Pcdha12 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Pcdha12
Entrez Gene ID	192164
Full Name	protocadherin alpha 12
Synonyms	Cnr5,Crnr5,Pcdha13
General protein information	Preferred Names protocadherin alpha 12 Names protocadherin alpha-12 cadherin-related neuronal receptor 5 protocadherin alpha 13
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 18 Map Location: 18\|18 B2-B3

mRNA and Protein(s)

mRNA	Protein	Name
NM_138663.2	NP_619604.1	protocadherin alpha-12 precursor

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Pcdha12	NP_619604.1
Homo sapiens (human)	PCDHA13	NP_061727.1
Bos taurus (cattle)	PCDHA13	NP_001095976.1
Rattus norvegicus (Norway rat)	Pcdha13	NP_446386.2

Gene Ontology
Bibliography

Related articles in PubMed

Developmental epigenetic modification regulates stochastic expression of clustered protocadherin genes, generating single neuron diversity.
Toyoda S, Kawaguchi M, Kobayashi T, Tarusawa E, Toyama T, Okano M, Oda M, Nakauchi H, Yoshimura Y, Sanbo M, Hirabayashi M, Hirayama T, Hirabayashi T, Yagi T
Neuron82(1)94-108(2014 Apr)

Monoallelic yet combinatorial expression of variable exons of the protocadherin-alpha gene cluster in single neurons.
Esumi S, Kakazu N, Taguchi Y, Hirayama T, Sasaki A, Hirabayashi T, Koide T, Kitsukawa T, Hamada S, Yagi T
Nature genetics37(2)171-6(2005 Feb)

CNR/Pcdhalpha family in subplate neurons, and developing cortical connectivity.
Morishita H, Murata Y, Esumi S, Hamada S, Yagi T
Neuroreport15(17)2595-9(2004 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Pcdha12 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pcdha12 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMu10840	NM_138663.2 Latest version!	Mus musculus protocadherin alpha 12 (Pcdha12), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$559.30 $799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Pcdha12 ( NM_138663.2 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_619604.1 Mus musculus protocadherin alpha 12 (Pcdha12), mRNA.

Price & Availability↑

CloneID	OMu10840
Clone ID Related Accession (Same CDS sequence)	NM_138663.2
Accession Version	NM_138663.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2853bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-10
Organism	Mus musculus(house mouse)
Product	protocadherin alpha-12 precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AY013759.1. On May 27, 2003 this sequence version replaced NM_138663.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AY013759.1, BC141111.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384, SAMN01164131 [ECO:0000348] ##Evidence-Data-END##

ATGCTATTAT TCTCGCAAAG CGGCCCAGGA TCCCGGTGCC TCCTGCTCTC GTTCCTGCTC 
CTCACAACCT GGGAGGCAGG GAGCGGCCAG CTCCACTACT CCATCCCAGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGAC GGAGCTGGTG 
CCCCGCTTGT TCAGGGTGGC GTCCAAGGAC CGCGGAGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCTTG 
GAGTGTAGCA TCCACCTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCACGTGGAG 
GTGGAGGTGA GGGACATTAA TGACAATCCA CCTGTGTTCC CTGAAACCAA CAAAAACATC 
GTGATTGCCG AGTCGAGACC TCCAGAAACT AGATTTCCAC TAGATGGCGC ATCCGATGCA 
GATATCGGAG TCAATTCCGC CTTGACCTAC CGATTGGATC CCAGCGATTA TTTCGCTTTG 
GACACGCAAA ACAATCGTGA GCGAACTTCT TCGTTATCCC TTGTGTTAAA GAAATCATTA 
GACAGAGAAG AAATTCAGGA GTATAGTTTA TTACTAACAG CTAGTGACGG AGGCAAACCG 
GAACTGACTG GCACAGTTCA GCTGCTGATC ACCATCCTCG ATGTGAATGA CAATGCTCCG 
GAGTTTGATC GGTTCGTTTA CAAAGTTAAA GTGTTAGAGG ATGCACTTAA TGGAACGTTG 
GTGATTAACT TAAACGCCAC AGATCCTGAC GAGGGTATAA ATGGAGATAT AATCTACTCC 
TTCAGACGGC CTGTATCCCC TGCGGTGGTG CATGCATTTA ATATAGATTC CAACAGTGGA 
GAAGTTAGGA CAAAGGGGCT ACTGGATTTC GAAGAAATTA AACTATATGA GATACCCGTG 
GAGGCAGTAG ACAAAGGCAA TATTCCAATG ACAGGCCATT GTACCCTTCT GGTGGAATTA 
CTGGATGTAA ATGATAATGC ACCAGAGGTC ACGATTACTT CCCTGTCACT CCCAGTCAGA 
GAAGATGCTC AGCCAAGCAC TGTCATAGCT CTCGTCAGCG TGTCTGACCG AGACTCTGGT 
GACAACGGGC AGGTGACTTG CTCTTTGACG CCTCACCTCC CCTTCAAGCT GGTGTCCACT 
TTCAAGAATT ACTATTCGTT AGTGTTGGAC AGCGCCCTGG ACCGCGAAAC CACCGCTGAC 
TATAAGGTGG TGGTGACAGC CCGAGACAGG GGCTCACCCT CGCTGTGGTC CACGGCCAGC 
GTGTCCGTGG AGGTGGCTGA TGTGAACGAC AATGCTCCTG CATTCGCGCA GCCCGAATAC 
ACGGTGTTTG TGAAGGAGAA CAACCCGCCT GGTGCGCACA TCTTCACGGT GTCAGCGATG 
GATGCGGATG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GAGGGTGGGC 
GAGCGCTTGC TGTCGAGCTA TGTGTCTGTG CACGCGGAGA GTGGCAAGGT GTTCGCGCTG 
CAGCCTCTGG ACCATGAGGA GCTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCT 
GGTGTGCCTT CCCTGGGCAG TAATGTGACT CTGCAGGTGT TTGTGCTGGA TGAGAATGAC 
AATGCGCCCA CGCTATTGCC TCACAGAGCC GTTGGAGCTG TCGGGACAGT GAGCGAACTT 
GTGCCTAGGT CAGTGGGTTC AGGGCATGTA GTGGCGAAGG TGCGGGCAGT AGATGCGGAC 
TCTGGTTACA ATGCGTGGCT GTCTTATGAG CTTCAGTTGG CAGCAGGGGG CATGCGCAGT 
CCCTTCCGCG TGGGTCTGTA CACGGGCGAG ATCAGCACGA CGCGCTCCCT AGACGAAGCA 
GATGCGCCAC GCCAGCGTCT GTTGGTGTTG GTGAAGGACC ACGGCGAGCC CGCACTGACC 
GCCACAGCCA CGGTGCTGGT GTCTCTGGTG GAGAATGGCC AAGCACCCAA GATATCTTCC 
CTTGCTTCGG AGAGCACAGC ATCTTCGGAG GCGTCGCTGG TGACTGTCAA CGTGTACCTG 
ATCATTGCTA TTTGCGCAGT GTCCAGCCTG TTAGTGATCA CGCTGCTGCT TTACACTGCG 
CTGCGCTGCT CAGCAAGGTC CACAGATGGA GCCTGTGCTC CGGGGAAGCC CATGCTGGTG 
TGCTCCAGCG CGGTGGGGAG CTGGTCATAC TCGCAGCAGA GGAGACAGAG GGTGTGTTCT 
GGAGAGGGTC CACCTAAGAC CGACCTCATG GCCTTTAGTC CTAGTCTCCC TCCTGTGTTA 
GGCTCTGCAG AGGACACATG TCAGAGAGAA AGGCAGGTAG AACATTTGAA AGAGCCCCGG 
CAGCCCAACC CTGACTGGCG CTACTCTGCC TCGCTAAGAG CAGGCATGCA CAGCTCTGTG 
CACCTGGAGG AGGCTGGCAT TCTACGGGCT GGTCCAGGAG GGCCTGATCA GCAGTGGCCA 
ACAGTATCCA GTGCAACACC AGAACCTGAG GCAGGAGAGG TGTCCCCTCC GGTGGGCGCC 
GGTGTCAACA GCAACAGCTG GACCTTTAAA TACGGACCAG GCAACCCCAA ACAGTCCGGT 
CCCGGTGAGT TGCCAGACAA ATTCATTATC CCAGGATCTC CTGCAATCAT CTCCATCCGG 
CAGGAGCCTG CTAACAACCA AATTGACAAA AGCGATTTTA TAACCTTCGG CAAAAAGGAG 
GAGACCAAGA AAAAGAAGAA AAAGAAGAAG GGTAACAAGA CCCAGGAGAA AAAAGAGAAA 
GGGAACAGCA CGACGGACAA CAGTGACCAG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_619604.1
CDS	1..2853
Translation	MLLFSQSGPGSRCLLLSFLLLTTWEAGSGQLHYSIPEEAKHGTFVGRIAQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSLECSIHLEVIVDRPLQVFHVEVEVRDINDNPPVFPETNKNIVIAESRPPETRFPLDGASDADIGVNSALTYRLDPSDYFALDTQNNRERTSSLSLVLKKSLDREEIQEYSLLLTASDGGKPELTGTVQLLITILDVNDNAPEFDRFVYKVKVLEDALNGTLVINLNATDPDEGINGDIIYSFRRPVSPAVVHAFNIDSNSGEVRTKGLLDFEEIKLYEIPVEAVDKGNIPMTGHCTLLVELLDVNDNAPEVTITSLSLPVREDAQPSTVIALVSVSDRDSGDNGQVTCSLTPHLPFKLVSTFKNYYSLVLDSALDRETTADYKVVVTARDRGSPSLWSTASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGAHIFTVSAMDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVSARDAGVPSLGSNVTLQVFVLDENDNAPTLLPHRAVGAVGTVSELVPRSVGSGHVVAKVRAVDADSGYNAWLSYELQLAAGGMRSPFRVGLYTGEISTTRSLDEADAPRQRLLVLVKDHGEPALTATATVLVSLVENGQAPKISSLASESTASSEASLVTVNVYLIIAICAVSSLLVITLLLYTALRCSARSTDGACAPGKPMLVCSSAVGSWSYSQQRRQRVCSGEGPPKTDLMAFSPSLPPVLGSAEDTCQRERQVEHLKEPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPANNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ

Target ORF information:

RefSeq Version	NM_138663.2
Organism	Mus musculus(house mouse)
Definition	Mus musculus protocadherin alpha 12 (Pcdha12), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_138663.2

ORF Insert Sequence:

ATGCTATTAT TCTCGCAAAG CGGCCCAGGA TCCCGGTGCC TCCTGCTCTC GTTCCTGCTC 
CTCACAACCT GGGAGGCAGG GAGCGGCCAG CTCCACTACT CCATCCCAGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGAC GGAGCTGGTG 
CCCCGCTTGT TCAGGGTGGC GTCCAAGGAC CGCGGAGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCTTG 
GAGTGTAGCA TCCACCTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCACGTGGAG 
GTGGAGGTGA GGGACATTAA TGACAATCCA CCTGTGTTCC CTGAAACCAA CAAAAACATC 
GTGATTGCCG AGTCGAGACC TCCAGAAACT AGATTTCCAC TAGATGGCGC ATCCGATGCA 
GATATCGGAG TCAATTCCGC CTTGACCTAC CGATTGGATC CCAGCGATTA TTTCGCTTTG 
GACACGCAAA ACAATCGTGA GCGAACTTCT TCGTTATCCC TTGTGTTAAA GAAATCATTA 
GACAGAGAAG AAATTCAGGA GTATAGTTTA TTACTAACAG CTAGTGACGG AGGCAAACCG 
GAACTGACTG GCACAGTTCA GCTGCTGATC ACCATCCTCG ATGTGAATGA CAATGCTCCG 
GAGTTTGATC GGTTCGTTTA CAAAGTTAAA GTGTTAGAGG ATGCACTTAA TGGAACGTTG 
GTGATTAACT TAAACGCCAC AGATCCTGAC GAGGGTATAA ATGGAGATAT AATCTACTCC 
TTCAGACGGC CTGTATCCCC TGCGGTGGTG CATGCATTTA ATATAGATTC CAACAGTGGA 
GAAGTTAGGA CAAAGGGGCT ACTGGATTTC GAAGAAATTA AACTATATGA GATACCCGTG 
GAGGCAGTAG ACAAAGGCAA TATTCCAATG ACAGGCCATT GTACCCTTCT GGTGGAATTA 
CTGGATGTAA ATGATAATGC ACCAGAGGTC ACGATTACTT CCCTGTCACT CCCAGTCAGA 
GAAGATGCTC AGCCAAGCAC TGTCATAGCT CTCGTCAGCG TGTCTGACCG AGACTCTGGT 
GACAACGGGC AGGTGACTTG CTCTTTGACG CCTCACCTCC CCTTCAAGCT GGTGTCCACT 
TTCAAGAATT ACTATTCGTT AGTGTTGGAC AGCGCCCTGG ACCGCGAAAC CACCGCTGAC 
TATAAGGTGG TGGTGACAGC CCGAGACAGG GGCTCACCCT CGCTGTGGTC CACGGCCAGC 
GTGTCCGTGG AGGTGGCTGA TGTGAACGAC AATGCTCCTG CATTCGCGCA GCCCGAATAC 
ACGGTGTTTG TGAAGGAGAA CAACCCGCCT GGTGCGCACA TCTTCACGGT GTCAGCGATG 
GATGCGGATG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GAGGGTGGGC 
GAGCGCTTGC TGTCGAGCTA TGTGTCTGTG CACGCGGAGA GTGGCAAGGT GTTCGCGCTG 
CAGCCTCTGG ACCATGAGGA GCTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCT 
GGTGTGCCTT CCCTGGGCAG TAATGTGACT CTGCAGGTGT TTGTGCTGGA TGAGAATGAC 
AATGCGCCCA CGCTATTGCC TCACAGAGCC GTTGGAGCTG TCGGGACAGT GAGCGAACTT 
GTGCCTAGGT CAGTGGGTTC AGGGCATGTA GTGGCGAAGG TGCGGGCAGT AGATGCGGAC 
TCTGGTTACA ATGCGTGGCT GTCTTATGAG CTTCAGTTGG CAGCAGGGGG CATGCGCAGT 
CCCTTCCGCG TGGGTCTGTA CACGGGCGAG ATCAGCACGA CGCGCTCCCT AGACGAAGCA 
GATGCGCCAC GCCAGCGTCT GTTGGTGTTG GTGAAGGACC ACGGCGAGCC CGCACTGACC 
GCCACAGCCA CGGTGCTGGT GTCTCTGGTG GAGAATGGCC AAGCACCCAA GATATCTTCC 
CTTGCTTCGG AGAGCACAGC ATCTTCGGAG GCGTCGCTGG TGACTGTCAA CGTGTACCTG 
ATCATTGCTA TTTGCGCAGT GTCCAGCCTG TTAGTGATCA CGCTGCTGCT TTACACTGCG 
CTGCGCTGCT CAGCAAGGTC CACAGATGGA GCCTGTGCTC CGGGGAAGCC CATGCTGGTG 
TGCTCCAGCG CGGTGGGGAG CTGGTCATAC TCGCAGCAGA GGAGACAGAG GGTGTGTTCT 
GGAGAGGGTC CACCTAAGAC CGACCTCATG GCCTTTAGTC CTAGTCTCCC TCCTGTGTTA 
GGCTCTGCAG AGGACACATG TCAGAGAGAA AGGCAGGTAG AACATTTGAA AGAGCCCCGG 
CAGCCCAACC CTGACTGGCG CTACTCTGCC TCGCTAAGAG CAGGCATGCA CAGCTCTGTG 
CACCTGGAGG AGGCTGGCAT TCTACGGGCT GGTCCAGGAG GGCCTGATCA GCAGTGGCCA 
ACAGTATCCA GTGCAACACC AGAACCTGAG GCAGGAGAGG TGTCCCCTCC GGTGGGCGCC 
GGTGTCAACA GCAACAGCTG GACCTTTAAA TACGGACCAG GCAACCCCAA ACAGTCCGGT 
CCCGGTGAGT TGCCAGACAA ATTCATTATC CCAGGATCTC CTGCAATCAT CTCCATCCGG 
CAGGAGCCTG CTAACAACCA AATTGACAAA AGCGATTTTA TAACCTTCGG CAAAAAGGAG 
GAGACCAAGA AAAAGAAGAA AAAGAAGAAG GGTAACAAGA CCCAGGAGAA AAAAGAGAAA 
GGGAACAGCA CGACGGACAA CAGTGACCAG TGA