OPN5L1 cDNA ORF clone, Gallus gallus(chicken)

Gene
Clones
gRNAs

Summary

Gene Symbol	OPN5L1
Entrez Gene ID	421093
Full Name	opsin 5-like 1
Synonyms	COPN5L1
General protein information	Preferred Names opsin 5-like 1 Names opsin 5-like 1
Gene Type	protein-coding
Organism	Gallus gallus(chicken)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001310056.1	NP_001296985.1	opsin 5-like 1
NM_001310056.2	NP_001296985.1	opsin 5-like 1

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	LOC570397	XP_698966.4
Xenopus tropicalis (tropical clawed frog)	LOC100495259	XP_002934176.1
Gallus gallus (chicken)	COPN5L1	XP_419178.3

Gene Ontology
Bibliography

Related articles in PubMed

Expression patterns of the opsin 5-related genes in the developing chicken retina.
Tomonari S, Migita K, Takagi A, Noji S, Ohuchi H
Developmental dynamics : an official publication of the American Association of Anatomists237(7)1910-22(2008 Jul)

Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index.
Carre W, Wang X, Porter TE, Nys Y, Tang J, Bernberg E, Morgan R, Burnside J, Aggrey SE, Simon J, Cogburn LA
Physiological genomics25(3)514-24(2006 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following OPN5L1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the OPN5L1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OGa05194	NM_001310056.2 Latest version!	Gallus gallus opsin 5-like 1 (OPN5L1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
View Old Accession Versions >>
OGa05194	NM_001310056.1	Gallus gallus opsin 5-like 1 (OPN5L1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

OPN5L1 ( NM_001310056.1 ) cDNA ORF clone, Gallus gallus(chicken) -> NP_001296985.1 Gallus gallus opsin 5-like 1 (OPN5L1), mRNA.

Price & Availability↑

CloneID	OGa05194
Clone ID Related Accession (Same CDS sequence)	NM_001310056.1 , NM_001310056.2
Accession Version	NM_001310056.1	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-04-23
Organism	Gallus gallus(Chicken)
Product	opsin 5-like 1
Comment	VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AB368181.2 and BI393801.1. On Jun 25, 2015 this sequence version replaced XM_419178.4. ##Evidence-Data-START## Transcript exon combination :: AB368181.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2201368, SAMEA2201375 [ECO:0000348] ##Evidence-Data-END##

ATGGACCCAT CTTTTGCTAA TTCAACATTC CAGTCCAAAA TAACAGAAGC AGCTGATATT 
GTTGTTGGAA CATGCTATAT GGTCTTCGGA ATATGCTCCT TGTGTGGGAA CAGTATTCTC 
CTATATATCT CCTACAAGAA AAAACATTTG TTGAAACCAG CAGAATACTT CATTATTAAT 
CTTGCCATCA GTGACCTTGC AATGACACTG ACACTGTACC CACTAGCTGT AACCTCCAGC 
CTTTCGCACA GGTGGTTGTA TGGGAAACAC ATTTGCCTGT TCTATGCATT CTGTGGGCTA 
TTCTTTGGGA TCTGCAGTCT CTCAACACTG ACATTACTGA GTGTTGTGTG CTGCCTCAAA 
ATTTGCTTTC CAGCTTATGG CAACAGGTTC AGGAGAAAAC ATGGACAAAT ATTGATAGCC 
TGTGCTTGGA CCTATGCAGC AATATTTGCC TGTTCACCCC TTGCTCACTG GGGAGAATAT 
GGAGAGGAGC CCTATGGCAC AGCTTGCTGC ATTGACTGGC AATCCACCAA CGTAGACGTC 
ATGTCCATGT CTTACACTGT CGTTCTCTTT GTTCTCTGTT TTATTCTCCC CTGTGGAGTA 
ATTGTCACTT CCTACTCACT TATTCTGGTA ACTGTGAAAG AATCCAGGAA AGCTGTGGAG 
CAGCATGTCT CTGGTCCCAC CAGGATAAAC AACGTGCAAA CCATTACTGC CAAGCTGAGT 
ATTGCTGTGT GCATTGGATT TTTTGCTGCT TGGAGCCCTT ACGCCATCAT TGCCATGTGG 
GCAGCTTTCG GATCGATAGA TAAGATTCCT CCTTTAGCCT TTGCTATTCC AGCTGTCTTC 
GCAAAGTCCT CCACTCTCTA CAATCCCATT ATCCATCTTC TTCTGAAGCC CAATTTCCGA 
AGTAACATTG CCAAAGATTT CACAGTCATT CAACAGTTAT GTGTCAGGTG TTGTTTTTGT 
GTCAAGGAGC TGCAGACCTA CAGATCAACT TTCAACACTG GCTTGAGAAC ATTTAAGGGC 
AAAAATGAAT CCAGCTGTAA TGCTCTTCCG ATTATGGAAG GATGTTCTTA TTTTCCCTCT 
GAAAAGGGCA GTCATACTTT TGAATGCTTT AAAAGCTATC CAAACTGCTT CCAGGAGAGG 
TTAAGCACTA TGGGATGCCA CCTTCAAGAC TGCGAGTCTT TGGAAAATGA CCTCCAAGTA 
GAAGTGACAC AGGGCAGTAG GAATTCAATG AAGGTTGTTG AACAGGAAGA AAAAAGCACT 
GAACTTGATA ACTTGGAAAT CACCTTGGAA GCAGTACCTG TGAGCTGTAC ATTTACAGAC 
CTTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001296985.1
CDS	48..1373
Translation	MDPSFANSTFQSKITEAADIVVGTCYMVFGICSLCGNSILLYISYKKKHLLKPAEYFIINLAISDLAMTLTLYPLAVTSSLSHRWLYGKHICLFYAFCGLFFGICSLSTLTLLSVVCCLKICFPAYGNRFRRKHGQILIACAWTYAAIFACSPLAHWGEYGEEPYGTACCIDWQSTNVDVMSMSYTVVLFVLCFILPCGVIVTSYSLILVTVKESRKAVEQHVSGPTRINNVQTITAKLSIAVCIGFFAAWSPYAIIAMWAAFGSIDKIPPLAFAIPAVFAKSSTLYNPIIHLLLKPNFRSNIAKDFTVIQQLCVRCCFCVKELQTYRSTFNTGLRTFKGKNESSCNALPIMEGCSYFPSEKGSHTFECFKSYPNCFQERLSTMGCHLQDCESLENDLQVEVTQGSRNSMKVVEQEEKSTELDNLEITLEAVPVSCTFTDL

Target ORF information:

RefSeq Version	NM_001310056.1
Organism	Gallus gallus(Chicken)
Definition	Gallus gallus opsin 5-like 1 (OPN5L1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001310056.1

ORF Insert Sequence:

ATGGACCCAT CTTTTGCTAA TTCAACATTC CAGTCCAAAA TAACAGAAGC AGCTGATATT 
GTTGTTGGAA CATGCTATAT GGTCTTCGGA ATATGCTCCT TGTGTGGGAA CAGTATTCTC 
CTATATATCT CCTACAAGAA AAAACATTTG TTGAAACCAG CAGAATACTT CATTATTAAT 
CTTGCCATCA GTGACCTTGC AATGACACTG ACACTGTACC CACTAGCTGT AACCTCCAGC 
CTTTCGCACA GGTGGTTGTA TGGGAAACAC ATTTGCCTGT TCTATGCATT CTGTGGGCTA 
TTCTTTGGGA TCTGCAGTCT CTCAACACTG ACATTACTGA GTGTTGTGTG CTGCCTCAAA 
ATTTGCTTTC CAGCTTATGG CAACAGGTTC AGGAGAAAAC ATGGACAAAT ATTGATAGCC 
TGTGCTTGGA CCTATGCAGC AATATTTGCC TGTTCACCCC TTGCTCACTG GGGAGAATAT 
GGAGAGGAGC CCTATGGCAC AGCTTGCTGC ATTGACTGGC AATCCACCAA CGTAGACGTC 
ATGTCCATGT CTTACACTGT CGTTCTCTTT GTTCTCTGTT TTATTCTCCC CTGTGGAGTA 
ATTGTCACTT CCTACTCACT TATTCTGGTA ACTGTGAAAG AATCCAGGAA AGCTGTGGAG 
CAGCATGTCT CTGGTCCCAC CAGGATAAAC AACGTGCAAA CCATTACTGC CAAGCTGAGT 
ATTGCTGTGT GCATTGGATT TTTTGCTGCT TGGAGCCCTT ACGCCATCAT TGCCATGTGG 
GCAGCTTTCG GATCGATAGA TAAGATTCCT CCTTTAGCCT TTGCTATTCC AGCTGTCTTC 
GCAAAGTCCT CCACTCTCTA CAATCCCATT ATCCATCTTC TTCTGAAGCC CAATTTCCGA 
AGTAACATTG CCAAAGATTT CACAGTCATT CAACAGTTAT GTGTCAGGTG TTGTTTTTGT 
GTCAAGGAGC TGCAGACCTA CAGATCAACT TTCAACACTG GCTTGAGAAC ATTTAAGGGC 
AAAAATGAAT CCAGCTGTAA TGCTCTTCCG ATTATGGAAG GATGTTCTTA TTTTCCCTCT 
GAAAAGGGCA GTCATACTTT TGAATGCTTT AAAAGCTATC CAAACTGCTT CCAGGAGAGG 
TTAAGCACTA TGGGATGCCA CCTTCAAGAC TGCGAGTCTT TGGAAAATGA CCTCCAAGTA 
GAAGTGACAC AGGGCAGTAG GAATTCAATG AAGGTTGTTG AACAGGAAGA AAAAAGCACT 
GAACTTGATA ACTTGGAAAT CACCTTGGAA GCAGTACCTG TGAGCTGTAC ATTTACAGAC 
CTTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

OPN5L1 ( NM_001310056.2 ) cDNA ORF clone, Gallus gallus(chicken) -> NP_001296985.1 Gallus gallus opsin 5-like 1 (OPN5L1), mRNA.

Price & Availability↑

CloneID	OGa05194
Clone ID Related Accession (Same CDS sequence)	NM_001310056.1 , NM_001310056.2
Accession Version	NM_001310056.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-12-29
Organism	Gallus gallus(chicken)
Product	opsin 5-like 1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AADN05000031.1. On Jan 3, 2018 this sequence version replaced NM_001310056.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AB368181.3, LC360414.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2201368, SAMEA2201375 [ECO:0000348] ##Evidence-Data-END##

ATGGACCCAT CTTTTGCTAA TTCAACATTC CAGTCCAAAA TAACAGAAGC AGCTGATATT 
GTTGTTGGAA CATGCTATAT GGTCTTCGGA ATATGCTCCT TGTGTGGGAA CAGTATTCTC 
CTATATATCT CCTACAAGAA AAAACATTTG TTGAAACCAG CAGAATACTT CATTATTAAT 
CTTGCCATCA GTGACCTTGC AATGACACTG ACACTGTACC CACTAGCTGT AACCTCCAGC 
CTTTCGCACA GGTGGTTGTA TGGGAAACAC ATTTGCCTGT TCTATGCATT CTGTGGGCTA 
TTCTTTGGGA TCTGCAGTCT CTCAACACTG ACATTACTGA GTGTTGTGTG CTGCCTCAAA 
ATTTGCTTTC CAGCTTATGG CAACAGGTTC AGGAGAAAAC ATGGACAAAT ATTGATAGCC 
TGTGCTTGGA CCTATGCAGC AATATTTGCC TGTTCACCCC TTGCTCACTG GGGAGAATAT 
GGAGAGGAGC CCTATGGCAC AGCTTGCTGC ATTGACTGGC AATCCACCAA CGTAGACGTC 
ATGTCCATGT CTTACACTGT CGTTCTCTTT GTTCTCTGTT TTATTCTCCC CTGTGGAGTA 
ATTGTCACTT CCTACTCACT TATTCTGGTA ACTGTGAAAG AATCCAGGAA AGCTGTGGAG 
CAGCATGTCT CTGGTCCCAC CAGGATAAAC AACGTGCAAA CCATTACTGC CAAGCTGAGT 
ATTGCTGTGT GCATTGGATT TTTTGCTGCT TGGAGCCCTT ACGCCATCAT TGCCATGTGG 
GCAGCTTTCG GATCGATAGA TAAGATTCCT CCTTTAGCCT TTGCTATTCC AGCTGTCTTC 
GCAAAGTCCT CCACTCTCTA CAATCCCATT ATCCATCTTC TTCTGAAGCC CAATTTCCGA 
AGTAACATTG CCAAAGATTT CACAGTCATT CAACAGTTAT GTGTCAGGTG TTGTTTTTGT 
GTCAAGGAGC TGCAGACCTA CAGATCAACT TTCAACACTG GCTTGAGAAC ATTTAAGGGC 
AAAAATGAAT CCAGCTGTAA TGCTCTTCCG ATTATGGAAG GATGTTCTTA TTTTCCCTCT 
GAAAAGGGCA GTCATACTTT TGAATGCTTT AAAAGCTATC CAAACTGCTT CCAGGAGAGG 
TTAAGCACTA TGGGATGCCA CCTTCAAGAC TGCGAGTCTT TGGAAAATGA CCTCCAAGTA 
GAAGTGACAC AGGGCAGTAG GAATTCAATG AAGGTTGTTG AACAGGAAGA AAAAAGCACT 
GAACTTGATA ACTTGGAAAT CACCTTGGAA GCAGTACCTG TGAGCTGTAC ATTTACAGAC 
CTTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001296985.1
CDS	317..1642
Translation	MDPSFANSTFQSKITEAADIVVGTCYMVFGICSLCGNSILLYISYKKKHLLKPAEYFIINLAISDLAMTLTLYPLAVTSSLSHRWLYGKHICLFYAFCGLFFGICSLSTLTLLSVVCCLKICFPAYGNRFRRKHGQILIACAWTYAAIFACSPLAHWGEYGEEPYGTACCIDWQSTNVDVMSMSYTVVLFVLCFILPCGVIVTSYSLILVTVKESRKAVEQHVSGPTRINNVQTITAKLSIAVCIGFFAAWSPYAIIAMWAAFGSIDKIPPLAFAIPAVFAKSSTLYNPIIHLLLKPNFRSNIAKDFTVIQQLCVRCCFCVKELQTYRSTFNTGLRTFKGKNESSCNALPIMEGCSYFPSEKGSHTFECFKSYPNCFQERLSTMGCHLQDCESLENDLQVEVTQGSRNSMKVVEQEEKSTELDNLEITLEAVPVSCTFTDL

Target ORF information:

RefSeq Version	NM_001310056.2
Organism	Gallus gallus(chicken)
Definition	Gallus gallus opsin 5-like 1 (OPN5L1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001310056.2

ORF Insert Sequence:

ATGGACCCAT CTTTTGCTAA TTCAACATTC CAGTCCAAAA TAACAGAAGC AGCTGATATT 
GTTGTTGGAA CATGCTATAT GGTCTTCGGA ATATGCTCCT TGTGTGGGAA CAGTATTCTC 
CTATATATCT CCTACAAGAA AAAACATTTG TTGAAACCAG CAGAATACTT CATTATTAAT 
CTTGCCATCA GTGACCTTGC AATGACACTG ACACTGTACC CACTAGCTGT AACCTCCAGC 
CTTTCGCACA GGTGGTTGTA TGGGAAACAC ATTTGCCTGT TCTATGCATT CTGTGGGCTA 
TTCTTTGGGA TCTGCAGTCT CTCAACACTG ACATTACTGA GTGTTGTGTG CTGCCTCAAA 
ATTTGCTTTC CAGCTTATGG CAACAGGTTC AGGAGAAAAC ATGGACAAAT ATTGATAGCC 
TGTGCTTGGA CCTATGCAGC AATATTTGCC TGTTCACCCC TTGCTCACTG GGGAGAATAT 
GGAGAGGAGC CCTATGGCAC AGCTTGCTGC ATTGACTGGC AATCCACCAA CGTAGACGTC 
ATGTCCATGT CTTACACTGT CGTTCTCTTT GTTCTCTGTT TTATTCTCCC CTGTGGAGTA 
ATTGTCACTT CCTACTCACT TATTCTGGTA ACTGTGAAAG AATCCAGGAA AGCTGTGGAG 
CAGCATGTCT CTGGTCCCAC CAGGATAAAC AACGTGCAAA CCATTACTGC CAAGCTGAGT 
ATTGCTGTGT GCATTGGATT TTTTGCTGCT TGGAGCCCTT ACGCCATCAT TGCCATGTGG 
GCAGCTTTCG GATCGATAGA TAAGATTCCT CCTTTAGCCT TTGCTATTCC AGCTGTCTTC 
GCAAAGTCCT CCACTCTCTA CAATCCCATT ATCCATCTTC TTCTGAAGCC CAATTTCCGA 
AGTAACATTG CCAAAGATTT CACAGTCATT CAACAGTTAT GTGTCAGGTG TTGTTTTTGT 
GTCAAGGAGC TGCAGACCTA CAGATCAACT TTCAACACTG GCTTGAGAAC ATTTAAGGGC 
AAAAATGAAT CCAGCTGTAA TGCTCTTCCG ATTATGGAAG GATGTTCTTA TTTTCCCTCT 
GAAAAGGGCA GTCATACTTT TGAATGCTTT AAAAGCTATC CAAACTGCTT CCAGGAGAGG 
TTAAGCACTA TGGGATGCCA CCTTCAAGAC TGCGAGTCTT TGGAAAATGA CCTCCAAGTA 
GAAGTGACAC AGGGCAGTAG GAATTCAATG AAGGTTGTTG AACAGGAAGA AAAAAGCACT 
GAACTTGATA ACTTGGAAAT CACCTTGGAA GCAGTACCTG TGAGCTGTAC ATTTACAGAC 
CTTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Expression patterns of the opsin 5-related genes in the developing chicken retina.
Developmental dynamics : an official publication of the American Association of Anatomists237(7)1910-22(2008 Jul)
Tomonari S,Migita K,Takagi A,Noji S,Ohuchi H

Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index.
Physiological genomics25(3)514-24(2006 May)
Carre W,Wang X,Porter TE,Nys Y,Tang J,Bernberg E,Morgan R,Burnside J,Aggrey SE,Simon J,Cogburn LA