LOC105650817 cDNA ORF clone, Jatropha curcas

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105650817
Entrez Gene ID	105650817
Full Name	protein UPSTREAM OF FLC
Gene Type	protein-coding
Organism	Jatropha curcas

mRNA and Protein(s)

mRNA	Protein	Name
XM_012237780.2	XP_012093170.1	protein UPSTREAM OF FLC isoform X2
XM_020684680.1	XP_020540339.1	protein UPSTREAM OF FLC isoform X1

Pathways from BioSystems
Gene Ontology

The following LOC105650817 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105650817 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OJa39998	XM_020684680.1 Latest version!	Jatropha curcas protein UPSTREAM OF FLC (LOC105650817), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OJa39999	XM_012237780.2 Latest version!	Jatropha curcas protein UPSTREAM OF FLC (LOC105650817), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105650817 ( XM_020684680.1 ) cDNA ORF clone, Jatropha curcas -> XP_020540339.1 Jatropha curcas protein UPSTREAM OF FLC (LOC105650817), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OJa39998
Clone ID Related Accession (Same CDS sequence)	XM_020684680.1
Accession Version	XM_020684680.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1305bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-04-05
Organism	Jatropha curcas
Product	protein UPSTREAM OF FLC isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012124061.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Jatropha curcas Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGATAACG TTCGACATAG AAGAACAAGC GAGAGAGAAA ATAGTCCCAA CAGAGCCAAA 
GTAAGCATAC AAGTCCAGCC AAAGCAGGTC AAATCTATCA GAAAAATTCA AGTTATTTAC 
TATCTTTCTA GAAATGGCCA TCTTCAACAT CCACATTTCA TGGAAGTTAC CCATTTCGCC 
AATCAACACC TTCGTTTGAA AGATTTTATG GATCGGCTCA CAGTTCTTAG AGGCAAAGGG 
ATGCCTTCTT TATACTCATG GTCTTGCAAA AGGAGCTACA AGAATGGCTA TGTGTGGAAT 
GATTTGGCAG AAAATGATAT TATTTATCCT TCTGATGGAG CTGAGTATGT TCTCAAAGGA 
TCTGAATTAG TTGAAGGATG TTCTGCAGAA AAGTTCCAAG AACTTCAACT AAGCAATAAT 
AACATACAAC TAATTCAAGA GCCCAAATAC CATGCAAAAC CAAAGCAACT CGGTCCGAGT 
CAACTCTGCA CCAAGTATGA GTTTGAAGAA TATGAAGAAG AAGACCAAGA ACAAGAATCA 
CAAGAAGAAT ATGAAGATGA AGAGAAAACA AGCTACACAA CCTCCACAAC TCCTCACTCT 
CGTTGTTCTA GAGGTGTGTC TACTGAAGAG TTAGAAGACC AACAAGAAGC TACAAAAAAC 
CCGAACTCAA CTGAGCCAAC TCATCCCAAC TCGTGCCCAC CACCATCAAC CTCCTCATCG 
ATAGTAAATA AAAACAAGCA TCAAAACACA ACTTCCAAAC GATTTGAAGA TGGTGACCCA 
ATTGCCACTG AGTCACCGCC GAGTCGTAAC TCGGTCCTCC TCCAACTCAT CTCATGTGGA 
AATTTAGCTG TAGCTAAAGC AAAGGGTAAT AGTAATGGAC TGAGTTTAAA ACAACCTGAA 
AAGATGAAGA AAAATGATAT TGTGATTAAA AGGAGTAGTG AAAGCAATCT TCTTCATAAA 
GGGGTTTTGT GTAAAAGTGC AATGAGAGTT GGAGAAGAGG AAATGATGAT TAGTTGCATG 
TCTGAAAATC CTAGGTTTGG AAATTTACAG GTGGAAGAGA AGCAGTATTT TAGTGGTAGC 
ATTGTTGAGT CAGTGAGTGA GAACCGAGTT GCTGTTGAGT CCGCGTTGAA GAGATCAAAC 
TCGTATAATG AAGAAAGGAG CAAAAGGAAT GGAGTGATGG AAGAAGCAGT ACGAGAGGAA 
GACATTAAAG AGGTGAAAGC AACAAAAGCC AAATGCATTC CTCTAAAGAA GGCTTCATCT 
ACATTTTCTT GTTCATCATC TTCAAAACAA ACCAAGAAAT ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_020540339.1
CDS	140..1444
Translation	MDNVRHRRTSERENSPNRAKVSIQVQPKQVKSIRKIQVIYYLSRNGHLQHPHFMEVTHFANQHLRLKDFMDRLTVLRGKGMPSLYSWSCKRSYKNGYVWNDLAENDIIYPSDGAEYVLKGSELVEGCSAEKFQELQLSNNNIQLIQEPKYHAKPKQLGPSQLCTKYEFEEYEEEDQEQESQEEYEDEEKTSYTTSTTPHSRCSRGVSTEELEDQQEATKNPNSTEPTHPNSCPPPSTSSSIVNKNKHQNTTSKRFEDGDPIATESPPSRNSVLLQLISCGNLAVAKAKGNSNGLSLKQPEKMKKNDIVIKRSSESNLLHKGVLCKSAMRVGEEEMMISCMSENPRFGNLQVEEKQYFSGSIVESVSENRVAVESALKRSNSYNEERSKRNGVMEEAVREEDIKEVKATKAKCIPLKKASSTFSCSSSSKQTKKY

Target ORF information:

RefSeq Version	XM_020684680.1
Organism	Jatropha curcas
Definition	Jatropha curcas protein UPSTREAM OF FLC (LOC105650817), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_020684680.1

ORF Insert Sequence:

ATGGATAACG TTCGACATAG AAGAACAAGC GAGAGAGAAA ATAGTCCCAA CAGAGCCAAA 
GTAAGCATAC AAGTCCAGCC AAAGCAGGTC AAATCTATCA GAAAAATTCA AGTTATTTAC 
TATCTTTCTA GAAATGGCCA TCTTCAACAT CCACATTTCA TGGAAGTTAC CCATTTCGCC 
AATCAACACC TTCGTTTGAA AGATTTTATG GATCGGCTCA CAGTTCTTAG AGGCAAAGGG 
ATGCCTTCTT TATACTCATG GTCTTGCAAA AGGAGCTACA AGAATGGCTA TGTGTGGAAT 
GATTTGGCAG AAAATGATAT TATTTATCCT TCTGATGGAG CTGAGTATGT TCTCAAAGGA 
TCTGAATTAG TTGAAGGATG TTCTGCAGAA AAGTTCCAAG AACTTCAACT AAGCAATAAT 
AACATACAAC TAATTCAAGA GCCCAAATAC CATGCAAAAC CAAAGCAACT CGGTCCGAGT 
CAACTCTGCA CCAAGTATGA GTTTGAAGAA TATGAAGAAG AAGACCAAGA ACAAGAATCA 
CAAGAAGAAT ATGAAGATGA AGAGAAAACA AGCTACACAA CCTCCACAAC TCCTCACTCT 
CGTTGTTCTA GAGGTGTGTC TACTGAAGAG TTAGAAGACC AACAAGAAGC TACAAAAAAC 
CCGAACTCAA CTGAGCCAAC TCATCCCAAC TCGTGCCCAC CACCATCAAC CTCCTCATCG 
ATAGTAAATA AAAACAAGCA TCAAAACACA ACTTCCAAAC GATTTGAAGA TGGTGACCCA 
ATTGCCACTG AGTCACCGCC GAGTCGTAAC TCGGTCCTCC TCCAACTCAT CTCATGTGGA 
AATTTAGCTG TAGCTAAAGC AAAGGGTAAT AGTAATGGAC TGAGTTTAAA ACAACCTGAA 
AAGATGAAGA AAAATGATAT TGTGATTAAA AGGAGTAGTG AAAGCAATCT TCTTCATAAA 
GGGGTTTTGT GTAAAAGTGC AATGAGAGTT GGAGAAGAGG AAATGATGAT TAGTTGCATG 
TCTGAAAATC CTAGGTTTGG AAATTTACAG GTGGAAGAGA AGCAGTATTT TAGTGGTAGC 
ATTGTTGAGT CAGTGAGTGA GAACCGAGTT GCTGTTGAGT CCGCGTTGAA GAGATCAAAC 
TCGTATAATG AAGAAAGGAG CAAAAGGAAT GGAGTGATGG AAGAAGCAGT ACGAGAGGAA 
GACATTAAAG AGGTGAAAGC AACAAAAGCC AAATGCATTC CTCTAAAGAA GGCTTCATCT 
ACATTTTCTT GTTCATCATC TTCAAAACAA ACCAAGAAAT ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC105650817 ( XM_012237780.2 ) cDNA ORF clone, Jatropha curcas -> XP_012093170.1 Jatropha curcas protein UPSTREAM OF FLC (LOC105650817), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OJa39999
Clone ID Related Accession (Same CDS sequence)	XM_012237780.2
Accession Version	XM_012237780.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1302bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-04-05
Organism	Jatropha curcas
Product	protein UPSTREAM OF FLC isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012124061.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 6, 2017 this sequence version replaced XM_012237780.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Jatropha curcas Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGATAACG TTCGACATAG AAGAACAAGC GAGAGAGAAA ATAGTCCCAA CAGAGCCAAA 
GTAAGCATAC AAGTCCAGCC AAAGCAGGTC AAATCTATCA GAAAAATTCA AGTTATTTAC 
TATCTTTCTA GAAATGGCCA TCTTCAACAT CCACATTTCA TGGAAGTTAC CCATTTCGCC 
AATCAACACC TTCGTTTGAA AGATTTTATG GATCGGCTCA CAGTTCTTAG AGGCAAAGGG 
ATGCCTTCTT TATACTCATG GTCTTGCAAA AGGAGCTACA AGAATGGCTA TGTGTGGAAT 
GATTTGGCAG AAAATGATAT TATTTATCCT TCTGATGGAG CTGAGTATGT TCTCAAAGGA 
TCTGAATTAG TTGAAGGATG TTCTGAAAAG TTCCAAGAAC TTCAACTAAG CAATAATAAC 
ATACAACTAA TTCAAGAGCC CAAATACCAT GCAAAACCAA AGCAACTCGG TCCGAGTCAA 
CTCTGCACCA AGTATGAGTT TGAAGAATAT GAAGAAGAAG ACCAAGAACA AGAATCACAA 
GAAGAATATG AAGATGAAGA GAAAACAAGC TACACAACCT CCACAACTCC TCACTCTCGT 
TGTTCTAGAG GTGTGTCTAC TGAAGAGTTA GAAGACCAAC AAGAAGCTAC AAAAAACCCG 
AACTCAACTG AGCCAACTCA TCCCAACTCG TGCCCACCAC CATCAACCTC CTCATCGATA 
GTAAATAAAA ACAAGCATCA AAACACAACT TCCAAACGAT TTGAAGATGG TGACCCAATT 
GCCACTGAGT CACCGCCGAG TCGTAACTCG GTCCTCCTCC AACTCATCTC ATGTGGAAAT 
TTAGCTGTAG CTAAAGCAAA GGGTAATAGT AATGGACTGA GTTTAAAACA ACCTGAAAAG 
ATGAAGAAAA ATGATATTGT GATTAAAAGG AGTAGTGAAA GCAATCTTCT TCATAAAGGG 
GTTTTGTGTA AAAGTGCAAT GAGAGTTGGA GAAGAGGAAA TGATGATTAG TTGCATGTCT 
GAAAATCCTA GGTTTGGAAA TTTACAGGTG GAAGAGAAGC AGTATTTTAG TGGTAGCATT 
GTTGAGTCAG TGAGTGAGAA CCGAGTTGCT GTTGAGTCCG CGTTGAAGAG ATCAAACTCG 
TATAATGAAG AAAGGAGCAA AAGGAATGGA GTGATGGAAG AAGCAGTACG AGAGGAAGAC 
ATTAAAGAGG TGAAAGCAAC AAAAGCCAAA TGCATTCCTC TAAAGAAGGC TTCATCTACA 
TTTTCTTGTT CATCATCTTC AAAACAAACC AAGAAATATT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012093170.1
CDS	139..1440
Translation	MDNVRHRRTSERENSPNRAKVSIQVQPKQVKSIRKIQVIYYLSRNGHLQHPHFMEVTHFANQHLRLKDFMDRLTVLRGKGMPSLYSWSCKRSYKNGYVWNDLAENDIIYPSDGAEYVLKGSELVEGCSEKFQELQLSNNNIQLIQEPKYHAKPKQLGPSQLCTKYEFEEYEEEDQEQESQEEYEDEEKTSYTTSTTPHSRCSRGVSTEELEDQQEATKNPNSTEPTHPNSCPPPSTSSSIVNKNKHQNTTSKRFEDGDPIATESPPSRNSVLLQLISCGNLAVAKAKGNSNGLSLKQPEKMKKNDIVIKRSSESNLLHKGVLCKSAMRVGEEEMMISCMSENPRFGNLQVEEKQYFSGSIVESVSENRVAVESALKRSNSYNEERSKRNGVMEEAVREEDIKEVKATKAKCIPLKKASSTFSCSSSSKQTKKY

Target ORF information:

RefSeq Version	XM_012237780.2
Organism	Jatropha curcas
Definition	Jatropha curcas protein UPSTREAM OF FLC (LOC105650817), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012237780.2

ORF Insert Sequence:

ATGGATAACG TTCGACATAG AAGAACAAGC GAGAGAGAAA ATAGTCCCAA CAGAGCCAAA 
GTAAGCATAC AAGTCCAGCC AAAGCAGGTC AAATCTATCA GAAAAATTCA AGTTATTTAC 
TATCTTTCTA GAAATGGCCA TCTTCAACAT CCACATTTCA TGGAAGTTAC CCATTTCGCC 
AATCAACACC TTCGTTTGAA AGATTTTATG GATCGGCTCA CAGTTCTTAG AGGCAAAGGG 
ATGCCTTCTT TATACTCATG GTCTTGCAAA AGGAGCTACA AGAATGGCTA TGTGTGGAAT 
GATTTGGCAG AAAATGATAT TATTTATCCT TCTGATGGAG CTGAGTATGT TCTCAAAGGA 
TCTGAATTAG TTGAAGGATG TTCTGAAAAG TTCCAAGAAC TTCAACTAAG CAATAATAAC 
ATACAACTAA TTCAAGAGCC CAAATACCAT GCAAAACCAA AGCAACTCGG TCCGAGTCAA 
CTCTGCACCA AGTATGAGTT TGAAGAATAT GAAGAAGAAG ACCAAGAACA AGAATCACAA 
GAAGAATATG AAGATGAAGA GAAAACAAGC TACACAACCT CCACAACTCC TCACTCTCGT 
TGTTCTAGAG GTGTGTCTAC TGAAGAGTTA GAAGACCAAC AAGAAGCTAC AAAAAACCCG 
AACTCAACTG AGCCAACTCA TCCCAACTCG TGCCCACCAC CATCAACCTC CTCATCGATA 
GTAAATAAAA ACAAGCATCA AAACACAACT TCCAAACGAT TTGAAGATGG TGACCCAATT 
GCCACTGAGT CACCGCCGAG TCGTAACTCG GTCCTCCTCC AACTCATCTC ATGTGGAAAT 
TTAGCTGTAG CTAAAGCAAA GGGTAATAGT AATGGACTGA GTTTAAAACA ACCTGAAAAG 
ATGAAGAAAA ATGATATTGT GATTAAAAGG AGTAGTGAAA GCAATCTTCT TCATAAAGGG 
GTTTTGTGTA AAAGTGCAAT GAGAGTTGGA GAAGAGGAAA TGATGATTAG TTGCATGTCT 
GAAAATCCTA GGTTTGGAAA TTTACAGGTG GAAGAGAAGC AGTATTTTAG TGGTAGCATT 
GTTGAGTCAG TGAGTGAGAA CCGAGTTGCT GTTGAGTCCG CGTTGAAGAG ATCAAACTCG 
TATAATGAAG AAAGGAGCAA AAGGAATGGA GTGATGGAAG AAGCAGTACG AGAGGAAGAC 
ATTAAAGAGG TGAAAGCAAC AAAAGCCAAA TGCATTCCTC TAAAGAAGGC TTCATCTACA 
TTTTCTTGTT CATCATCTTC AAAACAAACC AAGAAATATT AA