus trichocarpa hypothetical protein (POPTR_0001s37960g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa01847
    Clone ID Related Accession (Same CDS sequence) XM_002298845.2
    Accession Version XM_002298845.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1560bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002298845.1. COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGATGGAAG AATCAGAATC TCGTAAGCAG ACACTGTTAA GTTCACTCGA AAGCGCCGGC 
    ATTTGGATCC CGGACAACGT TACATCGATC GGAGACTTGA GTCCGGAAAC CTTCGTCTCC 
    ATCTGCGCTC AGTGTGTTAA TTTGATAGAT CAAACGGCTT CGTTGCCTAC AACTCTGCCG 
    GATGCGGCGA TTGACAAGCT GAAGATGTGT GCGGACATGG GTTTAGCTAT AAAGCGACTT 
    GGTTTTATTG GAGACATGAG CTATATTAAG GTAATCAAAC CCGTCACTAA TTGTTTTGTA 
    ATTAAGCTCC TCTATCCTTC TGAAGATGAC CTCCATAAGT TGACTAGATT CTTGGTGGAG 
    AGGCTTACTG AGTCGACTCG ACCTGTCAAA ATAGCTGAGG TGAAGGATGT GAATGCTAGA 
    GGGAAAACCA AGGAGGATGG CTCTGATATT GGTGGAAGGT TAGATCTTAA TCATCAGAGA 
    GAAAAATTGG CAGATCCTAG TCTCCATAAT GCAGTGCCAG AGGCTGAAGA CATACCCTTT 
    ATTGGCTTGA GCAGACAAAA TCTCGGCAAG GACAAGTTAC CTGCTTTTTT TTATGGAGAA 
    CTTTTTGATG AAGAAGGAAA GTCAGGAAGA GATCTGTTTG GAAATGAAGA AACAGCTGCC 
    GCGGGAGATG ATAAGGATGT TCAGAAAGCG ATTTCTATTA AAGAGCAGCC ATCCATGGTA 
    ATAATTGAGA AAGAAGAATT AAGAAATGAA GAAAAAGTGC TCACAGAGGA GGTTACTGCA 
    AAGACATCAG AATTACAGCA TCTTGAGGAA GAACTTGAAT TGTTAAAGGC AGCAGCAGAA 
    ATGGCATTTG GTGATCAGAA TTCTATTGAC TTCTGCTTTG AGCAGCTTAA AGGGCAAGTG 
    GATGCCAAAA GGTGCAATAT TACAGAATTG AAGTCACAGT GGGATGCTTT CAGAATGCCT 
    CTGGAAGACA AGAAGAGAAA CCTAGAGGAG TCCCTGTATG CAAACATACC AGGTTCTCAA 
    GAAAAGCTCC AAAAGTTGAG GGAACTTGAG CACGAAAAAC AGTTGGTGTT GTCTGAAATT 
    ACAAAGAGGG AGGAGGAACA TTCTAAACTT TCTGCAGATC TTGAGAAGCA GCCTAAACTT 
    CCATCTAGAA CATCCTATAT TGAGCGGATA AAGGAGATTA CAAAAAGTAG TCAGAAACAG 
    GATGCTGATA TAAAGAGGAT CTTAAAAGAA ACTAGGGAGC TTCAGTTGGA GAGTAACTCT 
    ATCCAAGATC GCCTTCATCG AACATATGCT GTTCTAGATG AAATAGTGTG TAGGGAAGCA 
    AAGAGAGACC TGGTAGGACG GAAGGCTTAT AGGCTCCTCA CTAGCTTACA CGACTGCTTC 
    GGTCAGATTT CTGAGAAAAT CCTTACCACT GATAGAATAA GCAGAGAAAT GACTGAACTT 
    GAAAAGAAGC TAGCAGCCAT GGCGTCCCGA AGTTTAAACG TGGATAAGCT GCAAGCAGAC 
    CTTGATGCCA TTGTGAAGGA AAATGAGTGC CTGGAGCTAC GCCTTGCAGA AAACCCATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002298881.2
    CDS69..1628
    Translation

    Target ORF information:

    RefSeq Version XM_002298845.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s37960g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002298845.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGATGGAAG AATCAGAATC TCGTAAGCAG ACACTGTTAA GTTCACTCGA AAGCGCCGGC 
    ATTTGGATCC CGGACAACGT TACATCGATC GGAGACTTGA GTCCGGAAAC CTTCGTCTCC 
    ATCTGCGCTC AGTGTGTTAA TTTGATAGAT CAAACGGCTT CGTTGCCTAC AACTCTGCCG 
    GATGCGGCGA TTGACAAGCT GAAGATGTGT GCGGACATGG GTTTAGCTAT AAAGCGACTT 
    GGTTTTATTG GAGACATGAG CTATATTAAG GTAATCAAAC CCGTCACTAA TTGTTTTGTA 
    ATTAAGCTCC TCTATCCTTC TGAAGATGAC CTCCATAAGT TGACTAGATT CTTGGTGGAG 
    AGGCTTACTG AGTCGACTCG ACCTGTCAAA ATAGCTGAGG TGAAGGATGT GAATGCTAGA 
    GGGAAAACCA AGGAGGATGG CTCTGATATT GGTGGAAGGT TAGATCTTAA TCATCAGAGA 
    GAAAAATTGG CAGATCCTAG TCTCCATAAT GCAGTGCCAG AGGCTGAAGA CATACCCTTT 
    ATTGGCTTGA GCAGACAAAA TCTCGGCAAG GACAAGTTAC CTGCTTTTTT TTATGGAGAA 
    CTTTTTGATG AAGAAGGAAA GTCAGGAAGA GATCTGTTTG GAAATGAAGA AACAGCTGCC 
    GCGGGAGATG ATAAGGATGT TCAGAAAGCG ATTTCTATTA AAGAGCAGCC ATCCATGGTA 
    ATAATTGAGA AAGAAGAATT AAGAAATGAA GAAAAAGTGC TCACAGAGGA GGTTACTGCA 
    AAGACATCAG AATTACAGCA TCTTGAGGAA GAACTTGAAT TGTTAAAGGC AGCAGCAGAA 
    ATGGCATTTG GTGATCAGAA TTCTATTGAC TTCTGCTTTG AGCAGCTTAA AGGGCAAGTG 
    GATGCCAAAA GGTGCAATAT TACAGAATTG AAGTCACAGT GGGATGCTTT CAGAATGCCT 
    CTGGAAGACA AGAAGAGAAA CCTAGAGGAG TCCCTGTATG CAAACATACC AGGTTCTCAA 
    GAAAAGCTCC AAAAGTTGAG GGAACTTGAG CACGAAAAAC AGTTGGTGTT GTCTGAAATT 
    ACAAAGAGGG AGGAGGAACA TTCTAAACTT TCTGCAGATC TTGAGAAGCA GCCTAAACTT 
    CCATCTAGAA CATCCTATAT TGAGCGGATA AAGGAGATTA CAAAAAGTAG TCAGAAACAG 
    GATGCTGATA TAAAGAGGAT CTTAAAAGAA ACTAGGGAGC TTCAGTTGGA GAGTAACTCT 
    ATCCAAGATC GCCTTCATCG AACATATGCT GTTCTAGATG AAATAGTGTG TAGGGAAGCA 
    AAGAGAGACC TGGTAGGACG GAAGGCTTAT AGGCTCCTCA CTAGCTTACA CGACTGCTTC 
    GGTCAGATTT CTGAGAAAAT CCTTACCACT GATAGAATAA GCAGAGAAAT GACTGAACTT 
    GAAAAGAAGC TAGCAGCCAT GGCGTCCCGA AGTTTAAACG TGGATAAGCT GCAAGCAGAC 
    CTTGATGCCA TTGTGAAGGA AAATGAGTGC CTGGAGCTAC GCCTTGCAGA AAACCCATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s37960g ( XM_024593831.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024449599.1 Populus trichocarpa coiled-coil domain-containing protein 22 (LOC7485128), mRNA.
    Price & Availability↑
    CloneID OPa423291
    Clone ID Related Accession (Same CDS sequence) XM_024593831.1
    Accession Version XM_024593831.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1524bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product coiled-coil domain-containing protein 22
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGATGGAAG AATCAGAATC TCGTAAGCAG ACACTGTTAA GTTCACTCGA AAGCGCCGGC 
    ATTTGGATCC CGGACAACGT TACATCGATC GGAGACTTGA GTCCGGAAAC CTTCGTCTCC 
    ATCTGCGCTC AGTGTGTTAA TTTGATAGAT CAAACGGCTT CGTTGCCTAC AACTCTGCCG 
    GATGCGGCGA TTGACAAGCT GAAGATGTGT GCGGACATGG GTTTAGCTAT AAAGCGACTT 
    GGTTTTATTG GAGACATGAG CTATATTAAG CTCCTCTATC CTTCTGAAGA TGACCTCCAT 
    AAGTTGACTA GATTCTTGGT GGAGAGGCTT ACTGAGTCGA CTCGACCTGT CAAAATAGCT 
    GAGGTGAAGG ATGTGAATGC TAGAGGGAAA ACCAAGGAGG ATGGCTCTAA TATTGGTGGA 
    AGGTTAGATC TTAATCATCA GAGAGAAAAA TTGGAAGATC CTAGTCTCCA TAATGCAGTG 
    CCAGAGGCTG AAGACATACC CTTTATTGGC TTGAGCAGAC AAAATCTCGG CAAGGACAAG 
    TTACCTGCTT TTTTTTATGG AGAACTTTTT GATGAAGAAG GAAAGTCAGG AAGAGATCTG 
    TTTGGAAATG AAGAAACAGC TGCCGCGGGA GATGATAAGG ATGTTCAGAA AGCGATTTCT 
    ATTGAAGAGC AGCCATCCAT GGTAATAATT GAGAAAGAAG AATTAAGAAA TGAAGAAAAA 
    GTGCTCACAG AGGAGGTTAC TGCAAAGACA TCAGAATTAC AGCATCTTGA GGAAGAACTT 
    GAATTGTTAA AGGCAGCAGC AGAAATGGCA TTTGGTGATC AGAATTCTAT TGACTTCTGC 
    TTTGAGCAGC TTAAAGGGCA AGTGGATGCC AAAAGGTGCA ATATTACAGA ATTGAAGTCA 
    CAGTGGGATG CTTTCAGAAT GCCTCTGGAA GACAAGAAGA GAAACCTAGA GGAGTCCCTG 
    TATGCAAACA TACCAGGTTC TCAAGAAAAG CTCCAAAAGT TGAGGGAACT TGAGCACGAA 
    AAACAGTTGG TGTTGTCTGA AATTACAAAG AGGGAGGAGG AACATTCTAA ACTTTCTGCA 
    GATCTTGAGA AGCAGCCTAA ACTTCCATCT AGAACATCCT ATATTGAGCG GATAAAGGAG 
    ATTACAAAAA GTAGTCAGAA ACAGGATGCT GATATAAAGA GGATCTTAAA AGAAACTAGG 
    GAGCTTCAGT TGGAGAGTAA CTCTATCCAA GATCGCCTTC ATCGAACATA TGCTGTTCTA 
    GATGAAATAG TGTGTAGGGA AGCAAAGAGA GACCTGGTAG GACGGAAGGC TTATAGGCTC 
    CTCACTAGCT TACACGACTG CTTCGGTCAG ATTTCTGAGA AAATCCTTAC CACTGATAGA 
    ATAAGCAGAG AAATGACTGA ACTTGAAAAG AAGCTAGCAG CCATGGCGTC CCGAAGTTTA 
    AACGTGGATA AGCTGCAAGC AGACCTTGAT GCCATTGTGA AGGAAAATGA GTGCCTGGAG 
    CTACGCCTTG CAGAAAACCC ATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024449599.1
    CDS104..1627
    Translation

    Target ORF information:

    RefSeq Version XM_024593831.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa coiled-coil domain-containing protein 22 (LOC7485128), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024593831.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGATGGAAG AATCAGAATC TCGTAAGCAG ACACTGTTAA GTTCACTCGA AAGCGCCGGC 
    ATTTGGATCC CGGACAACGT TACATCGATC GGAGACTTGA GTCCGGAAAC CTTCGTCTCC 
    ATCTGCGCTC AGTGTGTTAA TTTGATAGAT CAAACGGCTT CGTTGCCTAC AACTCTGCCG 
    GATGCGGCGA TTGACAAGCT GAAGATGTGT GCGGACATGG GTTTAGCTAT AAAGCGACTT 
    GGTTTTATTG GAGACATGAG CTATATTAAG CTCCTCTATC CTTCTGAAGA TGACCTCCAT 
    AAGTTGACTA GATTCTTGGT GGAGAGGCTT ACTGAGTCGA CTCGACCTGT CAAAATAGCT 
    GAGGTGAAGG ATGTGAATGC TAGAGGGAAA ACCAAGGAGG ATGGCTCTAA TATTGGTGGA 
    AGGTTAGATC TTAATCATCA GAGAGAAAAA TTGGAAGATC CTAGTCTCCA TAATGCAGTG 
    CCAGAGGCTG AAGACATACC CTTTATTGGC TTGAGCAGAC AAAATCTCGG CAAGGACAAG 
    TTACCTGCTT TTTTTTATGG AGAACTTTTT GATGAAGAAG GAAAGTCAGG AAGAGATCTG 
    TTTGGAAATG AAGAAACAGC TGCCGCGGGA GATGATAAGG ATGTTCAGAA AGCGATTTCT 
    ATTGAAGAGC AGCCATCCAT GGTAATAATT GAGAAAGAAG AATTAAGAAA TGAAGAAAAA 
    GTGCTCACAG AGGAGGTTAC TGCAAAGACA TCAGAATTAC AGCATCTTGA GGAAGAACTT 
    GAATTGTTAA AGGCAGCAGC AGAAATGGCA TTTGGTGATC AGAATTCTAT TGACTTCTGC 
    TTTGAGCAGC TTAAAGGGCA AGTGGATGCC AAAAGGTGCA ATATTACAGA ATTGAAGTCA 
    CAGTGGGATG CTTTCAGAAT GCCTCTGGAA GACAAGAAGA GAAACCTAGA GGAGTCCCTG 
    TATGCAAACA TACCAGGTTC TCAAGAAAAG CTCCAAAAGT TGAGGGAACT TGAGCACGAA 
    AAACAGTTGG TGTTGTCTGA AATTACAAAG AGGGAGGAGG AACATTCTAA ACTTTCTGCA 
    GATCTTGAGA AGCAGCCTAA ACTTCCATCT AGAACATCCT ATATTGAGCG GATAAAGGAG 
    ATTACAAAAA GTAGTCAGAA ACAGGATGCT GATATAAAGA GGATCTTAAA AGAAACTAGG 
    GAGCTTCAGT TGGAGAGTAA CTCTATCCAA GATCGCCTTC ATCGAACATA TGCTGTTCTA 
    GATGAAATAG TGTGTAGGGA AGCAAAGAGA GACCTGGTAG GACGGAAGGC TTATAGGCTC 
    CTCACTAGCT TACACGACTG CTTCGGTCAG ATTTCTGAGA AAATCCTTAC CACTGATAGA 
    ATAAGCAGAG AAATGACTGA ACTTGAAAAG AAGCTAGCAG CCATGGCGTC CCGAAGTTTA 
    AACGTGGATA AGCTGCAAGC AGACCTTGAT GCCATTGTGA AGGAAAATGA GTGCCTGGAG 
    CTACGCCTTG CAGAAAACCC ATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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