ORF » Species Summary » Populus trichocarpa » LOC18099736 cDNA ORF clone

LOC18099736 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18099736 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18099736 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa15886 XM_006380808.2
Latest version!		 Populus trichocarpa anthocyanidin 3-O-glucosyltransferase 6 (LOC18099736), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
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OPa15886 XM_006380808.1 Populus trichocarpa hypothetical protein (POPTR_0006s00920g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18099736 ( XM_006380808.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006380870.1 Populus trichocarpa hypothetical protein (POPTR_0006s00920g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa15886
    Clone ID Related Accession (Same CDS sequence) XM_006380808.1 , XM_006380808.2
    Accession Version XM_006380808.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1464bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008472). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGAAAAAAG CAGAGGTGGT GTTAATCCCC ATACCTGCTA TGGGTCATAT TGTAGCTCTG 
    GTAGAGGTAG CTAAGCTTCT TGTTCAACGT GATGACAGGC TTTCCACCAC TATCTGCATA 
    ATGCATCCAG TTCTTGATCC TAGCACCACC AAATACACCG AGTCACTTGC TGCATCAACT 
    CTGCCTGATC GTATGCGAGT CGTTAACTTG CCGAGTCTTG AGTCCAATAC AGAAGATACT 
    AAAGACCGTA ACTGGCTCAC TTCTATGATT GAAAGCCAAA AACCCCATGT CGAAGAATAT 
    GTTTCGAAGA TGAGAGCTCA GTCCCAGTTG AGTCCCGACT CTCCTCAACT GGCTGGGTTT 
    ATTTTTGATA CGTTTGCTAC TGGGATGAAA GATGTGGCTA ATGGATTTGG AGTTCCCTGG 
    TATGTTTTCT CTGCTTCAGG TGCAGCTTTT ATTTGTTCCA TGTTTTATCT TCAGGCTCTT 
    CATGATGACG AGGGAGTGAA CCTCACTGAG TTCAAGAACT CGGATGCTCT GTTAGAAGTT 
    CCGGGTCTGG CGAACCCACT TCCTGCTAAA CTTTTGCCTT CGATGGTGTT CAGGGAAGAC 
    ATGCTCACTA TTTTTCTTGA ACATGCAAGA ACATTGAAGG AAACTAGGAG TATCTTGGTA 
    AATACATTTT TAGAGTTCGA ATCTTATGCG GTTCACTCTC TTTCCAATGG TAAAAACCCT 
    CCCGTGTATC CCGTTGGACC CATGGTGAAA CATGTAGGAG ATGGTCGTGA TTTGAGGTCG 
    GATGAGAGCA ACAAATATAG GGACATTATG GAATGGCTTG ATGATCAACC TCCATTGTCA 
    GTTATGTTCT TATGCTTCGG AAGTTGGGGA AGTTTTTGTG GAAAACAGGT GAAAGAGATT 
    GCTTGTGCAC TAGAACATTG TGGACATCGG TTTTTGTGGT CCTTACGTAA ACCTTCATCA 
    CAGAAAGGTA AAATAGAATC ACCAAGTGAT TATCTAAATT TTCAAGAAAT TTTACCTGAA 
    GGTTTTTTAG ATCGTACACT TAAGATCGGA AAGGTGATTG GATGGGCTCC CCAAGTGGAT 
    ATTTTAGCTC ATCCAGCAGT AGGAGGATTT GCATCACATT GTGGATGGAA TTCTATACTA 
    GAGAGTGTAA GATTTGGTGT TCCGGTTGCT ACATGGCCAT TATACGCAGA GCAACAATTT 
    AATGCCTTCC AAATGGTGAT TGACTTAGGA TTAGCTGTGG AAATTCAAAT GGATTACAGG 
    AGGGATTTTC TTGGTGATAA TGAGATAATT GTGAGTAGTG ATGATATAGT GAAAGCAATA 
    AAACATGTCA TGGAGGAGGA TGGCGAAGTG CGAAAGAAGG TAAAAGAGAT GAGCAGAATA 
    AGTGAGAAAA GCTTGAAGGA TGGTGGATCT TCATTCTCTT CGTTGGGTCG TCTAATTGAA 
    GACATGATAG ACAACATATC TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006380870.1
    CDS1..1464
    Translation

    Target ORF information:

    RefSeq Version XM_006380808.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0006s00920g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006380808.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGAAAAAAG CAGAGGTGGT GTTAATCCCC ATACCTGCTA TGGGTCATAT TGTAGCTCTG 
    GTAGAGGTAG CTAAGCTTCT TGTTCAACGT GATGACAGGC TTTCCACCAC TATCTGCATA 
    ATGCATCCAG TTCTTGATCC TAGCACCACC AAATACACCG AGTCACTTGC TGCATCAACT 
    CTGCCTGATC GTATGCGAGT CGTTAACTTG CCGAGTCTTG AGTCCAATAC AGAAGATACT 
    AAAGACCGTA ACTGGCTCAC TTCTATGATT GAAAGCCAAA AACCCCATGT CGAAGAATAT 
    GTTTCGAAGA TGAGAGCTCA GTCCCAGTTG AGTCCCGACT CTCCTCAACT GGCTGGGTTT 
    ATTTTTGATA CGTTTGCTAC TGGGATGAAA GATGTGGCTA ATGGATTTGG AGTTCCCTGG 
    TATGTTTTCT CTGCTTCAGG TGCAGCTTTT ATTTGTTCCA TGTTTTATCT TCAGGCTCTT 
    CATGATGACG AGGGAGTGAA CCTCACTGAG TTCAAGAACT CGGATGCTCT GTTAGAAGTT 
    CCGGGTCTGG CGAACCCACT TCCTGCTAAA CTTTTGCCTT CGATGGTGTT CAGGGAAGAC 
    ATGCTCACTA TTTTTCTTGA ACATGCAAGA ACATTGAAGG AAACTAGGAG TATCTTGGTA 
    AATACATTTT TAGAGTTCGA ATCTTATGCG GTTCACTCTC TTTCCAATGG TAAAAACCCT 
    CCCGTGTATC CCGTTGGACC CATGGTGAAA CATGTAGGAG ATGGTCGTGA TTTGAGGTCG 
    GATGAGAGCA ACAAATATAG GGACATTATG GAATGGCTTG ATGATCAACC TCCATTGTCA 
    GTTATGTTCT TATGCTTCGG AAGTTGGGGA AGTTTTTGTG GAAAACAGGT GAAAGAGATT 
    GCTTGTGCAC TAGAACATTG TGGACATCGG TTTTTGTGGT CCTTACGTAA ACCTTCATCA 
    CAGAAAGGTA AAATAGAATC ACCAAGTGAT TATCTAAATT TTCAAGAAAT TTTACCTGAA 
    GGTTTTTTAG ATCGTACACT TAAGATCGGA AAGGTGATTG GATGGGCTCC CCAAGTGGAT 
    ATTTTAGCTC ATCCAGCAGT AGGAGGATTT GCATCACATT GTGGATGGAA TTCTATACTA 
    GAGAGTGTAA GATTTGGTGT TCCGGTTGCT ACATGGCCAT TATACGCAGA GCAACAATTT 
    AATGCCTTCC AAATGGTGAT TGACTTAGGA TTAGCTGTGG AAATTCAAAT GGATTACAGG 
    AGGGATTTTC TTGGTGATAA TGAGATAATT GTGAGTAGTG ATGATATAGT GAAAGCAATA 
    AAACATGTCA TGGAGGAGGA TGGCGAAGTG CGAAAGAAGG TAAAAGAGAT GAGCAGAATA 
    AGTGAGAAAA GCTTGAAGGA TGGTGGATCT TCATTCTCTT CGTTGGGTCG TCTAATTGAA 
    GACATGATAG ACAACATATC TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18099736 ( XM_006380808.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006380870.1 Populus trichocarpa anthocyanidin 3-O-glucosyltransferase 6 (LOC18099736), mRNA.
    Price & Availability↑
    CloneID OPa15886
    Clone ID Related Accession (Same CDS sequence) XM_006380808.1 , XM_006380808.2
    Accession Version XM_006380808.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1464bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product anthocyanidin 3-O-glucosyltransferase 6
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037290.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006380808.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGAAAAAAG CAGAGGTGGT GTTAATCCCC ATACCTGCTA TGGGTCATAT TGTAGCTCTG 
    GTAGAGGTAG CTAAGCTTCT TGTTCAACGT GATGACAGGC TTTCCACCAC TATCTGCATA 
    ATGCATCCAG TTCTTGATCC TAGCACCACC AAATACACCG AGTCACTTGC TGCATCAACT 
    CTGCCTGATC GTATGCGAGT CGTTAACTTG CCGAGTCTTG AGTCCAATAC AGAAGATACT 
    AAAGACCGTA ACTGGCTCAC TTCTATGATT GAAAGCCAAA AACCCCATGT CGAAGAATAT 
    GTTTCGAAGA TGAGAGCTCA GTCCCAGTTG AGTCCCGACT CTCCTCAACT GGCTGGGTTT 
    ATTTTTGATA CGTTTGCTAC TGGGATGAAA GATGTGGCTA ATGGATTTGG AGTTCCCTGG 
    TATGTTTTCT CTGCTTCAGG TGCAGCTTTT ATTTGTTCCA TGTTTTATCT TCAGGCTCTT 
    CATGATGACG AGGGAGTGAA CCTCACTGAG TTCAAGAACT CGGATGCTCT GTTAGAAGTT 
    CCGGGTCTGG CGAACCCACT TCCTGCTAAA CTTTTGCCTT CGATGGTGTT CAGGGAAGAC 
    ATGCTCACTA TTTTTCTTGA ACATGCAAGA ACATTGAAGG AAACTAGGAG TATCTTGGTA 
    AATACATTTT TAGAGTTCGA ATCTTATGCG GTTCACTCTC TTTCCAATGG TAAAAACCCT 
    CCCGTGTATC CCGTTGGACC CATGGTGAAA CATGTAGGAG ATGGTCGTGA TTTGAGGTCG 
    GATGAGAGCA ACAAATATAG GGACATTATG GAATGGCTTG ATGATCAACC TCCATTGTCA 
    GTTATGTTCT TATGCTTCGG AAGTTGGGGA AGTTTTTGTG GAAAACAGGT GAAAGAGATT 
    GCTTGTGCAC TAGAACATTG TGGACATCGG TTTTTGTGGT CCTTACGTAA ACCTTCATCA 
    CAGAAAGGTA AAATAGAATC ACCAAGTGAT TATCTAAATT TTCAAGAAAT TTTACCTGAA 
    GGTTTTTTAG ATCGTACACT TAAGATCGGA AAGGTGATTG GATGGGCTCC CCAAGTGGAT 
    ATTTTAGCTC ATCCAGCAGT AGGAGGATTT GCATCACATT GTGGATGGAA TTCTATACTA 
    GAGAGTGTAA GATTTGGTGT TCCGGTTGCT ACATGGCCAT TATACGCAGA GCAACAATTT 
    AATGCCTTCC AAATGGTGAT TGACTTAGGA TTAGCTGTGG AAATTCAAAT GGATTACAGG 
    AGGGATTTTC TTGGTGATAA TGAGATAATT GTGAGTAGTG ATGATATAGT GAAAGCAATA 
    AAACATGTCA TGGAGGAGGA TGGCGAAGTG CGAAAGAAGG TAAAAGAGAT GAGCAGAATA 
    AGTGAGAAAA GCTTGAAGGA TGGTGGATCT TCATTCTCTT CGTTGGGTCG TCTAATTGAA 
    GACATGATAG ACAACATATC TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006380870.1
    CDS184..1647
    Translation

    Target ORF information:

    RefSeq Version XM_006380808.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa anthocyanidin 3-O-glucosyltransferase 6 (LOC18099736), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006380808.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGAAAAAAG CAGAGGTGGT GTTAATCCCC ATACCTGCTA TGGGTCATAT TGTAGCTCTG 
    GTAGAGGTAG CTAAGCTTCT TGTTCAACGT GATGACAGGC TTTCCACCAC TATCTGCATA 
    ATGCATCCAG TTCTTGATCC TAGCACCACC AAATACACCG AGTCACTTGC TGCATCAACT 
    CTGCCTGATC GTATGCGAGT CGTTAACTTG CCGAGTCTTG AGTCCAATAC AGAAGATACT 
    AAAGACCGTA ACTGGCTCAC TTCTATGATT GAAAGCCAAA AACCCCATGT CGAAGAATAT 
    GTTTCGAAGA TGAGAGCTCA GTCCCAGTTG AGTCCCGACT CTCCTCAACT GGCTGGGTTT 
    ATTTTTGATA CGTTTGCTAC TGGGATGAAA GATGTGGCTA ATGGATTTGG AGTTCCCTGG 
    TATGTTTTCT CTGCTTCAGG TGCAGCTTTT ATTTGTTCCA TGTTTTATCT TCAGGCTCTT 
    CATGATGACG AGGGAGTGAA CCTCACTGAG TTCAAGAACT CGGATGCTCT GTTAGAAGTT 
    CCGGGTCTGG CGAACCCACT TCCTGCTAAA CTTTTGCCTT CGATGGTGTT CAGGGAAGAC 
    ATGCTCACTA TTTTTCTTGA ACATGCAAGA ACATTGAAGG AAACTAGGAG TATCTTGGTA 
    AATACATTTT TAGAGTTCGA ATCTTATGCG GTTCACTCTC TTTCCAATGG TAAAAACCCT 
    CCCGTGTATC CCGTTGGACC CATGGTGAAA CATGTAGGAG ATGGTCGTGA TTTGAGGTCG 
    GATGAGAGCA ACAAATATAG GGACATTATG GAATGGCTTG ATGATCAACC TCCATTGTCA 
    GTTATGTTCT TATGCTTCGG AAGTTGGGGA AGTTTTTGTG GAAAACAGGT GAAAGAGATT 
    GCTTGTGCAC TAGAACATTG TGGACATCGG TTTTTGTGGT CCTTACGTAA ACCTTCATCA 
    CAGAAAGGTA AAATAGAATC ACCAAGTGAT TATCTAAATT TTCAAGAAAT TTTACCTGAA 
    GGTTTTTTAG ATCGTACACT TAAGATCGGA AAGGTGATTG GATGGGCTCC CCAAGTGGAT 
    ATTTTAGCTC ATCCAGCAGT AGGAGGATTT GCATCACATT GTGGATGGAA TTCTATACTA 
    GAGAGTGTAA GATTTGGTGT TCCGGTTGCT ACATGGCCAT TATACGCAGA GCAACAATTT 
    AATGCCTTCC AAATGGTGAT TGACTTAGGA TTAGCTGTGG AAATTCAAAT GGATTACAGG 
    AGGGATTTTC TTGGTGATAA TGAGATAATT GTGAGTAGTG ATGATATAGT GAAAGCAATA 
    AAACATGTCA TGGAGGAGGA TGGCGAAGTG CGAAAGAAGG TAAAAGAGAT GAGCAGAATA 
    AGTGAGAAAA GCTTGAAGGA TGGTGGATCT TCATTCTCTT CGTTGGGTCG TCTAATTGAA 
    GACATGATAG ACAACATATC TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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