LOC110994307 cDNA ORF clone, Pieris rapae(cabbage white)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC110994307
Entrez Gene ID	110994307
Full Name	DDB1- and CUL4-associated factor 5
Gene Type	protein-coding
Organism	Pieris rapae(cabbage white)

mRNA and Protein(s)

mRNA	Protein	Name
XM_022260860.1	XP_022116552.1	DDB1- and CUL4-associated factor 5

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Genomic adaptation to agricultural environments: cabbage white butterflies (Pieris rapae) as a case study.
Sikkink KL, Kobiela ME, Snell-Rood EC
BMC genomics18(1)412(2017 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC110994307 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC110994307 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPi78832	XM_022260860.1 Latest version!	Pieris rapae DDB1- and CUL4-associated factor 5 (LOC110994307), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC110994307 ( XM_022260860.1 ) cDNA ORF clone, Pieris rapae(cabbage white) -> XP_022116552.1 Pieris rapae DDB1- and CUL4-associated factor 5 (LOC110994307), mRNA.

Price & Availability↑

CloneID	OPi78832
Clone ID Related Accession (Same CDS sequence)	XM_022260860.1
Accession Version	XM_022260860.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2430bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-08-09
Organism	Pieris rapae(cabbage white)
Product	DDB1- and CUL4-associated factor 5
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_019093280.1) and transcript sequence (GFMO01012730.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pieris rapae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 245 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGTCTCGAT CTCTCAGTTG TGATGAAAAT GGTGGTATTG GTTTAAATAT GGCGAATATT 
GCATGTCCTC TACCATATAT TTCTAAGAGG GAATATGGTC AGATATCAGA TATTAAGTCT 
CATTTGTTTA ATAAAAGACT TCTCGCAGCT AAAAACTTGT ATCGCCGTGA TCTAGTGTGT 
CATTTTGGCT GTGTTAATGC GATTGAATTT TCCAGCAATG GCGAGTTGCT TGTATCAGGT 
GGAGATGATA GACGCGTTAT GCTTTGGCAA TTTGGGCAGA CTCTCCTACA TTATGGAAAA 
CCAGAAGCAA TGAAAGCTCT ACATCAATCA AATATATTTT GCCTAGGCAT CACATCTGAC 
AATCAAAAAA TATATTCTGG AGGAAATGAT GATATAGTGA TTGTACATGA TTTAGAATGC 
AAATGCCCTA TGGAAGTACT ACAGCATCAA AGAGCTGTAT GCAGTTTAAG TATTGACCCT 
TTCAATGAGA AAGTTATTTC AACAGCTGGA AATGATGGCC GCCTGCTTCT GTTTGACACT 
AGACAGTCGG TTCACGAGTC GTTAGTTATC GCTCGCAGCG TAAAAGCTTT CCACGGTGTG 
ATGTTTCACC CCCAACAGGT CGGCATTCTT GTATCTGCCA ATGCACGGGA TGGGGTTGCA 
CTGTGGGATT TAAGGTCGCC AAAACACCCG GTTCTCCGCT ACGGGGGTAA ACACTCGTGT 
CAGAATAGTA TGAGTGTGCG TTTCAACCAA GCTGGCACAC ACATTCTCGC CTTACGCCGA 
CGTATGGCGC CAGTACTATA CGCGGTACAG GCTCCCGAGC CGGTGGCGGA GTTCTATCAT 
CAGGATTATT ACAATTCGTG TACGATGAAG AGCTGTTGCT TCGCGGGGAA AGGCGATGAG 
TATGTGCTCT CCGGATCTGA TGATTTTAAT TTGTATATGT GGAAGATACC GGATACAGGG 
GGCGGAACTG ATACAGCGGT GGAGTTGCCG CATATAGTGT TATATGGTCA CAGATCAATC 
GTGAACCAGG TCCGATATAA CAACCACTAT TGTCTCATTG CTTCATCAGG AGTTGAGAAA 
ATTATTAAAG TTTGGTCGGC GTTAGAGTAT CCAGAAATGC GGGGAACATT ATTGGAAGAG 
GCCCAGGGGT CGGACAATCC GAGGGAGATA TACAGCCATG AGGATTATGT CTCCCTGGTA 
CATCACAGCG GACAGTCGAT ATCCCACAAC TATGCGGAAC AATCGACAAG CGAAGATCCC 
CGTATGATGG CATTCTTCGA TTCCCTTGTT CAACGTGAGC TTGAATGTCT GGCTGAGGAG 
ACTGACTCGT TGGACGGATC CAGTTCAGCA TCACGAGCCG CCCATGACTC TGATTCAAGC 
ACGGATCATA TTGTCGTCGA TCTTTTACCC TTGCCGCCTA AGAGAGCGTC CCAAAATGGC 
AGTAGGAGTT TGCGTTGTCC TAACCGGCTG GCGCGTTTGG TTGCAACGCG GTATCCTAAA 
AATTCCAGAG CCCAAAAGAG AGGATCGCTA AGGCGAGATA AGCAGTCCCG CCCATGCGTG 
AGCAAGACAG GCAAGAGTAT ATCGGGGGCA AGTTGTAAGG GCAAACGGGC AGCTCGGCGT 
GTGCGCGGTA TACGTCGGCC CGTGACGCGT ACGCTGGCGC CGCGTACACG TATATCAGCG 
CCATCTAGTG AAAGAACTGA TTCAGATGAA CCCACCCATT CTATGTTTAG GAATTCTGGG 
CGGATTATAC GACCACTACG CAGACGCCTT AGTTTAACTA GATCTTCAAA AAGAAAAAGT 
AAAGTCAATA GTTTTAGGAA GTCAGTATTA AGAAATAATG GTACAACGAC ACAAGACAGC 
AGTGACAATA ATATTTTTTC TAATTTCGAT GATAATCTAG CAGTACCGAG TACAAGTACT 
GGTTACAGAG GCCAAAACTC GGCACTATTT CGAATAGCTG AAGTAGACTC TGATGATGAC 
CAGTCAGCGA GCAGTAGACC AATATCCCCA AGGAACCAGA ATAATATTCC CACCAACTTA 
GTAAGCATTA TCCCCACGCC GATTAATGGT TCTAGAGATT CCTTAGGAGA CTCTTTAAAT 
GTTGAACCTC CATCTCCCCA CGAAATACGT AGAATCAATC CAAGGAGATC AAGACGGAAC 
GGCAGACAGC TTCAAAGGTC AGATTCCAGT GAATCACCTC CCCCTAAAGA GTTATCTATA 
CCCACGTCTC CCCCAGGTTA CAATAGAACA CTTGCCAGAT TGATGAATGA AACGAATGAG 
AGTGAGTTAG AGAGCAGTTG CTCCACAGAA AGTAATCTTT GGCCGGCTCC AAGTGTGAAT 
GAATCGGATA ATCAAATAGT CAAATTCAGG CAGCGTGTGA AAAAGCCGCG GAGGAATTTT 
AGGAGTCACA TGGATTCTGA CTCAAATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_022116552.1
CDS	35..2464
Translation	MSRSLSCDENGGIGLNMANIACPLPYISKREYGQISDIKSHLFNKRLLAAKNLYRRDLVCHFGCVNAIEFSSNGELLVSGGDDRRVMLWQFGQTLLHYGKPEAMKALHQSNIFCLGITSDNQKIYSGGNDDIVIVHDLECKCPMEVLQHQRAVCSLSIDPFNEKVISTAGNDGRLLLFDTRQSVHESLVIARSVKAFHGVMFHPQQVGILVSANARDGVALWDLRSPKHPVLRYGGKHSCQNSMSVRFNQAGTHILALRRRMAPVLYAVQAPEPVAEFYHQDYYNSCTMKSCCFAGKGDEYVLSGSDDFNLYMWKIPDTGGGTDTAVELPHIVLYGHRSIVNQVRYNNHYCLIASSGVEKIIKVWSALEYPEMRGTLLEEAQGSDNPREIYSHEDYVSLVHHSGQSISHNYAEQSTSEDPRMMAFFDSLVQRELECLAEETDSLDGSSSASRAAHDSDSSTDHIVVDLLPLPPKRASQNGSRSLRCPNRLARLVATRYPKNSRAQKRGSLRRDKQSRPCVSKTGKSISGASCKGKRAARRVRGIRRPVTRTLAPRTRISAPSSERTDSDEPTHSMFRNSGRIIRPLRRRLSLTRSSKRKSKVNSFRKSVLRNNGTTTQDSSDNNIFSNFDDNLAVPSTSTGYRGQNSALFRIAEVDSDDDQSASSRPISPRNQNNIPTNLVSIIPTPINGSRDSLGDSLNVEPPSPHEIRRINPRRSRRNGRQLQRSDSSESPPPKELSIPTSPPGYNRTLARLMNETNESELESSCSTESNLWPAPSVNESDNQIVKFRQRVKKPRRNFRSHMDSDSN

Target ORF information:

RefSeq Version	XM_022260860.1
Organism	Pieris rapae(cabbage white)
Definition	Pieris rapae DDB1- and CUL4-associated factor 5 (LOC110994307), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_022260860.1

ORF Insert Sequence:

ATGTCTCGAT CTCTCAGTTG TGATGAAAAT GGTGGTATTG GTTTAAATAT GGCGAATATT 
GCATGTCCTC TACCATATAT TTCTAAGAGG GAATATGGTC AGATATCAGA TATTAAGTCT 
CATTTGTTTA ATAAAAGACT TCTCGCAGCT AAAAACTTGT ATCGCCGTGA TCTAGTGTGT 
CATTTTGGCT GTGTTAATGC GATTGAATTT TCCAGCAATG GCGAGTTGCT TGTATCAGGT 
GGAGATGATA GACGCGTTAT GCTTTGGCAA TTTGGGCAGA CTCTCCTACA TTATGGAAAA 
CCAGAAGCAA TGAAAGCTCT ACATCAATCA AATATATTTT GCCTAGGCAT CACATCTGAC 
AATCAAAAAA TATATTCTGG AGGAAATGAT GATATAGTGA TTGTACATGA TTTAGAATGC 
AAATGCCCTA TGGAAGTACT ACAGCATCAA AGAGCTGTAT GCAGTTTAAG TATTGACCCT 
TTCAATGAGA AAGTTATTTC AACAGCTGGA AATGATGGCC GCCTGCTTCT GTTTGACACT 
AGACAGTCGG TTCACGAGTC GTTAGTTATC GCTCGCAGCG TAAAAGCTTT CCACGGTGTG 
ATGTTTCACC CCCAACAGGT CGGCATTCTT GTATCTGCCA ATGCACGGGA TGGGGTTGCA 
CTGTGGGATT TAAGGTCGCC AAAACACCCG GTTCTCCGCT ACGGGGGTAA ACACTCGTGT 
CAGAATAGTA TGAGTGTGCG TTTCAACCAA GCTGGCACAC ACATTCTCGC CTTACGCCGA 
CGTATGGCGC CAGTACTATA CGCGGTACAG GCTCCCGAGC CGGTGGCGGA GTTCTATCAT 
CAGGATTATT ACAATTCGTG TACGATGAAG AGCTGTTGCT TCGCGGGGAA AGGCGATGAG 
TATGTGCTCT CCGGATCTGA TGATTTTAAT TTGTATATGT GGAAGATACC GGATACAGGG 
GGCGGAACTG ATACAGCGGT GGAGTTGCCG CATATAGTGT TATATGGTCA CAGATCAATC 
GTGAACCAGG TCCGATATAA CAACCACTAT TGTCTCATTG CTTCATCAGG AGTTGAGAAA 
ATTATTAAAG TTTGGTCGGC GTTAGAGTAT CCAGAAATGC GGGGAACATT ATTGGAAGAG 
GCCCAGGGGT CGGACAATCC GAGGGAGATA TACAGCCATG AGGATTATGT CTCCCTGGTA 
CATCACAGCG GACAGTCGAT ATCCCACAAC TATGCGGAAC AATCGACAAG CGAAGATCCC 
CGTATGATGG CATTCTTCGA TTCCCTTGTT CAACGTGAGC TTGAATGTCT GGCTGAGGAG 
ACTGACTCGT TGGACGGATC CAGTTCAGCA TCACGAGCCG CCCATGACTC TGATTCAAGC 
ACGGATCATA TTGTCGTCGA TCTTTTACCC TTGCCGCCTA AGAGAGCGTC CCAAAATGGC 
AGTAGGAGTT TGCGTTGTCC TAACCGGCTG GCGCGTTTGG TTGCAACGCG GTATCCTAAA 
AATTCCAGAG CCCAAAAGAG AGGATCGCTA AGGCGAGATA AGCAGTCCCG CCCATGCGTG 
AGCAAGACAG GCAAGAGTAT ATCGGGGGCA AGTTGTAAGG GCAAACGGGC AGCTCGGCGT 
GTGCGCGGTA TACGTCGGCC CGTGACGCGT ACGCTGGCGC CGCGTACACG TATATCAGCG 
CCATCTAGTG AAAGAACTGA TTCAGATGAA CCCACCCATT CTATGTTTAG GAATTCTGGG 
CGGATTATAC GACCACTACG CAGACGCCTT AGTTTAACTA GATCTTCAAA AAGAAAAAGT 
AAAGTCAATA GTTTTAGGAA GTCAGTATTA AGAAATAATG GTACAACGAC ACAAGACAGC 
AGTGACAATA ATATTTTTTC TAATTTCGAT GATAATCTAG CAGTACCGAG TACAAGTACT 
GGTTACAGAG GCCAAAACTC GGCACTATTT CGAATAGCTG AAGTAGACTC TGATGATGAC 
CAGTCAGCGA GCAGTAGACC AATATCCCCA AGGAACCAGA ATAATATTCC CACCAACTTA 
GTAAGCATTA TCCCCACGCC GATTAATGGT TCTAGAGATT CCTTAGGAGA CTCTTTAAAT 
GTTGAACCTC CATCTCCCCA CGAAATACGT AGAATCAATC CAAGGAGATC AAGACGGAAC 
GGCAGACAGC TTCAAAGGTC AGATTCCAGT GAATCACCTC CCCCTAAAGA GTTATCTATA 
CCCACGTCTC CCCCAGGTTA CAATAGAACA CTTGCCAGAT TGATGAATGA AACGAATGAG 
AGTGAGTTAG AGAGCAGTTG CTCCACAGAA AGTAATCTTT GGCCGGCTCC AAGTGTGAAT 
GAATCGGATA ATCAAATAGT CAAATTCAGG CAGCGTGTGA AAAAGCCGCG GAGGAATTTT 
AGGAGTCACA TGGATTCTGA CTCAAATTAA