ORF » Species Summary » Populus trichocarpa » POPTR_0006s29260g cDNA ORF clone

POPTR_0006s29260g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0006s29260g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0006s29260g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa16857 XM_006382134.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0006s29260g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
OPa431181 XM_006382134.2
Latest version!		 Populus trichocarpa 26S proteasome non-ATPase regulatory subunit 11 homolog (LOC18100784), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0006s29260g ( XM_006382134.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006382196.1 Populus trichocarpa hypothetical protein (POPTR_0006s29260g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa16857
    Clone ID Related Accession (Same CDS sequence) XM_006382134.1
    Accession Version XM_006382134.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1269bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008472). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGACTGCAT CATATCTTCC AGCGACAACA GACTCAATTG CTCTGGCTTC AAAAGCTGAG 
    GACCCATTTG AGGCCATTTC CATCCTACAC AAAATACTTG AAAACCCTTG TTCTTCTCCG 
    GATGCTATTC GCATAAAGGA ACAGGCCATT ACCATTCTAT CGGACCTTTT CACACAACAT 
    AACATGGCTG AGGATCTTCA CGCTCTTCTC TCTCAGTTGA GGCCTTTCTT TGCCGTGATC 
    CCAAAGGCTA AAACTGCCAA AATCGTCAGG GGAATAATCG ACTCTGTTTC CAAAATACCT 
    GGAACATCTG ATGTCCAAAT TGCTCTTTGC AAAGAACTAG TGCTGTGGGC TCGTGCCGAA 
    AAGCGTGCTC TCCTGAGGCA GCGAGTTGAG ACAAGGCTTG CAGCTCTTTT AGTGGAAACT 
    AAGGAGTATT CAGAGGCACT GGCCCTGCTT ACCAACTTGG TAAAAGAGGT AAAGGGAGTG 
    GATGACAAGC GACTTCTTGT GGAAATACTC TTGCTTGAGA GTAAGCTACA CTATTTGTTG 
    AAGGACCGTC ACAAGGCGAG AACTGCTCTC ACAGCTGCGA AGAAAGCTGC GAATGCTGTC 
    TATATGCCAC CAACTCAACA AGGTGCCATT GATTTGCATA GTGGGATTCT CTTTGCTGAG 
    GACAAGGAGT ATACAACAGC TTATAGCTAT TTCTTTGAAG CATTTGAAGC ACTTAAAGCT 
    GTTGAAGACC CAAGAGCAAT TTTCAGTCTT AAATACATGC TATTGTGCAA GATCATGACG 
    AACCAATCTA AAGATGTTGC TGGGCTGATT TCTTCTAAGG CAGGCCTTAA ATATTTTGGG 
    CCAGAACTGA ATGTCATGAA AGCAGTCGCC GATGCTCATT CCAACCGATC TTTGAGGTCC 
    TTTGAAAAGG TGCTGCGGGA TTACAGGTAT CAGCTGGAGA CAGACCCAAC TATCTACAAT 
    CATCTCTCAT CCCGTTATGA AGCTCTTGTG GAACTAAACC TGTGTAGATA TATTGAGCCT 
    TTCTCAAGGG TCGAGATTCC ACACATTGCT GGGCTGATTG ATTTGCCTGT TGACTTTGTG 
    GAGAAAAAGC TGGCACAAAT GATTCTGGAC AGGAAGTTTG TTGGGATACT GGACCAAGGT 
    GCTGGACATA TCATAATATT TGATGAACCC AAGAAGGATG CTCTCCTCCC TGCAGCTCTG 
    AAAACCATCT CCAGCATTGG CAAGGTTGTG GACAACCTTT TTGTCAAATC TTCCAAGATT 
    GTGCACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006382196.1
    CDS1..1269
    Translation

    Target ORF information:

    RefSeq Version XM_006382134.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0006s29260g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006382134.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGACTGCAT CATATCTTCC AGCGACAACA GACTCAATTG CTCTGGCTTC AAAAGCTGAG 
    GACCCATTTG AGGCCATTTC CATCCTACAC AAAATACTTG AAAACCCTTG TTCTTCTCCG 
    GATGCTATTC GCATAAAGGA ACAGGCCATT ACCATTCTAT CGGACCTTTT CACACAACAT 
    AACATGGCTG AGGATCTTCA CGCTCTTCTC TCTCAGTTGA GGCCTTTCTT TGCCGTGATC 
    CCAAAGGCTA AAACTGCCAA AATCGTCAGG GGAATAATCG ACTCTGTTTC CAAAATACCT 
    GGAACATCTG ATGTCCAAAT TGCTCTTTGC AAAGAACTAG TGCTGTGGGC TCGTGCCGAA 
    AAGCGTGCTC TCCTGAGGCA GCGAGTTGAG ACAAGGCTTG CAGCTCTTTT AGTGGAAACT 
    AAGGAGTATT CAGAGGCACT GGCCCTGCTT ACCAACTTGG TAAAAGAGGT AAAGGGAGTG 
    GATGACAAGC GACTTCTTGT GGAAATACTC TTGCTTGAGA GTAAGCTACA CTATTTGTTG 
    AAGGACCGTC ACAAGGCGAG AACTGCTCTC ACAGCTGCGA AGAAAGCTGC GAATGCTGTC 
    TATATGCCAC CAACTCAACA AGGTGCCATT GATTTGCATA GTGGGATTCT CTTTGCTGAG 
    GACAAGGAGT ATACAACAGC TTATAGCTAT TTCTTTGAAG CATTTGAAGC ACTTAAAGCT 
    GTTGAAGACC CAAGAGCAAT TTTCAGTCTT AAATACATGC TATTGTGCAA GATCATGACG 
    AACCAATCTA AAGATGTTGC TGGGCTGATT TCTTCTAAGG CAGGCCTTAA ATATTTTGGG 
    CCAGAACTGA ATGTCATGAA AGCAGTCGCC GATGCTCATT CCAACCGATC TTTGAGGTCC 
    TTTGAAAAGG TGCTGCGGGA TTACAGGTAT CAGCTGGAGA CAGACCCAAC TATCTACAAT 
    CATCTCTCAT CCCGTTATGA AGCTCTTGTG GAACTAAACC TGTGTAGATA TATTGAGCCT 
    TTCTCAAGGG TCGAGATTCC ACACATTGCT GGGCTGATTG ATTTGCCTGT TGACTTTGTG 
    GAGAAAAAGC TGGCACAAAT GATTCTGGAC AGGAAGTTTG TTGGGATACT GGACCAAGGT 
    GCTGGACATA TCATAATATT TGATGAACCC AAGAAGGATG CTCTCCTCCC TGCAGCTCTG 
    AAAACCATCT CCAGCATTGG CAAGGTTGTG GACAACCTTT TTGTCAAATC TTCCAAGATT 
    GTGCACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0006s29260g ( XM_006382134.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006382196.2 Populus trichocarpa 26S proteasome non-ATPase regulatory subunit 11 homolog (LOC18100784), mRNA.
    Price & Availability↑
    CloneID OPa431181
    Clone ID Related Accession (Same CDS sequence) XM_006382134.2
    Accession Version XM_006382134.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1362bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product 26S proteasome non-ATPase regulatory subunit 11 homolog
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037290.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006382134.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGTTGCACT GCCCCCCATT TAGCATTGCC GATTGTCTGA GTCTCCCTCT CTGTCCGATC 
    ACTCCCTCTT TACTTCTTCT GCAAGCTGCA GCTATGACTG CATCATATCT TCCAGCGACA 
    ACAGACTCAA TTGCTCTGGC TTCAAAAGCT GAGGACCCAT TTGAGGCCAT TTCCATCCTA 
    CACAAAATAC TTGAAAACCC TTCTTCTTCT CCGGATGCAA TTCGCATAAA GGAACAGGCC 
    ATTACCATTC TATCGGACCT TTTCACACAA CATAACATGG CTGAGGATCT TCACGCTCTT 
    CTCTCTCAGT TGAGGCCTTT CTTTGCCGTG ATCCCAAAGG CTAAAACTGC CAAAATCGTC 
    AGGGGAATAA TCGACTCTGT TTCCAAAATA CCTGGAACAT CTGATGTCCA AATTGCTCTT 
    TGCAAAGAAC TAGTGCTGTG GGCTCGTGCC GAAAAGCGTG CTCTCCTGAG GCAGCGAGTT 
    GAGACAAGGC TTGCAGCTCT TTTAGTGGAA ACTAAGGAGT ATTCAGAGGC ACTGGCCCTG 
    CTTACCAACT TGGTAAAAGA GGTAAAGGGA GTGGATGACA AGCGACTTCT TGTGGAAATA 
    CTCTTGCTTG AGAGTAAGCT ACACTATTTG TTGAAGGACC GTCACAAGGC GAGAACTGCT 
    CTCACAGCTG CGAAGAAAGC TGCGAATGCT GTCTATATGC CACCAACTCA ACAAGGTGCC 
    ATTGATTTGC ATAGTGGGAT TCTCTTTGCT GAGGACAAGG AGTATACAAC AGCTTATAGC 
    TATTTCTTTG AAGCATTTGA AGCACTTAAA GCTGTTGAAG ACCCAAGAGC AATTTTCAGT 
    CTTAAATACA TGCTATTGTG CAAGATCATG ACGAACCAAT CTAAAGATGT TGCTGGGCTG 
    ATTTCTTCTA AGGCAGGCCT TAAATATTTT GGGCCAGAAC TGAATGTCAT GAAAGCAGTC 
    GCCGATGCTC ATTCCAACCG ATCTTTGAGG TCCTTTGAAA AGGTGCTGCG GGATTACAGG 
    TATCAGCTGG AGACAGACCC AACTATCTAC AATCATCTCT CATCCCGTTA TGAAGCTCTT 
    GTGGAACTAA ACCTGTGTAG ATATATTGAG CCTTTCTCAA GGGTCGAGAT TCCACACATT 
    GCTGGGCTGA TTGATTTGCC TGTTGACTTT GTGGAGAAAA AGCTGGCACA AATGATTCTG 
    GACAGGAAGT TTGTTGGGAT ACTGGACCAA GGTGCTGGAC ATATCATAAT ATTTGATGAA 
    CCCAAGAAGG ATGCTCTCCT CCCTGCAGCT CTGAAAACCA TCTCCAGCAT TGGCAAGGTT 
    GTGGACAACC TTTTTGTCAA ATCTTCCAAG ATTGTGCACT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006382196.2
    CDS137..1498
    Translation

    Target ORF information:

    RefSeq Version XM_006382134.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 26S proteasome non-ATPase regulatory subunit 11 homolog (LOC18100784), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006382134.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGTTGCACT GCCCCCCATT TAGCATTGCC GATTGTCTGA GTCTCCCTCT CTGTCCGATC 
    ACTCCCTCTT TACTTCTTCT GCAAGCTGCA GCTATGACTG CATCATATCT TCCAGCGACA 
    ACAGACTCAA TTGCTCTGGC TTCAAAAGCT GAGGACCCAT TTGAGGCCAT TTCCATCCTA 
    CACAAAATAC TTGAAAACCC TTCTTCTTCT CCGGATGCAA TTCGCATAAA GGAACAGGCC 
    ATTACCATTC TATCGGACCT TTTCACACAA CATAACATGG CTGAGGATCT TCACGCTCTT 
    CTCTCTCAGT TGAGGCCTTT CTTTGCCGTG ATCCCAAAGG CTAAAACTGC CAAAATCGTC 
    AGGGGAATAA TCGACTCTGT TTCCAAAATA CCTGGAACAT CTGATGTCCA AATTGCTCTT 
    TGCAAAGAAC TAGTGCTGTG GGCTCGTGCC GAAAAGCGTG CTCTCCTGAG GCAGCGAGTT 
    GAGACAAGGC TTGCAGCTCT TTTAGTGGAA ACTAAGGAGT ATTCAGAGGC ACTGGCCCTG 
    CTTACCAACT TGGTAAAAGA GGTAAAGGGA GTGGATGACA AGCGACTTCT TGTGGAAATA 
    CTCTTGCTTG AGAGTAAGCT ACACTATTTG TTGAAGGACC GTCACAAGGC GAGAACTGCT 
    CTCACAGCTG CGAAGAAAGC TGCGAATGCT GTCTATATGC CACCAACTCA ACAAGGTGCC 
    ATTGATTTGC ATAGTGGGAT TCTCTTTGCT GAGGACAAGG AGTATACAAC AGCTTATAGC 
    TATTTCTTTG AAGCATTTGA AGCACTTAAA GCTGTTGAAG ACCCAAGAGC AATTTTCAGT 
    CTTAAATACA TGCTATTGTG CAAGATCATG ACGAACCAAT CTAAAGATGT TGCTGGGCTG 
    ATTTCTTCTA AGGCAGGCCT TAAATATTTT GGGCCAGAAC TGAATGTCAT GAAAGCAGTC 
    GCCGATGCTC ATTCCAACCG ATCTTTGAGG TCCTTTGAAA AGGTGCTGCG GGATTACAGG 
    TATCAGCTGG AGACAGACCC AACTATCTAC AATCATCTCT CATCCCGTTA TGAAGCTCTT 
    GTGGAACTAA ACCTGTGTAG ATATATTGAG CCTTTCTCAA GGGTCGAGAT TCCACACATT 
    GCTGGGCTGA TTGATTTGCC TGTTGACTTT GTGGAGAAAA AGCTGGCACA AATGATTCTG 
    GACAGGAAGT TTGTTGGGAT ACTGGACCAA GGTGCTGGAC ATATCATAAT ATTTGATGAA 
    CCCAAGAAGG ATGCTCTCCT CCCTGCAGCT CTGAAAACCA TCTCCAGCAT TGGCAAGGTT 
    GTGGACAACC TTTTTGTCAA ATCTTCCAAG ATTGTGCACT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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