ORF » Species Summary » Populus trichocarpa » LOC7473471 cDNA ORF clone

LOC7473471 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7473471 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7473471 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa19152 XM_002311653.2
Latest version!		 Populus trichocarpa proton-dependent oligopeptide transport family protein (POPTR_0008s17000g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
OPa435429 XM_002311653.3
Latest version!		 Populus trichocarpa protein NRT1/ PTR FAMILY 5.2 (LOC7473471), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa435430 XM_024607669.1
Latest version!		 Populus trichocarpa protein NRT1/ PTR FAMILY 5.2 (LOC7473471), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7473471 ( XM_002311653.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002311689.2 Populus trichocarpa proton-dependent oligopeptide transport family protein (POPTR_0008s17000g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa19152
    Clone ID Related Accession (Same CDS sequence) XM_002311653.2
    Accession Version XM_002311653.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1773bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product proton-dependent oligopeptide transport family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). On Dec 16, 2013 this sequence version replaced XM_002311653.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGAAAACG GGCTTGATGA GTGCACACAA GATGGGACTG TGGATCTCAA AGGAAATCCT 
    GTTCTTAGAT CCAAGAGAGG CGGATGGAGA GCTTGCTCCT TTGTTGTTGT GTATGAGGTT 
    TTCGAACGTA TGGCATACTA TGGGATATCA AGCAATCTTG TAGTGTACTT GACCAAGAAG 
    CTCCATGAAG GCACAGTGAG GTCGTCCAAT AATGTTACCA ATTGGGTTGG CACCATTTGG 
    ATGACTCCTA TCTTGGGTGC TTATGTTGCC GACGCTCATC TTGGTCGGTA CTGGACCTTC 
    CTCACGGCAT CTGTTATCTA TCTTTTGGGG ATGTCTCTAC TAACACTATC AGTTTCCCTT 
    CCTGCTCTAA GACCACCTCC CTGCAAGGAT GCCAATTCGG ACAACTGTAG AAAGGCCTCC 
    ACAATGCAAT TAGCAGTGTT CTTTGGCGCC CTCTACACGC TAGCTGTTGG AACTGGCGGC 
    ACAAAGCCGA ACATCTCGAC CATCGGTGCT GACCAATTTG ATGATTTCCA TCCTAAGGAG 
    AAGGCTCATA AGCTATCCTT CTTCAATTGG TGGATGTTCA GCATCTTCTT TGGAACACTC 
    TTTGCTAACA CTGTACTTGT GTACATACAA GACAATGTAG GTTGGGCATT AGGGTATGGG 
    CTTCCAACAC TTGGGCTTTT GATATCGGTG GCTATATTCT TAGCTGGCAC ACCATATTAT 
    AGGCACAGGC TGCCAACAGG AAGCCCATTT ACAAGGATGG CTAAGGTCAT AGTGGCAGCC 
    CTGCGGAAAT CGAAGGTTTC AGTCCCTAGC GACCCTAAGG AACTCTATGA GCTCGACTTG 
    GAAGAATATG CTAAGGGGGG GAAGTTCAGG ATTGATTCCA CACCAACCTT GAGGTTCCTC 
    ACTAAAGCTG CTGTGAAAAC AGGTCGAACT GACCCATGGA TGCTTTGCTC AGTTACTCAA 
    GTAGAGGAGA CTAAACAGAT GTTGAGAATG ATTCCGATAC TGATTGCCAC ATTCGTCCCA 
    AGCACGATGA TTGCTCAGAT AAATACTCTT TTTGTCAAGC AAGGCACTAC TCTTGATAGA 
    AACATTGGCA GCTTCAAAAT CCCACCAGCA AGCTTAGTTG GATTTGTGAC ACTATCAATG 
    CTTGTTTGTG TTGTGCTATA TGACAGGTTC TTTGTTAGTA TTGCTCGTAG ATGGACAAAG 
    AATCCCAGGG GGATCACTCT TCTTCAGAGA ATGGGAATAG GCCTTGTTTT TCACATTATA 
    ATCATGATAG CTGCATCACT GATTGAAAGG CACAGATTAA GTGTGGCCAG AGAACATGGC 
    TTGGTTGAGA ATGGAGGTCA AATCCCTTTG ACGATATTCA TTTTGCTTCC TCAATTTGTG 
    CTCATGGGAG TGGCTGATGC ATTTTTAGAG GTGGCCAAGC TCGAGTTCTT CTATGACCAG 
    GCACCTGAAA GCATGAAAAG TCTTGGCACT TCTTATTCAA CAACCAGTCT TGGAATTGGA 
    AACTTCCTTA GTAGTTTCCT TCTTTCCACA GTTTCTGATA TCACCAAGAA GCATGGTCAC 
    CGAGGGTGGA TTTTGAATAA CCTAAATGCT TCTCACCTGG ACTATTATTA TGCCTTCTTC 
    GCGATACTCA ACTTCTTGAA CTTCATTTTC TTCTTGATTG TGAATAGGTT GTATGTGTAT 
    AAGGCTGAAG TTTCAGATTC AATGGAAGTA CTGGCTGAAG AATTGAAAGG GATGACATTG 
    ACGGAACCTA ACCAAGTTTC TTCACATGAA TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002311689.2
    CDS53..1825
    Translation

    Target ORF information:

    RefSeq Version XM_002311653.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa proton-dependent oligopeptide transport family protein (POPTR_0008s17000g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002311653.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGAAAACG GGCTTGATGA GTGCACACAA GATGGGACTG TGGATCTCAA AGGAAATCCT 
    GTTCTTAGAT CCAAGAGAGG CGGATGGAGA GCTTGCTCCT TTGTTGTTGT GTATGAGGTT 
    TTCGAACGTA TGGCATACTA TGGGATATCA AGCAATCTTG TAGTGTACTT GACCAAGAAG 
    CTCCATGAAG GCACAGTGAG GTCGTCCAAT AATGTTACCA ATTGGGTTGG CACCATTTGG 
    ATGACTCCTA TCTTGGGTGC TTATGTTGCC GACGCTCATC TTGGTCGGTA CTGGACCTTC 
    CTCACGGCAT CTGTTATCTA TCTTTTGGGG ATGTCTCTAC TAACACTATC AGTTTCCCTT 
    CCTGCTCTAA GACCACCTCC CTGCAAGGAT GCCAATTCGG ACAACTGTAG AAAGGCCTCC 
    ACAATGCAAT TAGCAGTGTT CTTTGGCGCC CTCTACACGC TAGCTGTTGG AACTGGCGGC 
    ACAAAGCCGA ACATCTCGAC CATCGGTGCT GACCAATTTG ATGATTTCCA TCCTAAGGAG 
    AAGGCTCATA AGCTATCCTT CTTCAATTGG TGGATGTTCA GCATCTTCTT TGGAACACTC 
    TTTGCTAACA CTGTACTTGT GTACATACAA GACAATGTAG GTTGGGCATT AGGGTATGGG 
    CTTCCAACAC TTGGGCTTTT GATATCGGTG GCTATATTCT TAGCTGGCAC ACCATATTAT 
    AGGCACAGGC TGCCAACAGG AAGCCCATTT ACAAGGATGG CTAAGGTCAT AGTGGCAGCC 
    CTGCGGAAAT CGAAGGTTTC AGTCCCTAGC GACCCTAAGG AACTCTATGA GCTCGACTTG 
    GAAGAATATG CTAAGGGGGG GAAGTTCAGG ATTGATTCCA CACCAACCTT GAGGTTCCTC 
    ACTAAAGCTG CTGTGAAAAC AGGTCGAACT GACCCATGGA TGCTTTGCTC AGTTACTCAA 
    GTAGAGGAGA CTAAACAGAT GTTGAGAATG ATTCCGATAC TGATTGCCAC ATTCGTCCCA 
    AGCACGATGA TTGCTCAGAT AAATACTCTT TTTGTCAAGC AAGGCACTAC TCTTGATAGA 
    AACATTGGCA GCTTCAAAAT CCCACCAGCA AGCTTAGTTG GATTTGTGAC ACTATCAATG 
    CTTGTTTGTG TTGTGCTATA TGACAGGTTC TTTGTTAGTA TTGCTCGTAG ATGGACAAAG 
    AATCCCAGGG GGATCACTCT TCTTCAGAGA ATGGGAATAG GCCTTGTTTT TCACATTATA 
    ATCATGATAG CTGCATCACT GATTGAAAGG CACAGATTAA GTGTGGCCAG AGAACATGGC 
    TTGGTTGAGA ATGGAGGTCA AATCCCTTTG ACGATATTCA TTTTGCTTCC TCAATTTGTG 
    CTCATGGGAG TGGCTGATGC ATTTTTAGAG GTGGCCAAGC TCGAGTTCTT CTATGACCAG 
    GCACCTGAAA GCATGAAAAG TCTTGGCACT TCTTATTCAA CAACCAGTCT TGGAATTGGA 
    AACTTCCTTA GTAGTTTCCT TCTTTCCACA GTTTCTGATA TCACCAAGAA GCATGGTCAC 
    CGAGGGTGGA TTTTGAATAA CCTAAATGCT TCTCACCTGG ACTATTATTA TGCCTTCTTC 
    GCGATACTCA ACTTCTTGAA CTTCATTTTC TTCTTGATTG TGAATAGGTT GTATGTGTAT 
    AAGGCTGAAG TTTCAGATTC AATGGAAGTA CTGGCTGAAG AATTGAAAGG GATGACATTG 
    ACGGAACCTA ACCAAGTTTC TTCACATGAA TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7473471 ( XM_002311653.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002311689.2 Populus trichocarpa protein NRT1/ PTR FAMILY 5.2 (LOC7473471), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa435429
    Clone ID Related Accession (Same CDS sequence) XM_002311653.3
    Accession Version XM_002311653.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1773bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product protein NRT1/ PTR FAMILY 5.2 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002311653.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGAAAACG GGCTTGATGA GTGCACACAA GATGGGACTG TGGATCTCAA AGGAAATCCT 
    GTTCTTAGAT CCAAGAGAGG CGGATGGAGA GCTTGCTCCT TTGTTGTTGT GTATGAGGTT 
    TTCGAACGTA TGGCATACTA TGGGATATCA AGCAATCTTG TAGTGTACTT GACCAAGAAA 
    CTCCATGAAG GCACAGTGAG GTCGTCCAAT AATGTTACCA ATTGGGTTGG CACCATTTGG 
    ATGACTCCTA TCTTGGGTGC TTATGTTGCC GACGCTCATC TTGGTCGGTA CTGGACCTTC 
    CTCACGGCAT CTGTTATCTA TCTTTTGGGG ATGTCTCTAC TAACACTATC AGTTTCCCTT 
    CCTGCTCTAA GACCACCTCC CTGCAAGGAT GCCAATTCGG ACAACTGTAG AAAGGCCTCC 
    ACAATGCAAT TAGCAGTGTT CTTTGGCGCC CTCTACACGC TAGCTGTTGG AACTGGCGGC 
    ACAAAGCCGA ACATCTCGAC CATCGGTGCT GACCAATTTG ATGATTTCCA TCCTAAGGAG 
    AAGGCTCATA AGCTATCCTT CTTCAATTGG TGGATGTTCA GCATCTTCTT TGGAACACTC 
    TTTGCTAACA CTGTACTTGT GTACATACAA GACAATGTAG GTTGGGCATT AGGGTATGGG 
    CTTCCAACAC TTGGGCTTTT GATATCGGTG GCTATATTCT TAGCTGGCAC ACCATATTAT 
    AGGCACAGGC TGCCAACAGG AAGCCCATTT ACAAGGATGG CTAAGGTCAT AGTGGCAGCC 
    CTGCGGAAAT CGAAGGTTTC AGTCCCTAGC GACCCTAAGG AACTCTATGA GCTCGACTTG 
    GAAGAATATG CTAAGGGGGG GAAGTTCAGG ATTGATTCCA CACCAACCTT GAGGTTCCTC 
    ACTAAAGCTG CTGTGAAAAC AGGTCGAACT GACCCATGGA TGCTTTGCTC AGTTACTCAA 
    GTAGAGGAGA CTAAACAGAT GTTGAGAATG ATTCCGATAC TGATTGCCAC ATTCGTCCCA 
    AGCACGATGA TTGCTCAGAT AAATACTCTT TTTGTCAAGC AAGGCACTAC TCTTGATAGA 
    AACATTGGCA GCTTCAAAAT CCCACCAGCA AGCTTAGTTG GATTTGTGAC ACTATCAATG 
    CTTGTTTGTG TTGTGCTATA TGACAGGTTC TTTGTTAGTA TTGCTCGTAG ATGGACAAAG 
    AATCCCAGGG GGATCACTCT TCTTCAGAGA ATGGGAATAG GCCTTGTTTT TCACATTATA 
    ATCATGATAG CTGCATCACT GATTGAAAGG CACAGATTAA GTGTGGCCAG AGAACATGGC 
    TTGGTTGAGA ATGGAGGTCA AATCCCTTTG ACGATATTCA TTTTGCTTCC TCAATTTGTG 
    CTCATGGGAG TGGCTGATGC ATTTTTAGAG GTGGCCAAGC TCGAGTTCTT CTATGACCAG 
    GCACCTGAAA GCATGAAAAG TCTTGGCACT TCTTATTCAA CAACCAGTCT TGGAATTGGA 
    AACTTCCTTA GTAGTTTCCT TCTTTCCACA GTTTCTGATA TCACCAAGAA GCATGGTCAC 
    CGAGGGTGGA TTTTGAATAA CCTAAATGCT TCTCACCTGG ACTATTATTA TGCCTTCTTC 
    GCGATACTCA ACTTCTTGAA CTTCATTTTC TTCTTGATTG TGAATAGGTT GTATGTGTAT 
    AAGGCTGAAG TTTCAGATTC AATGGAAGTA CTGGCTGAAG AATTGAAAGG GATGACATTG 
    ACGGAACCTA ACCAAGTTTC TTCACATGAA TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002311689.2
    CDS67..1839
    Translation

    Target ORF information:

    RefSeq Version XM_002311653.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa protein NRT1/ PTR FAMILY 5.2 (LOC7473471), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002311653.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGAAAACG GGCTTGATGA GTGCACACAA GATGGGACTG TGGATCTCAA AGGAAATCCT 
    GTTCTTAGAT CCAAGAGAGG CGGATGGAGA GCTTGCTCCT TTGTTGTTGT GTATGAGGTT 
    TTCGAACGTA TGGCATACTA TGGGATATCA AGCAATCTTG TAGTGTACTT GACCAAGAAA 
    CTCCATGAAG GCACAGTGAG GTCGTCCAAT AATGTTACCA ATTGGGTTGG CACCATTTGG 
    ATGACTCCTA TCTTGGGTGC TTATGTTGCC GACGCTCATC TTGGTCGGTA CTGGACCTTC 
    CTCACGGCAT CTGTTATCTA TCTTTTGGGG ATGTCTCTAC TAACACTATC AGTTTCCCTT 
    CCTGCTCTAA GACCACCTCC CTGCAAGGAT GCCAATTCGG ACAACTGTAG AAAGGCCTCC 
    ACAATGCAAT TAGCAGTGTT CTTTGGCGCC CTCTACACGC TAGCTGTTGG AACTGGCGGC 
    ACAAAGCCGA ACATCTCGAC CATCGGTGCT GACCAATTTG ATGATTTCCA TCCTAAGGAG 
    AAGGCTCATA AGCTATCCTT CTTCAATTGG TGGATGTTCA GCATCTTCTT TGGAACACTC 
    TTTGCTAACA CTGTACTTGT GTACATACAA GACAATGTAG GTTGGGCATT AGGGTATGGG 
    CTTCCAACAC TTGGGCTTTT GATATCGGTG GCTATATTCT TAGCTGGCAC ACCATATTAT 
    AGGCACAGGC TGCCAACAGG AAGCCCATTT ACAAGGATGG CTAAGGTCAT AGTGGCAGCC 
    CTGCGGAAAT CGAAGGTTTC AGTCCCTAGC GACCCTAAGG AACTCTATGA GCTCGACTTG 
    GAAGAATATG CTAAGGGGGG GAAGTTCAGG ATTGATTCCA CACCAACCTT GAGGTTCCTC 
    ACTAAAGCTG CTGTGAAAAC AGGTCGAACT GACCCATGGA TGCTTTGCTC AGTTACTCAA 
    GTAGAGGAGA CTAAACAGAT GTTGAGAATG ATTCCGATAC TGATTGCCAC ATTCGTCCCA 
    AGCACGATGA TTGCTCAGAT AAATACTCTT TTTGTCAAGC AAGGCACTAC TCTTGATAGA 
    AACATTGGCA GCTTCAAAAT CCCACCAGCA AGCTTAGTTG GATTTGTGAC ACTATCAATG 
    CTTGTTTGTG TTGTGCTATA TGACAGGTTC TTTGTTAGTA TTGCTCGTAG ATGGACAAAG 
    AATCCCAGGG GGATCACTCT TCTTCAGAGA ATGGGAATAG GCCTTGTTTT TCACATTATA 
    ATCATGATAG CTGCATCACT GATTGAAAGG CACAGATTAA GTGTGGCCAG AGAACATGGC 
    TTGGTTGAGA ATGGAGGTCA AATCCCTTTG ACGATATTCA TTTTGCTTCC TCAATTTGTG 
    CTCATGGGAG TGGCTGATGC ATTTTTAGAG GTGGCCAAGC TCGAGTTCTT CTATGACCAG 
    GCACCTGAAA GCATGAAAAG TCTTGGCACT TCTTATTCAA CAACCAGTCT TGGAATTGGA 
    AACTTCCTTA GTAGTTTCCT TCTTTCCACA GTTTCTGATA TCACCAAGAA GCATGGTCAC 
    CGAGGGTGGA TTTTGAATAA CCTAAATGCT TCTCACCTGG ACTATTATTA TGCCTTCTTC 
    GCGATACTCA ACTTCTTGAA CTTCATTTTC TTCTTGATTG TGAATAGGTT GTATGTGTAT 
    AAGGCTGAAG TTTCAGATTC AATGGAAGTA CTGGCTGAAG AATTGAAAGG GATGACATTG 
    ACGGAACCTA ACCAAGTTTC TTCACATGAA TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7473471 ( XM_024607669.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024463437.1 Populus trichocarpa protein NRT1/ PTR FAMILY 5.2 (LOC7473471), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa435430
    Clone ID Related Accession (Same CDS sequence) XM_024607669.1
    Accession Version XM_024607669.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1644bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product protein NRT1/ PTR FAMILY 5.2 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCATACT ATGGGATATC AAGCAATCTT GTAGTGTACT TGACCAAGAA ACTCCATGAA 
    GGCACAGTGA GGTCGTCCAA TAATGTTACC AATTGGGTTG GCACCATTTG GATGACTCCT 
    ATCTTGGGTG CTTATGTTGC CGACGCTCAT CTTGGTCGGT ACTGGACCTT CCTCACGGCA 
    TCTGTTATCT ATCTTTTGGG GATGTCTCTA CTAACACTAT CAGTTTCCCT TCCTGCTCTA 
    AGACCACCTC CCTGCAAGGA TGCCAATTCG GACAACTGTA GAAAGGCCTC CACAATGCAA 
    TTAGCAGTGT TCTTTGGCGC CCTCTACACG CTAGCTGTTG GAACTGGCGG CACAAAGCCG 
    AACATCTCGA CCATCGGTGC TGACCAATTT GATGATTTCC ATCCTAAGGA GAAGGCTCAT 
    AAGCTATCCT TCTTCAATTG GTGGATGTTC AGCATCTTCT TTGGAACACT CTTTGCTAAC 
    ACTGTACTTG TGTACATACA AGACAATGTA GGTTGGGCAT TAGGGTATGG GCTTCCAACA 
    CTTGGGCTTT TGATATCGGT GGCTATATTC TTAGCTGGCA CACCATATTA TAGGCACAGG 
    CTGCCAACAG GAAGCCCATT TACAAGGATG GCTAAGGTCA TAGTGGCAGC CCTGCGGAAA 
    TCGAAGGTTT CAGTCCCTAG CGACCCTAAG GAACTCTATG AGCTCGACTT GGAAGAATAT 
    GCTAAGGGGG GGAAGTTCAG GATTGATTCC ACACCAACCT TGAGGTTCCT CACTAAAGCT 
    GCTGTGAAAA CAGGTCGAAC TGACCCATGG ATGCTTTGCT CAGTTACTCA AGTAGAGGAG 
    ACTAAACAGA TGTTGAGAAT GATTCCGATA CTGATTGCCA CATTCGTCCC AAGCACGATG 
    ATTGCTCAGA TAAATACTCT TTTTGTCAAG CAAGGCACTA CTCTTGATAG AAACATTGGC 
    AGCTTCAAAA TCCCACCAGC AAGCTTAGTT GGATTTGTGA CACTATCAAT GCTTGTTTGT 
    GTTGTGCTAT ATGACAGGTT CTTTGTTAGT ATTGCTCGTA GATGGACAAA GAATCCCAGG 
    GGGATCACTC TTCTTCAGAG AATGGGAATA GGCCTTGTTT TTCACATTAT AATCATGATA 
    GCTGCATCAC TGATTGAAAG GCACAGATTA AGTGTGGCCA GAGAACATGG CTTGGTTGAG 
    AATGGAGGTC AAATCCCTTT GACGATATTC ATTTTGCTTC CTCAATTTGT GCTCATGGGA 
    GTGGCTGATG CATTTTTAGA GGTGGCCAAG CTCGAGTTCT TCTATGACCA GGCACCTGAA 
    AGCATGAAAA GTCTTGGCAC TTCTTATTCA ACAACCAGTC TTGGAATTGG AAACTTCCTT 
    AGTAGTTTCC TTCTTTCCAC AGTTTCTGAT ATCACCAAGA AGCATGGTCA CCGAGGGTGG 
    ATTTTGAATA ACCTAAATGC TTCTCACCTG GACTATTATT ATGCCTTCTT CGCGATACTC 
    AACTTCTTGA ACTTCATTTT CTTCTTGATT GTGAATAGGT TGTATGTGTA TAAGGCTGAA 
    GTTTCAGATT CAATGGAAGT ACTGGCTGAA GAATTGAAAG GGATGACATT GACGGAACCT 
    AACCAAGTTT CTTCACATGA ATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024463437.1
    CDS633..2276
    Translation

    Target ORF information:

    RefSeq Version XM_024607669.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa protein NRT1/ PTR FAMILY 5.2 (LOC7473471), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024607669.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCATACT ATGGGATATC AAGCAATCTT GTAGTGTACT TGACCAAGAA ACTCCATGAA 
    GGCACAGTGA GGTCGTCCAA TAATGTTACC AATTGGGTTG GCACCATTTG GATGACTCCT 
    ATCTTGGGTG CTTATGTTGC CGACGCTCAT CTTGGTCGGT ACTGGACCTT CCTCACGGCA 
    TCTGTTATCT ATCTTTTGGG GATGTCTCTA CTAACACTAT CAGTTTCCCT TCCTGCTCTA 
    AGACCACCTC CCTGCAAGGA TGCCAATTCG GACAACTGTA GAAAGGCCTC CACAATGCAA 
    TTAGCAGTGT TCTTTGGCGC CCTCTACACG CTAGCTGTTG GAACTGGCGG CACAAAGCCG 
    AACATCTCGA CCATCGGTGC TGACCAATTT GATGATTTCC ATCCTAAGGA GAAGGCTCAT 
    AAGCTATCCT TCTTCAATTG GTGGATGTTC AGCATCTTCT TTGGAACACT CTTTGCTAAC 
    ACTGTACTTG TGTACATACA AGACAATGTA GGTTGGGCAT TAGGGTATGG GCTTCCAACA 
    CTTGGGCTTT TGATATCGGT GGCTATATTC TTAGCTGGCA CACCATATTA TAGGCACAGG 
    CTGCCAACAG GAAGCCCATT TACAAGGATG GCTAAGGTCA TAGTGGCAGC CCTGCGGAAA 
    TCGAAGGTTT CAGTCCCTAG CGACCCTAAG GAACTCTATG AGCTCGACTT GGAAGAATAT 
    GCTAAGGGGG GGAAGTTCAG GATTGATTCC ACACCAACCT TGAGGTTCCT CACTAAAGCT 
    GCTGTGAAAA CAGGTCGAAC TGACCCATGG ATGCTTTGCT CAGTTACTCA AGTAGAGGAG 
    ACTAAACAGA TGTTGAGAAT GATTCCGATA CTGATTGCCA CATTCGTCCC AAGCACGATG 
    ATTGCTCAGA TAAATACTCT TTTTGTCAAG CAAGGCACTA CTCTTGATAG AAACATTGGC 
    AGCTTCAAAA TCCCACCAGC AAGCTTAGTT GGATTTGTGA CACTATCAAT GCTTGTTTGT 
    GTTGTGCTAT ATGACAGGTT CTTTGTTAGT ATTGCTCGTA GATGGACAAA GAATCCCAGG 
    GGGATCACTC TTCTTCAGAG AATGGGAATA GGCCTTGTTT TTCACATTAT AATCATGATA 
    GCTGCATCAC TGATTGAAAG GCACAGATTA AGTGTGGCCA GAGAACATGG CTTGGTTGAG 
    AATGGAGGTC AAATCCCTTT GACGATATTC ATTTTGCTTC CTCAATTTGT GCTCATGGGA 
    GTGGCTGATG CATTTTTAGA GGTGGCCAAG CTCGAGTTCT TCTATGACCA GGCACCTGAA 
    AGCATGAAAA GTCTTGGCAC TTCTTATTCA ACAACCAGTC TTGGAATTGG AAACTTCCTT 
    AGTAGTTTCC TTCTTTCCAC AGTTTCTGAT ATCACCAAGA AGCATGGTCA CCGAGGGTGG 
    ATTTTGAATA ACCTAAATGC TTCTCACCTG GACTATTATT ATGCCTTCTT CGCGATACTC 
    AACTTCTTGA ACTTCATTTT CTTCTTGATT GTGAATAGGT TGTATGTGTA TAAGGCTGAA 
    GTTTCAGATT CAATGGAAGT ACTGGCTGAA GAATTGAAAG GGATGACATT GACGGAACCT 
    AACCAAGTTT CTTCACATGA ATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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