LOC105648496 cDNA ORF clone, Jatropha curcas

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105648496
Entrez Gene ID	105648496
Full Name	E3 ubiquitin-protein ligase XBAT33
Gene Type	protein-coding
Organism	Jatropha curcas

mRNA and Protein(s)

mRNA	Protein	Name
XM_012234899.2	XP_012090289.1	E3 ubiquitin-protein ligase XBAT33

Pathways from BioSystems
Gene Ontology

The following LOC105648496 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105648496 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OJa64559	XM_012234899.2 Latest version!	Jatropha curcas E3 ubiquitin-protein ligase XBAT33 (LOC105648496), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105648496 ( XM_012234899.2 ) cDNA ORF clone, Jatropha curcas -> XP_012090289.1 Jatropha curcas E3 ubiquitin-protein ligase XBAT33 (LOC105648496), mRNA.

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CloneID	OJa64559
Clone ID Related Accession (Same CDS sequence)	XM_012234899.2
Accession Version	XM_012234899.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1542bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-04-05
Organism	Jatropha curcas
Product	E3 ubiquitin-protein ligase XBAT33
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012125302.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 6, 2017 this sequence version replaced XM_012234899.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Jatropha curcas Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGAAATT CATTTGGATG CTCTGCCTCC GGCGAAAGAT TAGTATCGGC GGCTAGAGAT 
GGCGATTTGG TGGAGGCTAA GATGCTTTTG GATTGCAATC CGTGCCTCGC CAAGTACTCT 
ACCTTTGGAG GCCTCAATTC TCCTCTCCAT TTCGCCGCCG CTAAAGGCCA CAACGAGATT 
GTCGCGTTGT TGCTTGAGAA TGGAGCTGAC GTGAATTCAA GGAATTATTG TGGCCAGACG 
GCATTAATGC AAGCTTGTCG ATATGGGCAC TGGGAAGTTG TACAGACTCT TCTTCTCTTT 
AGATGCAACG TTACACGAGC AGATTACCTT AGCGGAAGGA CTGCTCTACA TTTTGCAGCG 
GTAAATGGTC ATGCAAGGTG CATTAGACTA GTGGTGGCTG ACTTTGTTCC TAGCGCTCCT 
TTTGAACCTA TGCGTGCTCA GACAGAAGCC GATACTGGGG ATGCTTCTAG TGCAAAAAAC 
AAATTAGACC AGAGTGCTCT TTCCAAGTTT GTAAATAAGG CGGCTGATGG TGGTATTACT 
GCTCTTCACA TGGCTGCATT GAATGGGTAT TTTGATTGTG TACAACTTTT ACTTGATATT 
CATGCAAATG TGTCAGCAGT GACATTTCAT TATGGAACAA CGATGGATTT GATAGGAGCT 
GGAAGCACTC CTTTGCACTA TGCTGCTTGT GGGGGGAATT TAAAGTGTTG TCAGATCCTC 
ATTGCAAGAG GTGCCAGCCG GATGACATTA AATTGCAATG GGTGGCTGCC TGTTGATGTT 
GCCAGGATGT GGGGGCGTCA TTGGCTTGAA CCTTTGTTGG CACCAAATTC TGACTCCAAC 
ATACCAAGAT TTACTCACTC TAACTACCTA TCCTTGCCTC TTTTGAGCGT GCTTAATATA 
GCAAGAGAGT ATGGGATGCA GAGCTTGACA ACCTCATCTG ATGACCCTGA TATTTGTGCT 
GTTTGTCTGG AGAAAGCATG TAATGTAGCT GCTGAAGGGT GTGGGCATGA GCTCTGTGTA 
AGATGTGCGC TGTATCTTTG CTCAACAAGC AACATTCCTT CGGAAATGGT GGGCCCACCT 
GGCTCCATTC CATGTCCTCT TTGCAGACAT GGCATTGTAT CTTTCGTTAA ATTGCCTGGT 
TACCCAGCAA AAGAAATGAA ACTTCCTTTG TCCCTTGGCC TCTGTACTCC ATGTATGCTC 
CACTCCCGTG AAACAGATGG ACAATCCCCA GCACGTGTGC CAGAGATCCG AAAGAATCGT 
GTGGCTTCAG TTTCTTCTGA TTTCATGTGT CCAGTTACTT GTAGCCCATT TCCTTCTGTT 
GCAATCCCTT TATGCACCTG CAATGATGGC CCATGCCCAT CTTTTGAACC TCGAACTGTG 
GAAACTCGAG ATGATTCCCC CCGACGTTCA CAAACAACAT CTGTAGTCCA GGATAAAATT 
GAAGGGCCAA GACTAGAGAA AACAAGCTGT TCAGGGATGA TGTTTTGGGG TAGAAGAAGC 
TGCAGCAGGG AGCACCAGTG CAATTCAGAA ATAAATGCAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012090289.1
CDS	106..1647
Translation	MGNSFGCSASGERLVSAARDGDLVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQTALMQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHARCIRLVVADFVPSAPFEPMRAQTEADTGDASSAKNKLDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDIHANVSAVTFHYGTTMDLIGAGSTPLHYAACGGNLKCCQILIARGASRMTLNCNGWLPVDVARMWGRHWLEPLLAPNSDSNIPRFTHSNYLSLPLLSVLNIAREYGMQSLTTSSDDPDICAVCLEKACNVAAEGCGHELCVRCALYLCSTSNIPSEMVGPPGSIPCPLCRHGIVSFVKLPGYPAKEMKLPLSLGLCTPCMLHSRETDGQSPARVPEIRKNRVASVSSDFMCPVTCSPFPSVAIPLCTCNDGPCPSFEPRTVETRDDSPRRSQTTSVVQDKIEGPRLEKTSCSGMMFWGRRSCSREHQCNSEINA

Target ORF information:

RefSeq Version	XM_012234899.2
Organism	Jatropha curcas
Definition	Jatropha curcas E3 ubiquitin-protein ligase XBAT33 (LOC105648496), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012234899.2

ORF Insert Sequence:

ATGGGAAATT CATTTGGATG CTCTGCCTCC GGCGAAAGAT TAGTATCGGC GGCTAGAGAT 
GGCGATTTGG TGGAGGCTAA GATGCTTTTG GATTGCAATC CGTGCCTCGC CAAGTACTCT 
ACCTTTGGAG GCCTCAATTC TCCTCTCCAT TTCGCCGCCG CTAAAGGCCA CAACGAGATT 
GTCGCGTTGT TGCTTGAGAA TGGAGCTGAC GTGAATTCAA GGAATTATTG TGGCCAGACG 
GCATTAATGC AAGCTTGTCG ATATGGGCAC TGGGAAGTTG TACAGACTCT TCTTCTCTTT 
AGATGCAACG TTACACGAGC AGATTACCTT AGCGGAAGGA CTGCTCTACA TTTTGCAGCG 
GTAAATGGTC ATGCAAGGTG CATTAGACTA GTGGTGGCTG ACTTTGTTCC TAGCGCTCCT 
TTTGAACCTA TGCGTGCTCA GACAGAAGCC GATACTGGGG ATGCTTCTAG TGCAAAAAAC 
AAATTAGACC AGAGTGCTCT TTCCAAGTTT GTAAATAAGG CGGCTGATGG TGGTATTACT 
GCTCTTCACA TGGCTGCATT GAATGGGTAT TTTGATTGTG TACAACTTTT ACTTGATATT 
CATGCAAATG TGTCAGCAGT GACATTTCAT TATGGAACAA CGATGGATTT GATAGGAGCT 
GGAAGCACTC CTTTGCACTA TGCTGCTTGT GGGGGGAATT TAAAGTGTTG TCAGATCCTC 
ATTGCAAGAG GTGCCAGCCG GATGACATTA AATTGCAATG GGTGGCTGCC TGTTGATGTT 
GCCAGGATGT GGGGGCGTCA TTGGCTTGAA CCTTTGTTGG CACCAAATTC TGACTCCAAC 
ATACCAAGAT TTACTCACTC TAACTACCTA TCCTTGCCTC TTTTGAGCGT GCTTAATATA 
GCAAGAGAGT ATGGGATGCA GAGCTTGACA ACCTCATCTG ATGACCCTGA TATTTGTGCT 
GTTTGTCTGG AGAAAGCATG TAATGTAGCT GCTGAAGGGT GTGGGCATGA GCTCTGTGTA 
AGATGTGCGC TGTATCTTTG CTCAACAAGC AACATTCCTT CGGAAATGGT GGGCCCACCT 
GGCTCCATTC CATGTCCTCT TTGCAGACAT GGCATTGTAT CTTTCGTTAA ATTGCCTGGT 
TACCCAGCAA AAGAAATGAA ACTTCCTTTG TCCCTTGGCC TCTGTACTCC ATGTATGCTC 
CACTCCCGTG AAACAGATGG ACAATCCCCA GCACGTGTGC CAGAGATCCG AAAGAATCGT 
GTGGCTTCAG TTTCTTCTGA TTTCATGTGT CCAGTTACTT GTAGCCCATT TCCTTCTGTT 
GCAATCCCTT TATGCACCTG CAATGATGGC CCATGCCCAT CTTTTGAACC TCGAACTGTG 
GAAACTCGAG ATGATTCCCC CCGACGTTCA CAAACAACAT CTGTAGTCCA GGATAAAATT 
GAAGGGCCAA GACTAGAGAA AACAAGCTGT TCAGGGATGA TGTTTTGGGG TAGAAGAAGC 
TGCAGCAGGG AGCACCAGTG CAATTCAGAA ATAAATGCAT GA