| Gene Symbol | LOC107948941 |
| Entrez Gene ID | 107948941 |
| Full Name | omega-3 fatty acid desaturase, chloroplastic-like |
| Synonyms | FAD78-1A |
| Gene Type | protein-coding |
| Organism | Gossypium hirsutum(cotton) |
ORF » Species Summary » Gossypium hirsutum » LOC107948941 cDNA ORF clone
| Gene Symbol | LOC107948941 |
| Entrez Gene ID | 107948941 |
| Full Name | omega-3 fatty acid desaturase, chloroplastic-like |
| Synonyms | FAD78-1A |
| Gene Type | protein-coding |
| Organism | Gossypium hirsutum(cotton) |
| mRNA | Protein | Name |
|---|---|---|
| XM_016883611.1 | XP_016739100.1 | omega-3 fatty acid desaturase, chloroplastic-like |
| NM_001327553.1 | NP_001314482.1 | omega-3 fatty acid desaturase, chloroplastic-like |
Genome-wide analysis of the omega-3 fatty acid desaturase gene family in Gossypium.
Yurchenko OP, Park S, Ilut DC, Inmon JJ, Millhollon JC, Liechty Z, Page JT, Jenks MA, Chapman KD, Udall JA, Gore MA, Dyer JM
BMC plant biology14312(2014 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC107948941 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107948941 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OGo68591 | |
| Clone ID Related Accession (Same CDS sequence) | XM_016883611.1 , NM_001327553.1 | |
| Accession Version | NM_001327553.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1341bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-05-23 | |
| Organism | Gossypium hirsutum(cotton) | |
| Product | omega-3 fatty acid desaturase, chloroplastic-like | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from KF460134.1. ##Evidence-Data-START## Transcript exon combination :: KF460134.1, GALV01027300.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN02795973 [ECO:0000350] ##Evidence-Data-END## | |
1 | ATGGCGGGTT TCATTATATC TGGTTTAAAG CCTCTTCCTT GTATCTACGA TAGACCCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001314482.1 |
| CDS | 1..1341 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001327553.1 |
1 | ATGGCGGGTT TCATTATATC TGGTTTAAAG CCTCTTCCTT GTATCTACGA TAGACCCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OGo68591 | |
| Clone ID Related Accession (Same CDS sequence) | XM_016883611.1 , NM_001327553.1 | |
| Accession Version | XM_016883611.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1341bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-05-17 | |
| Organism | Gossypium hirsutum(cotton) | |
| Product | omega-3 fatty acid desaturase, chloroplastic-like | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030079.1) and transcript sequence (GALV01027300.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Gossypium hirsutum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases assembly gap :: added 324 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## | |
1 | ATGGCGGGTT TCATTATATC TGGTTTAAAG CCTCTTCCTT GTATCTACGA TAGACCCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_016739100.1 |
| CDS | 310..1650 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_016883611.1 |
1 | ATGGCGGGTT TCATTATATC TGGTTTAAAG CCTCTTCCTT GTATCTACGA TAGACCCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genome-wide analysis of the omega-3 fatty acid desaturase gene family in Gossypium. |