UPF3B cDNA ORF clone, Orcinus orca(killer whale)

Gene
Clones
gRNAs

Summary

Gene Symbol	UPF3B
Entrez Gene ID	101278912
Full Name	UPF3B, regulator of nonsense mediated mRNA decay
Gene Type	protein-coding
Organism	Orcinus orca(killer whale)

mRNA and Protein(s)

mRNA	Protein	Name
XM_004275822.2	XP_004275870.1	regulator of nonsense transcripts 3B isoform X2
XM_004275821.2	XP_004275869.1	regulator of nonsense transcripts 3B isoform X1

Pathways from BioSystems
Gene Ontology

The following UPF3B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the UPF3B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OOr155713	XM_004275821.2 Latest version!	Orcinus orca UPF3 regulator of nonsense transcripts homolog B (yeast) (UPF3B), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OOr155714	XM_004275822.2 Latest version!	Orcinus orca UPF3 regulator of nonsense transcripts homolog B (yeast) (UPF3B), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

UPF3B ( XM_004275821.2 ) cDNA ORF clone, Orcinus orca(killer whale) -> XP_004275869.1 Orcinus orca UPF3 regulator of nonsense transcripts homolog B (yeast) (UPF3B), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OOr155713
Clone ID Related Accession (Same CDS sequence)	XM_004275821.2
Accession Version	XM_004275821.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1473bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-05-14
Organism	Orcinus orca(killer whale)
Product	regulator of nonsense transcripts 3B isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004438487.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On May 15, 2015 this sequence version replaced XM_004275821.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Orcinus orca Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAGGAGCG AAACCGTGGC CATGAAGGAG GAGAAGGAGC ATAGGCCTAA GGAGAAGCGA 
GTAACCCTCT TGACTCCCCC GGGGGCCACA GGCAGCGTCT GTGGGCCTTC GGGGGACAGC 
ATCAAAGCGG AAGATAAGCA GGATCGGAAC AAGGAGAAGA AAGAGGCGTT GAGCAAGGTG 
GTAATACGGA GATTACCGCC CACTTTGACC AAGGAGCAGC TTCAGGAACA TCTTCAGCCT 
ATGCCTGAGC ATGATTATTT TGAGTTTTTT TCTAATGATA CTAGCCTGTA TCCTCATATG 
TATGCCAGAG CATACATCAA CTTTAAAAAC CAGGAGGACA TTATTTTGTT CAGGGATCGT 
TTCGATGGTT ATGTGTTCCT CGACAATAAA GGTCAGGAAT ATCCTGCCAT AGTAGAATTT 
GCACCTTTTC AAAAAGCTGC AAAAAAGAAG ACTAAGAAAA GAGATACTAA AGTTGGGACT 
ATCGATGATG ATCCAGAATA TAGAAAATTT TTGGAAAGTT ATGCTGCAGA TAATGAGAAA 
ATGACATCTA CTCCAGAGAC ACTGCTAGAG GAAATAGAAG CAAAAAATAG AGAATTAATA 
GCTAAAAAGA CAACCCCACT TTTGAGCTTC CTGAAAAACA AGCAGAGGAT GAGAGAAGAA 
AAGAGAGAAG AAAGAAGGAG GCGAGAAATA GAAAGAAAAA GACAAAGAGA AGAAGAGAGG 
AGGAAGTGGA AAGAAGAAGA GAAACGAAAA AGGAAAGATA TAGAAAAGCT AAAGAAGATA 
GACAGAGTTC CAGAAAGGGA CAAATTAAAG GATGAACCAA AGATTAAGGT ACACAGGTTT 
CTGTTACAAG CTGTGAATCA GAAAAATCTG CTCAAGAAGC CAGAAAAAGG CGATGAAAAA 
GAAGTGGACA AAAGAGAAAA GGTCAAGAAA TTGGACAAAG AGAATCTGAG TGATGAAAGA 
GCCAGTGGGC AGAGTTGTCC ATTGCCCAAA CGTTCTGATG GTGAATTTAA AGATGAAAAG 
CCTAAGAGAC CTGAAGATGA GAGTGGCAGA GAATACAGGG AGAGGGAGCG GGATTATGAA 
CGAGACCAAG AGCGCGCCCT GCGGGAAAGA GAGAGGCTGA AGCGGCAGGA GGAAGAGCGC 
CGCAGGCAGA AGGAGCGCTA CGAGAAAGAG AAGGCTTTTA AAAGAAAGGA AGAAGAAATG 
AAAAAAGAGA AAGAAGCCCT TCGGGATAAA GGAAAGAAGC CTGAAAGTAC AGAACCAGTA 
GGCAGCTCAG AAAAAACTGA AAAGAAAGAA GAAGTGGTTA AGAGAGATCG CATAAGAAAC 
AAGGATCGCC CAGCAATGCA GCTTTACCAA CCAGGAGCTC GAAGCCGAAA TCGACTCTGT 
CCCCATGATG ACAGCACCAA GTCTGGAGAT TCAACCATAG AAAAAAAGCA GGAAAGTGGT 
ATTAGCCATA GAAAAGAAGG AAGCGAGGAG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_004275869.1
CDS	51..1523
Translation	MRSETVAMKEEKEHRPKEKRVTLLTPPGATGSVCGPSGDSIKAEDKQDRNKEKKEALSKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPETLLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEEKRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKEVDKREKVKKLDKENLSDERASGQSCPLPKRSDGEFKDEKPKRPEDESGREYRERERDYERDQERALRERERLKRQEEERRRQKERYEKEKAFKRKEEEMKKEKEALRDKGKKPESTEPVGSSEKTEKKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPHDDSTKSGDSTIEKKQESGISHRKEGSEE

Target ORF information:

RefSeq Version	XM_004275821.2
Organism	Orcinus orca(killer whale)
Definition	Orcinus orca UPF3 regulator of nonsense transcripts homolog B (yeast) (UPF3B), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_004275821.2

ORF Insert Sequence:

ATGAGGAGCG AAACCGTGGC CATGAAGGAG GAGAAGGAGC ATAGGCCTAA GGAGAAGCGA 
GTAACCCTCT TGACTCCCCC GGGGGCCACA GGCAGCGTCT GTGGGCCTTC GGGGGACAGC 
ATCAAAGCGG AAGATAAGCA GGATCGGAAC AAGGAGAAGA AAGAGGCGTT GAGCAAGGTG 
GTAATACGGA GATTACCGCC CACTTTGACC AAGGAGCAGC TTCAGGAACA TCTTCAGCCT 
ATGCCTGAGC ATGATTATTT TGAGTTTTTT TCTAATGATA CTAGCCTGTA TCCTCATATG 
TATGCCAGAG CATACATCAA CTTTAAAAAC CAGGAGGACA TTATTTTGTT CAGGGATCGT 
TTCGATGGTT ATGTGTTCCT CGACAATAAA GGTCAGGAAT ATCCTGCCAT AGTAGAATTT 
GCACCTTTTC AAAAAGCTGC AAAAAAGAAG ACTAAGAAAA GAGATACTAA AGTTGGGACT 
ATCGATGATG ATCCAGAATA TAGAAAATTT TTGGAAAGTT ATGCTGCAGA TAATGAGAAA 
ATGACATCTA CTCCAGAGAC ACTGCTAGAG GAAATAGAAG CAAAAAATAG AGAATTAATA 
GCTAAAAAGA CAACCCCACT TTTGAGCTTC CTGAAAAACA AGCAGAGGAT GAGAGAAGAA 
AAGAGAGAAG AAAGAAGGAG GCGAGAAATA GAAAGAAAAA GACAAAGAGA AGAAGAGAGG 
AGGAAGTGGA AAGAAGAAGA GAAACGAAAA AGGAAAGATA TAGAAAAGCT AAAGAAGATA 
GACAGAGTTC CAGAAAGGGA CAAATTAAAG GATGAACCAA AGATTAAGGT ACACAGGTTT 
CTGTTACAAG CTGTGAATCA GAAAAATCTG CTCAAGAAGC CAGAAAAAGG CGATGAAAAA 
GAAGTGGACA AAAGAGAAAA GGTCAAGAAA TTGGACAAAG AGAATCTGAG TGATGAAAGA 
GCCAGTGGGC AGAGTTGTCC ATTGCCCAAA CGTTCTGATG GTGAATTTAA AGATGAAAAG 
CCTAAGAGAC CTGAAGATGA GAGTGGCAGA GAATACAGGG AGAGGGAGCG GGATTATGAA 
CGAGACCAAG AGCGCGCCCT GCGGGAAAGA GAGAGGCTGA AGCGGCAGGA GGAAGAGCGC 
CGCAGGCAGA AGGAGCGCTA CGAGAAAGAG AAGGCTTTTA AAAGAAAGGA AGAAGAAATG 
AAAAAAGAGA AAGAAGCCCT TCGGGATAAA GGAAAGAAGC CTGAAAGTAC AGAACCAGTA 
GGCAGCTCAG AAAAAACTGA AAAGAAAGAA GAAGTGGTTA AGAGAGATCG CATAAGAAAC 
AAGGATCGCC CAGCAATGCA GCTTTACCAA CCAGGAGCTC GAAGCCGAAA TCGACTCTGT 
CCCCATGATG ACAGCACCAA GTCTGGAGAT TCAACCATAG AAAAAAAGCA GGAAAGTGGT 
ATTAGCCATA GAAAAGAAGG AAGCGAGGAG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

UPF3B ( XM_004275822.2 ) cDNA ORF clone, Orcinus orca(killer whale) -> XP_004275870.1 Orcinus orca UPF3 regulator of nonsense transcripts homolog B (yeast) (UPF3B), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OOr155714
Clone ID Related Accession (Same CDS sequence)	XM_004275822.2
Accession Version	XM_004275822.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1434bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-05-14
Organism	Orcinus orca(killer whale)
Product	regulator of nonsense transcripts 3B isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004438487.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 15, 2015 this sequence version replaced XM_004275822.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Orcinus orca Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAGGAGCG AAACCGTGGC CATGAAGGAG GAGAAGGAGC ATAGGCCTAA GGAGAAGCGA 
GTAACCCTCT TGACTCCCCC GGGGGCCACA GGCAGCGTCT GTGGGCCTTC GGGGGACAGC 
ATCAAAGCGG AAGATAAGCA GGATCGGAAC AAGGAGAAGA AAGAGGCGTT GAGCAAGGTG 
GTAATACGGA GATTACCGCC CACTTTGACC AAGGAGCAGC TTCAGGAACA TCTTCAGCCT 
ATGCCTGAGC ATGATTATTT TGAGTTTTTT TCTAATGATA CTAGCCTGTA TCCTCATATG 
TATGCCAGAG CATACATCAA CTTTAAAAAC CAGGAGGACA TTATTTTGTT CAGGGATCGT 
TTCGATGGTT ATGTGTTCCT CGACAATAAA GGTCAGGAAT ATCCTGCCAT AGTAGAATTT 
GCACCTTTTC AAAAAGCTGC AAAAAAGAAG ACTAAGAAAA GAGATACTAA AGTTGGGACT 
ATCGATGATG ATCCAGAATA TAGAAAATTT TTGGAAAGTT ATGCTGCAGA TAATGAGAAA 
ATGACATCTA CTCCAGAGAC ACTGCTAGAG GAAATAGAAG CAAAAAATAG AGAATTAATA 
GCTAAAAAGA CAACCCCACT TTTGAGCTTC CTGAAAAACA AGCAGAGGAT GAGAGAAGAA 
AAGAGAGAAG AAAGAAGGAG GCGAGAAATA GAAAGAAAAA GACAAAGAGA AGAAGAGAGG 
AGGAAGTGGA AAGAAGAAGA GAAACGAAAA AGGAAAGATA TAGAAAAGCT AAAGAAGATA 
GACAGAGTTC CAGAAAGGGA CAAATTAAAG GATGAACCAA AGATTAAGCT GCTCAAGAAG 
CCAGAAAAAG GCGATGAAAA AGAAGTGGAC AAAAGAGAAA AGGTCAAGAA ATTGGACAAA 
GAGAATCTGA GTGATGAAAG AGCCAGTGGG CAGAGTTGTC CATTGCCCAA ACGTTCTGAT 
GGTGAATTTA AAGATGAAAA GCCTAAGAGA CCTGAAGATG AGAGTGGCAG AGAATACAGG 
GAGAGGGAGC GGGATTATGA ACGAGACCAA GAGCGCGCCC TGCGGGAAAG AGAGAGGCTG 
AAGCGGCAGG AGGAAGAGCG CCGCAGGCAG AAGGAGCGCT ACGAGAAAGA GAAGGCTTTT 
AAAAGAAAGG AAGAAGAAAT GAAAAAAGAG AAAGAAGCCC TTCGGGATAA AGGAAAGAAG 
CCTGAAAGTA CAGAACCAGT AGGCAGCTCA GAAAAAACTG AAAAGAAAGA AGAAGTGGTT 
AAGAGAGATC GCATAAGAAA CAAGGATCGC CCAGCAATGC AGCTTTACCA ACCAGGAGCT 
CGAAGCCGAA ATCGACTCTG TCCCCATGAT GACAGCACCA AGTCTGGAGA TTCAACCATA 
GAAAAAAAGC AGGAAAGTGG TATTAGCCAT AGAAAAGAAG GAAGCGAGGA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_004275870.1
CDS	42..1475
Translation	MRSETVAMKEEKEHRPKEKRVTLLTPPGATGSVCGPSGDSIKAEDKQDRNKEKKEALSKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPETLLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEEKRKRKDIEKLKKIDRVPERDKLKDEPKIKLLKKPEKGDEKEVDKREKVKKLDKENLSDERASGQSCPLPKRSDGEFKDEKPKRPEDESGREYRERERDYERDQERALRERERLKRQEEERRRQKERYEKEKAFKRKEEEMKKEKEALRDKGKKPESTEPVGSSEKTEKKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPHDDSTKSGDSTIEKKQESGISHRKEGSEE

Target ORF information:

RefSeq Version	XM_004275822.2
Organism	Orcinus orca(killer whale)
Definition	Orcinus orca UPF3 regulator of nonsense transcripts homolog B (yeast) (UPF3B), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_004275822.2

ORF Insert Sequence:

ATGAGGAGCG AAACCGTGGC CATGAAGGAG GAGAAGGAGC ATAGGCCTAA GGAGAAGCGA 
GTAACCCTCT TGACTCCCCC GGGGGCCACA GGCAGCGTCT GTGGGCCTTC GGGGGACAGC 
ATCAAAGCGG AAGATAAGCA GGATCGGAAC AAGGAGAAGA AAGAGGCGTT GAGCAAGGTG 
GTAATACGGA GATTACCGCC CACTTTGACC AAGGAGCAGC TTCAGGAACA TCTTCAGCCT 
ATGCCTGAGC ATGATTATTT TGAGTTTTTT TCTAATGATA CTAGCCTGTA TCCTCATATG 
TATGCCAGAG CATACATCAA CTTTAAAAAC CAGGAGGACA TTATTTTGTT CAGGGATCGT 
TTCGATGGTT ATGTGTTCCT CGACAATAAA GGTCAGGAAT ATCCTGCCAT AGTAGAATTT 
GCACCTTTTC AAAAAGCTGC AAAAAAGAAG ACTAAGAAAA GAGATACTAA AGTTGGGACT 
ATCGATGATG ATCCAGAATA TAGAAAATTT TTGGAAAGTT ATGCTGCAGA TAATGAGAAA 
ATGACATCTA CTCCAGAGAC ACTGCTAGAG GAAATAGAAG CAAAAAATAG AGAATTAATA 
GCTAAAAAGA CAACCCCACT TTTGAGCTTC CTGAAAAACA AGCAGAGGAT GAGAGAAGAA 
AAGAGAGAAG AAAGAAGGAG GCGAGAAATA GAAAGAAAAA GACAAAGAGA AGAAGAGAGG 
AGGAAGTGGA AAGAAGAAGA GAAACGAAAA AGGAAAGATA TAGAAAAGCT AAAGAAGATA 
GACAGAGTTC CAGAAAGGGA CAAATTAAAG GATGAACCAA AGATTAAGCT GCTCAAGAAG 
CCAGAAAAAG GCGATGAAAA AGAAGTGGAC AAAAGAGAAA AGGTCAAGAA ATTGGACAAA 
GAGAATCTGA GTGATGAAAG AGCCAGTGGG CAGAGTTGTC CATTGCCCAA ACGTTCTGAT 
GGTGAATTTA AAGATGAAAA GCCTAAGAGA CCTGAAGATG AGAGTGGCAG AGAATACAGG 
GAGAGGGAGC GGGATTATGA ACGAGACCAA GAGCGCGCCC TGCGGGAAAG AGAGAGGCTG 
AAGCGGCAGG AGGAAGAGCG CCGCAGGCAG AAGGAGCGCT ACGAGAAAGA GAAGGCTTTT 
AAAAGAAAGG AAGAAGAAAT GAAAAAAGAG AAAGAAGCCC TTCGGGATAA AGGAAAGAAG 
CCTGAAAGTA CAGAACCAGT AGGCAGCTCA GAAAAAACTG AAAAGAAAGA AGAAGTGGTT 
AAGAGAGATC GCATAAGAAA CAAGGATCGC CCAGCAATGC AGCTTTACCA ACCAGGAGCT 
CGAAGCCGAA ATCGACTCTG TCCCCATGAT GACAGCACCA AGTCTGGAGA TTCAACCATA 
GAAAAAAAGC AGGAAAGTGG TATTAGCCAT AGAAAAGAAG GAAGCGAGGA GTGA