Pcdhb17 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Pcdhb17
Entrez Gene ID	93888
Full Name	protocadherin beta 17
Synonyms	Pcdhb16,PcdhbQ,mKIAA1621
General protein information	Preferred Names protocadherin beta 17 Names protocadherin beta-16
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 18 Map Location: 18\|18 B3

mRNA and Protein(s)

mRNA	Protein	Name
NM_053142.3	NP_444372.2	protocadherin beta-16 precursor

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	PCDHB16	NP_001013028.2
Bos taurus (cattle)	PCDHB16	XP_003586351.1
	PCDHB16	XP_001091535.1
Mus musculus (house mouse)	Pcdhb17	NP_444372.2
Homo sapiens (human)	PCDHB16	NP_066008.1
Canis lupus familiaris (dog)	PCDHB8	XP_005617355.1

Gene Ontology
Bibliography

Related articles in PubMed

Snf2h-mediated chromatin organization and histone H1 dynamics govern cerebellar morphogenesis and neural maturation.
Alvarez-Saavedra M, De Repentigny Y, Lagali PS, Raghu Ram EV, Yan K, Hashem E, Ivanochko D, Huh MS, Yang D, Mears AJ, Todd MA, Corcoran CP, Bassett EA, Tokarew NJ, Kokavec J, Majumder R, Ioshikhes I, Wallace VA, Kothary R, Meshorer E, Stopka T, Skoultchi AI, Picketts DJ
Nature communications54181(2014 Jun)

Reduction of Nipbl impairs cohesin loading locally and affects transcription but not cohesion-dependent functions in a mouse model of Cornelia de Lange Syndrome.
Remeseiro S, Cuadrado A, Kawauchi S, Calof AL, Lander AD, Losada A
Biochimica et biophysica acta1832(12)2097-102(2013 Dec)

Epigenetic functions of smchd1 repress gene clusters on the inactive X chromosome and on autosomes.
Gendrel AV, Tang YA, Suzuki M, Godwin J, Nesterova TB, Greally JM, Heard E, Brockdorff N
Molecular and cellular biology33(16)3150-65(2013 Aug)

A unique role of cohesin-SA1 in gene regulation and development.
Remeseiro S, Cuadrado A, G?mez-L?pez G, Pisano DG, Losada A
The EMBO journal31(9)2090-102(2012 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Pcdhb17 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pcdhb17 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMu24953	NM_053142.3 Latest version!	Mus musculus protocadherin beta 17 (Pcdhb17), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$468.30 $669.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Pcdhb17 ( NM_053142.3 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_444372.2 Mus musculus protocadherin beta 17 (Pcdhb17), mRNA.

Price & Availability↑

CloneID	OMu24953
Clone ID Related Accession (Same CDS sequence)	NM_053142.3
Accession Version	NM_053142.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2400bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-10
Organism	Mus musculus(house mouse)
Product	protocadherin beta-16 precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC017149.1. On Jun 8, 2007 this sequence version replaced NM_053142.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript is intronless :: BC017149.1 [ECO:0000345] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGAGACTG CATGGATGTG CAATCTGAGA CAAAGGCAAG TCCTGGCTTT CTTTGTTTTG 
CTGCATGTGT CAGGGGCAGG GGCAGAACTG GGCCCCTATT CCATAGAGGA AGAAACAGAG 
AGGGGCTCCT TTGTGGCAAA TCTTGGGAAA GATCTGGGGG TGGACCTGGC AGAGATATCC 
AATCGCAGGG CTCGGATCAT TTCCCAAGAA AACAAAGAGC ATTTGCAGCT CAACCTTCAA 
TCTGGAGATC TGCTCATAAA TGAGAAACTG GACCGAGAGG AGCTATGTGG CCCCATTGAG 
CCGTGTGTTC TACACTTCCA AGTGTTAATG GAAAACCCTT TAGAGGTATT TCAGGCTGAA 
CTGAGGGTGA TGGACATAAA TGACTATTCT CCGGTGTTCA GTGAAAGAGA AATGATACTG 
AGAATACTAG AAAACAGTGC TCTGGGAGAT ACATTTCCTT TAAATAATGC TCTGGACTCA 
GACGTAGCAA TCAACAATAT CCAGACCTAT AGGCTCAGCT CAAACTCTCA TTTCCTGGTT 
GTAACCCGCA ACCGCAGTGA TGGCAGGAAG TACCCAGAGC TGGTGCTGGA GAAAGAACTG 
GATCGAGAGG AGGAACCTGA GCTGAGGTTA ACTCTGACAG CTTTGGATGG TGGCGCTCCT 
CCCCGGTCTG GGACGGCACA GGTTCTCATT GAAGTAGTGG ACATCAACGA TAATGCACCC 
AAGTTTCAGC AGCCAACATA CCGAGTGCAA ATTCCCGAGA ACAGTCCCAC CGGTTCTCTG 
GTACTCACAG TCTCAGCCAA TGACTTGGAC AGTGGAGATT ATGGAAAAGT ATTGTATGCA 
CTTTCTCAGC CTTCAGAAGA TATTAGCAAA ACGTTAGAAG TAAACCCTGT AACCGGGGAG 
ATTCGGCTAC GAAAAGAGGT GGATTTTGAA ACTATTCCCT CTTATGAAGT GGATATCAAG 
GCCACGGATG GGGGAGGTCT CTCAGGAAAA TGCACGCTGT TACTGAAGGT GGTGGACGTG 
AATGACAATG CCCCAGAAGT GATGCTATCT GCTCTTACCA GCCCAGTCCC AGAAAACTCC 
CCGGACGAGG TAGTTGCTGT TTTCAGTGTT AAAGATCCTG ATTCAGCGAA CAATGGAAAA 
ATGATTGCCT CCATCGAAGA AGATCTTCCC TTTCTTCTAA AATCTTCAGG GAAGAACTTT 
TACACTTTAG TGACCAAGAG AGCACTTGAC AGGGAAGAAA GAGAGAAATA CAACATCACC 
ATCACTGTCT CTGACCTGGG CACACCCAGG CTCACAACCC AGCACACCAT AACAGTGCAG 
GTCTCTGACA CCAATGACAA CGCCCCCGCC TTCAACCAAA CCTCATACAC CCTGTTCGTC 
CGCGAGAACA ACAGCCCCGC CATGCACATA GGCACCATCA GTGCCACAGA CTCTGACGCT 
GGCTCCAATT CCCACATCAG CTACTCGCTG TTGCCTTCCC ACGACCCGCA GCTGGCCCTG 
GACTCGCTCA TCTCCATCAA CGCAGACAAT GGGCAGCTGT TCGCGCTCAG GGCGCTGGAC 
TATGAGGCCC TGCAGGCCTT TGAGTTCCAC GTGGGTGCAA TAGACCAAGG CTCACCTGCG 
CTCAGCAGCC AAGCGCTGGT GCGCGTGGTG GTGCTGGACG ACAATGACAA TGCGCCCTTC 
GTGCTCTACC CGATGCAGAA CTCCTCTGCG CCTTGCACAG AACTGCTGCC CAGGGCGGCG 
GAACCCGGAT ACCTGGTCAC CAAGGTGGTG GCTGTGGATC GCGACTCTGG CCAGAATGCC 
TGGCTGTCAT TCCAACTTCT CAAGGCTACG GAGCCCGGGC TGTTCAGCGT GTGGGCGCAC 
AATGGCGAGG TACGCACTAC CAGACTGCTG AGCGAGCGCG ATGTGCCCAA GCACAGGCTG 
GTCCTGCTGG TCAAGGACAA TGGCGATCCT CCGCGCTCTG CCAGCGTCAC GCTGCACGTG 
CTAGTGGTGG ATGGCTTCTC TCAGCCCTAC CTGCCTCTGC CAGAGGTGGC GCGCAATCCC 
GCGCACGATG AGGACGCTCT AACACTGTAT CTGGTCATAG CCTTGGCATC TGTGTCTTCT 
CTCTTCCTCT TGTCTGTGCT GCTGTTTGTG GGGGTGAGGC TGTGCAGGAG GGCCAGGTCG 
GCCTCTCTGA GTGGTTATTC CGTGCCTGAG GGCCACATTC CTGGCCATCT GGTGGATGTC 
AGAGGTGTGG GGACCCTGTC CCAGAGCTAC CAGTATGATG TATGTCTGAT GGGCGATTCT 
TCTGGGACCA GTGAGTTTAA CTTCTTAAAG CCAGTTTTCC CTAGCTCTCT AGACCAGTGC 
TCTGGTAAAG AAATAGAGGA AAATTCCTCA CTCCACAATA GTTTTGGATT TCATCATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_444372.2
CDS	139..2538
Translation	METAWMCNLRQRQVLAFFVLLHVSGAGAELGPYSIEEETERGSFVANLGKDLGVDLAEISNRRARIISQENKEHLQLNLQSGDLLINEKLDREELCGPIEPCVLHFQVLMENPLEVFQAELRVMDINDYSPVFSEREMILRILENSALGDTFPLNNALDSDVAINNIQTYRLSSNSHFLVVTRNRSDGRKYPELVLEKELDREEEPELRLTLTALDGGAPPRSGTAQVLIEVVDINDNAPKFQQPTYRVQIPENSPTGSLVLTVSANDLDSGDYGKVLYALSQPSEDISKTLEVNPVTGEIRLRKEVDFETIPSYEVDIKATDGGGLSGKCTLLLKVVDVNDNAPEVMLSALTSPVPENSPDEVVAVFSVKDPDSANNGKMIASIEEDLPFLLKSSGKNFYTLVTKRALDREEREKYNITITVSDLGTPRLTTQHTITVQVSDTNDNAPAFNQTSYTLFVRENNSPAMHIGTISATDSDAGSNSHISYSLLPSHDPQLALDSLISINADNGQLFALRALDYEALQAFEFHVGAIDQGSPALSSQALVRVVVLDDNDNAPFVLYPMQNSSAPCTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLVLLVKDNGDPPRSASVTLHVLVVDGFSQPYLPLPEVARNPAHDEDALTLYLVIALASVSSLFLLSVLLFVGVRLCRRARSASLSGYSVPEGHIPGHLVDVRGVGTLSQSYQYDVCLMGDSSGTSEFNFLKPVFPSSLDQCSGKEIEENSSLHNSFGFHH

Target ORF information:

RefSeq Version	NM_053142.3
Organism	Mus musculus(house mouse)
Definition	Mus musculus protocadherin beta 17 (Pcdhb17), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_053142.3

ORF Insert Sequence:

ATGGAGACTG CATGGATGTG CAATCTGAGA CAAAGGCAAG TCCTGGCTTT CTTTGTTTTG 
CTGCATGTGT CAGGGGCAGG GGCAGAACTG GGCCCCTATT CCATAGAGGA AGAAACAGAG 
AGGGGCTCCT TTGTGGCAAA TCTTGGGAAA GATCTGGGGG TGGACCTGGC AGAGATATCC 
AATCGCAGGG CTCGGATCAT TTCCCAAGAA AACAAAGAGC ATTTGCAGCT CAACCTTCAA 
TCTGGAGATC TGCTCATAAA TGAGAAACTG GACCGAGAGG AGCTATGTGG CCCCATTGAG 
CCGTGTGTTC TACACTTCCA AGTGTTAATG GAAAACCCTT TAGAGGTATT TCAGGCTGAA 
CTGAGGGTGA TGGACATAAA TGACTATTCT CCGGTGTTCA GTGAAAGAGA AATGATACTG 
AGAATACTAG AAAACAGTGC TCTGGGAGAT ACATTTCCTT TAAATAATGC TCTGGACTCA 
GACGTAGCAA TCAACAATAT CCAGACCTAT AGGCTCAGCT CAAACTCTCA TTTCCTGGTT 
GTAACCCGCA ACCGCAGTGA TGGCAGGAAG TACCCAGAGC TGGTGCTGGA GAAAGAACTG 
GATCGAGAGG AGGAACCTGA GCTGAGGTTA ACTCTGACAG CTTTGGATGG TGGCGCTCCT 
CCCCGGTCTG GGACGGCACA GGTTCTCATT GAAGTAGTGG ACATCAACGA TAATGCACCC 
AAGTTTCAGC AGCCAACATA CCGAGTGCAA ATTCCCGAGA ACAGTCCCAC CGGTTCTCTG 
GTACTCACAG TCTCAGCCAA TGACTTGGAC AGTGGAGATT ATGGAAAAGT ATTGTATGCA 
CTTTCTCAGC CTTCAGAAGA TATTAGCAAA ACGTTAGAAG TAAACCCTGT AACCGGGGAG 
ATTCGGCTAC GAAAAGAGGT GGATTTTGAA ACTATTCCCT CTTATGAAGT GGATATCAAG 
GCCACGGATG GGGGAGGTCT CTCAGGAAAA TGCACGCTGT TACTGAAGGT GGTGGACGTG 
AATGACAATG CCCCAGAAGT GATGCTATCT GCTCTTACCA GCCCAGTCCC AGAAAACTCC 
CCGGACGAGG TAGTTGCTGT TTTCAGTGTT AAAGATCCTG ATTCAGCGAA CAATGGAAAA 
ATGATTGCCT CCATCGAAGA AGATCTTCCC TTTCTTCTAA AATCTTCAGG GAAGAACTTT 
TACACTTTAG TGACCAAGAG AGCACTTGAC AGGGAAGAAA GAGAGAAATA CAACATCACC 
ATCACTGTCT CTGACCTGGG CACACCCAGG CTCACAACCC AGCACACCAT AACAGTGCAG 
GTCTCTGACA CCAATGACAA CGCCCCCGCC TTCAACCAAA CCTCATACAC CCTGTTCGTC 
CGCGAGAACA ACAGCCCCGC CATGCACATA GGCACCATCA GTGCCACAGA CTCTGACGCT 
GGCTCCAATT CCCACATCAG CTACTCGCTG TTGCCTTCCC ACGACCCGCA GCTGGCCCTG 
GACTCGCTCA TCTCCATCAA CGCAGACAAT GGGCAGCTGT TCGCGCTCAG GGCGCTGGAC 
TATGAGGCCC TGCAGGCCTT TGAGTTCCAC GTGGGTGCAA TAGACCAAGG CTCACCTGCG 
CTCAGCAGCC AAGCGCTGGT GCGCGTGGTG GTGCTGGACG ACAATGACAA TGCGCCCTTC 
GTGCTCTACC CGATGCAGAA CTCCTCTGCG CCTTGCACAG AACTGCTGCC CAGGGCGGCG 
GAACCCGGAT ACCTGGTCAC CAAGGTGGTG GCTGTGGATC GCGACTCTGG CCAGAATGCC 
TGGCTGTCAT TCCAACTTCT CAAGGCTACG GAGCCCGGGC TGTTCAGCGT GTGGGCGCAC 
AATGGCGAGG TACGCACTAC CAGACTGCTG AGCGAGCGCG ATGTGCCCAA GCACAGGCTG 
GTCCTGCTGG TCAAGGACAA TGGCGATCCT CCGCGCTCTG CCAGCGTCAC GCTGCACGTG 
CTAGTGGTGG ATGGCTTCTC TCAGCCCTAC CTGCCTCTGC CAGAGGTGGC GCGCAATCCC 
GCGCACGATG AGGACGCTCT AACACTGTAT CTGGTCATAG CCTTGGCATC TGTGTCTTCT 
CTCTTCCTCT TGTCTGTGCT GCTGTTTGTG GGGGTGAGGC TGTGCAGGAG GGCCAGGTCG 
GCCTCTCTGA GTGGTTATTC CGTGCCTGAG GGCCACATTC CTGGCCATCT GGTGGATGTC 
AGAGGTGTGG GGACCCTGTC CCAGAGCTAC CAGTATGATG TATGTCTGAT GGGCGATTCT 
TCTGGGACCA GTGAGTTTAA CTTCTTAAAG CCAGTTTTCC CTAGCTCTCT AGACCAGTGC 
TCTGGTAAAG AAATAGAGGA AAATTCCTCA CTCCACAATA GTTTTGGATT TCATCATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Snf2h-mediated chromatin organization and histone H1 dynamics govern cerebellar morphogenesis and neural maturation.
Nature communications54181(2014 Jun)
Alvarez-Saavedra M,De Repentigny Y,Lagali PS,Raghu Ram EV,Yan K,Hashem E,Ivanochko D,Huh MS,Yang D,Mears AJ,Todd MA,Corcoran CP,Bassett EA,Tokarew NJ,Kokavec J,Majumder R,Ioshikhes I,Wallace VA,Kothary R,Meshorer E,Stopka T,Skoultchi AI,Picketts DJ

Reduction of Nipbl impairs cohesin loading locally and affects transcription but not cohesion-dependent functions in a mouse model of Cornelia de Lange Syndrome.
Biochimica et biophysica acta1832(12)2097-102(2013 Dec)
Remeseiro S,Cuadrado A,Kawauchi S,Calof AL,Lander AD,Losada A

Epigenetic functions of smchd1 repress gene clusters on the inactive X chromosome and on autosomes.
Molecular and cellular biology33(16)3150-65(2013 Aug)
Gendrel AV,Tang YA,Suzuki M,Godwin J,Nesterova TB,Greally JM,Heard E,Brockdorff N

A unique role of cohesin-SA1 in gene regulation and development.
The EMBO journal31(9)2090-102(2012 May)
Remeseiro S,Cuadrado A,G?mez-L?pez G,Pisano DG,Losada A