LOC105927135 cDNA ORF clone, Fundulus heteroclitus(mummichog)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105927135
Entrez Gene ID	105927135
Full Name	interferon regulatory factor 6
Gene Type	protein-coding
Organism	Fundulus heteroclitus(mummichog)

mRNA and Protein(s)

mRNA	Protein	Name
XM_012863761.1	XP_012719215.1	interferon regulatory factor 6-like
XM_021317154.1	XP_021172829.1	interferon regulatory factor 6

Pathways from BioSystems
Gene Ontology

The following LOC105927135 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105927135 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFu110400	XM_012863761.1 Latest version!	Fundulus heteroclitus interferon regulatory factor 6-like (LOC105927135), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OFu137160	XM_021317154.1 Latest version!	Fundulus heteroclitus interferon regulatory factor 6 (LOC105927135), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105927135 ( XM_012863761.1 ) cDNA ORF clone, Fundulus heteroclitus(mummichog) -> XP_012719215.1 Fundulus heteroclitus interferon regulatory factor 6-like (LOC105927135), mRNA.

Price & Availability↑

CloneID	OFu110400
Clone ID Related Accession (Same CDS sequence)	XM_012863761.1
Accession Version	XM_012863761.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1158bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-06-14
Organism	Fundulus heteroclitus(Mummichog)
Product	interferon regulatory factor 6-like
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012234276.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Fundulus heteroclitus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAATCCCT TAAAGATATA CGACGTCTGC GACATCCCAC AGCTCAACGC TCCTTCAGAT 
GCAGGATCTC GCACTCCTTA TGATGAGGAC TTTGGAGAGG AAGACGTTCC AGACACGCCA 
GAGTCTCTTC CTCCATATCC ATCCAACGGA CCCAGTCCTC CTCCACTCAA TATGTGGTCT 
CCGATGGGCT CAGACTCATC CATGCAGCCT CCCAGCTGTC CACCTTCCAA TGAGGTCTGG 
CCCAAAGAGG AGCCTGTAAA AATCTGGCCC AAAGAGGAGC CCGTAGATGT AGAGATGCCC 
CCCACGAACC TGGATGAACT GCCCCCTGCC CCTCTGCCTG ACCCCATCCT GCATCCCACT 
CCTCTCCCTG ATGCCTTCTT TGCCTCTCCG GAAATGTGGA TCAGCTCTCT GCCAATGACA 
GACCTAGAGG TCCAGTTTCT GTACAGAGGG AAGGAGATGT GTCCCACCGT GACGGTGAGC 
AACCCGCAGG GCTGCAGGCT GTTCTACGGG GACCTGGGGC CCATGGTCAA CCAGGAGGAG 
CTGTTCGGCC CCGTCAACCT GGCACAGCTG CGCTTCCCCA CCACGGAGCA CATCACCAAC 
GACAAGCAGA GGATCTTCAC CAACCGTCTG CTGGATGTGA TGGACCGAGG TCTGATCCTG 
GAGGTCAGCG GACACGATAT CTACGCAGTG CGCCTCTGTC AGTGTAAGGT GTACTGGTCC 
GGCCCCTGCG CCCCAAACCC GGCGGCGCCA AATCTCATAG AGCGGCAGAA GAAGGTCAAA 
CTCTTTTGTC TGGAGTCATT TCTCAGCGGT GTGGTAGCTC ATCAGCGTGG CCAGTCAAGC 
ACCCCTCCTC GTTTTGAAAT CAGCCTCTGC TTCGGGGAGG AGTGGCCCGA TGGAAGACCC 
ACGGAGCGAA AACTCATCAT GGTCCAGGTC ATACCTGTGG TGGCTCGGAT GATCAGCGAG 
ATGTTTTCCG GAGACAACAA CCTTTCTTTT GACAGCAGCA GCGTTCGCCT GCAGATTTCA 
ATCCCGGATA TAAAAGACAA TATAGTGACC CACCTGAAGC AGCTGTACTG CCTGCTGCAG 
AACCACCAGG GCCAGGATGC GTGGGCTCTG CCCACCAACG CCGGCCTGAA CATTGCCCAG 
GCTCTGCAGA CTCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012719215.1
CDS	91..1248
Translation	MNPLKIYDVCDIPQLNAPSDAGSRTPYDEDFGEEDVPDTPESLPPYPSNGPSPPPLNMWSPMGSDSSMQPPSCPPSNEVWPKEEPVKIWPKEEPVDVEMPPTNLDELPPAPLPDPILHPTPLPDAFFASPEMWISSLPMTDLEVQFLYRGKEMCPTVTVSNPQGCRLFYGDLGPMVNQEELFGPVNLAQLRFPTTEHITNDKQRIFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPAAPNLIERQKKVKLFCLESFLSGVVAHQRGQSSTPPRFEISLCFGEEWPDGRPTERKLIMVQVIPVVARMISEMFSGDNNLSFDSSSVRLQISIPDIKDNIVTHLKQLYCLLQNHQGQDAWALPTNAGLNIAQALQTQ

Target ORF information:

RefSeq Version	XM_012863761.1
Organism	Fundulus heteroclitus(Mummichog)
Definition	Fundulus heteroclitus interferon regulatory factor 6-like (LOC105927135), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012863761.1

ORF Insert Sequence:

ATGAATCCCT TAAAGATATA CGACGTCTGC GACATCCCAC AGCTCAACGC TCCTTCAGAT 
GCAGGATCTC GCACTCCTTA TGATGAGGAC TTTGGAGAGG AAGACGTTCC AGACACGCCA 
GAGTCTCTTC CTCCATATCC ATCCAACGGA CCCAGTCCTC CTCCACTCAA TATGTGGTCT 
CCGATGGGCT CAGACTCATC CATGCAGCCT CCCAGCTGTC CACCTTCCAA TGAGGTCTGG 
CCCAAAGAGG AGCCTGTAAA AATCTGGCCC AAAGAGGAGC CCGTAGATGT AGAGATGCCC 
CCCACGAACC TGGATGAACT GCCCCCTGCC CCTCTGCCTG ACCCCATCCT GCATCCCACT 
CCTCTCCCTG ATGCCTTCTT TGCCTCTCCG GAAATGTGGA TCAGCTCTCT GCCAATGACA 
GACCTAGAGG TCCAGTTTCT GTACAGAGGG AAGGAGATGT GTCCCACCGT GACGGTGAGC 
AACCCGCAGG GCTGCAGGCT GTTCTACGGG GACCTGGGGC CCATGGTCAA CCAGGAGGAG 
CTGTTCGGCC CCGTCAACCT GGCACAGCTG CGCTTCCCCA CCACGGAGCA CATCACCAAC 
GACAAGCAGA GGATCTTCAC CAACCGTCTG CTGGATGTGA TGGACCGAGG TCTGATCCTG 
GAGGTCAGCG GACACGATAT CTACGCAGTG CGCCTCTGTC AGTGTAAGGT GTACTGGTCC 
GGCCCCTGCG CCCCAAACCC GGCGGCGCCA AATCTCATAG AGCGGCAGAA GAAGGTCAAA 
CTCTTTTGTC TGGAGTCATT TCTCAGCGGT GTGGTAGCTC ATCAGCGTGG CCAGTCAAGC 
ACCCCTCCTC GTTTTGAAAT CAGCCTCTGC TTCGGGGAGG AGTGGCCCGA TGGAAGACCC 
ACGGAGCGAA AACTCATCAT GGTCCAGGTC ATACCTGTGG TGGCTCGGAT GATCAGCGAG 
ATGTTTTCCG GAGACAACAA CCTTTCTTTT GACAGCAGCA GCGTTCGCCT GCAGATTTCA 
ATCCCGGATA TAAAAGACAA TATAGTGACC CACCTGAAGC AGCTGTACTG CCTGCTGCAG 
AACCACCAGG GCCAGGATGC GTGGGCTCTG CCCACCAACG CCGGCCTGAA CATTGCCCAG 
GCTCTGCAGA CTCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC105927135 ( XM_021317154.1 ) cDNA ORF clone, Fundulus heteroclitus(mummichog) -> XP_021172829.1 Fundulus heteroclitus interferon regulatory factor 6 (LOC105927135), mRNA.

Price & Availability↑

CloneID	OFu137160
Clone ID Related Accession (Same CDS sequence)	XM_021317154.1
Accession Version	XM_021317154.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1758bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-05-31
Organism	Fundulus heteroclitus(mummichog)
Product	interferon regulatory factor 6
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012234276.1) and transcript sequences (GCES01051378.1 and GCES01051379.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Fundulus heteroclitus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 499 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGGCGGTCA CCCCTCGACG CGTCCGCCTC AAGCCGTGGC TGGTCGCCCA GGTGGACAGT 
GGACGGTACC CGGGTCTGGT CTGGATGGAC AGGGACGCCA TGCGCTTCCA GATCCCCTGG 
AAACACGCCA CTAGACACAC GCCTCAACAC GAGGATGAGG ATACCATATT TAAGGCCTGG 
GCTGTGGAGA CCGGGAAGTT TCAGGAGGGA GTTGATGAAC CTGATCCTGC CAAGTGGAAA 
GCTCAGCTGC GATGTGCCCT GAACAAAAGC CGGGAATTCA ATCTCATCTA TGACGGCACC 
AAGGAAGTCC CCATGAATCC CTTAAAGATA TACGACGTCT GCGACATCCC ACAGCTCAAC 
AATAACCAAG CTCCTTCAGA TGCAGGATCT CGCACTCCTT ATGATGAGGA CTTTGGAGAG 
GAAGACGTTC CAGACACGCC AGAGTCTCTT CCTCCATATC CATCCAACGG ACCCAGTCCT 
CCTCCACTCA ATATGTGGTC TCCGATGGGC TCAGACTCAT CCATGCAGCC TCCCAGCTGT 
CCACCTTCCA ATGAGGTCTG GCCCAAAGAG GAGCCTGTAA AAATCTGGCC CAAAGAGGAG 
CCCGTAGATG TAGAGATGCC CCCCACGAAC CTGGATGAAC TGCCCCCTGC CCCTCTGCCT 
GACCCCATCC TGCATCCCAC TCCTCTCCCT GATGCCTTCT TTGCCTCTCC GGAAATGTGG 
ATCAGCTCTC TGCCAATGAC AGACCTAGAG GTCCAGTTTC TGTACAGAGG GNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNGTCTGG 
CCCAAAGAGG AGCCTGTAAA AATCTGGCCC AAAGAGGAGC CCGTAGATGT AGAGATGCCC 
CCCACGAACC TGGATGAATT GCCCCCTGCC CCTCTGCCTG ACCCCATCCT GCATCCCACT 
CCTCTTCCTG ATGCCTTCTT TGCCTCTCCG GAAATGTGGA TCAGCTCTCT GCCAATGACA 
GACCTAGAGG TCCAGTTTCT GTACAGAGGG AAGGAGATGT GTCCCACCGT GACGGTGAGC 
AACCCGCAGG GCTGCAGGCT GTTCTACGGG GACCTGGGGC CCATGGTCAA CCAGGAGGAG 
CTGTTCGGCC CCGTCAACCT GGCACAGCTG CGCTTCCCCA CCACGGAGCA CATCACCAAC 
GACAAGCAGA GGATCTTCAC CAACCGTCTG CTGGATGTGA TGGACCGAGG TCTGATCCTG 
GAGGTCAGCG GACACGATAT CTACGCAGTG CGCCTCTGTC AGTGTAAGGT GTACTGGTCC 
GGCCCCTGCG CCCCAAACCC GGCGGCGCCA AATCTCATAG AGCGGCAGAA GAAGGTCAAA 
CTCTTTTGTC TGGAGTCATT TCTCAGCGGT GTGGTAGCTC ATCAGCGTGG CCAGTCAAGC 
ACCCCTCCTC GTTTTGAAAT CAGCCTCTGC TTCGGGGAGG AGTGGCCCGA TGGAAGACCC 
ACGGAGCGAA AACTCATCAT GGTCCAGGTC ATACCTGTGG TGGCTCGGAT GATCAGCGAG 
ATGTTTTCCG GAGACAACAA CCTTTCTTTT GACAGCAGCA GCGTTCGCCT GCAGATTTCA 
ATCCCGGATA TAAAAGACAA TATAGTGACC CACCTGAAGC AGCTGTACTG CCTGCTGCAG 
AACCACCAGG GCCAGGATGC GTGGGCTCTG CCCACCAACG CCGGCCTGAA CATTGCCCAG 
GCTCTGCAGA CTCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021172829.1
CDS	47..1804
Translation	MAVTPRRVRLKPWLVAQVDSGRYPGLVWMDRDAMRFQIPWKHATRHTPQHEDEDTIFKAWAVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMNPLKIYDVCDIPQLNNNQAPSDAGSRTPYDEDFGEEDVPDTPESLPPYPSNGPSPPPLNMWSPMGSDSSMQPPSCPPSNEVWPKEEPVKIWPKEEPVDVEMPPTNLDELPPAPLPDPILHPTPLPDAFFASPEMWISSLPMTDLEVQFLYRGnullnullnullnullnullnullnullnullnullnullnullnullnullnullnullnullnullnullnullnullnullVWPKEEPVKIWPKEEPVDVEMPPTNLDELPPAPLPDPILHPTPLPDAFFASPEMWISSLPMTDLEVQFLYRGKEMCPTVTVSNPQGCRLFYGDLGPMVNQEELFGPVNLAQLRFPTTEHITNDKQRIFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPAAPNLIERQKKVKLFCLESFLSGVVAHQRGQSSTPPRFEISLCFGEEWPDGRPTERKLIMVQVIPVVARMISEMFSGDNNLSFDSSSVRLQISIPDIKDNIVTHLKQLYCLLQNHQGQDAWALPTNAGLNIAQALQTQ

Target ORF information:

RefSeq Version	XM_021317154.1
Organism	Fundulus heteroclitus(mummichog)
Definition	Fundulus heteroclitus interferon regulatory factor 6 (LOC105927135), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021317154.1

ORF Insert Sequence:

ATGGCGGTCA CCCCTCGACG CGTCCGCCTC AAGCCGTGGC TGGTCGCCCA GGTGGACAGT 
GGACGGTACC CGGGTCTGGT CTGGATGGAC AGGGACGCCA TGCGCTTCCA GATCCCCTGG 
AAACACGCCA CTAGACACAC GCCTCAACAC GAGGATGAGG ATACCATATT TAAGGCCTGG 
GCTGTGGAGA CCGGGAAGTT TCAGGAGGGA GTTGATGAAC CTGATCCTGC CAAGTGGAAA 
GCTCAGCTGC GATGTGCCCT GAACAAAAGC CGGGAATTCA ATCTCATCTA TGACGGCACC 
AAGGAAGTCC CCATGAATCC CTTAAAGATA TACGACGTCT GCGACATCCC ACAGCTCAAC 
AATAACCAAG CTCCTTCAGA TGCAGGATCT CGCACTCCTT ATGATGAGGA CTTTGGAGAG 
GAAGACGTTC CAGACACGCC AGAGTCTCTT CCTCCATATC CATCCAACGG ACCCAGTCCT 
CCTCCACTCA ATATGTGGTC TCCGATGGGC TCAGACTCAT CCATGCAGCC TCCCAGCTGT 
CCACCTTCCA ATGAGGTCTG GCCCAAAGAG GAGCCTGTAA AAATCTGGCC CAAAGAGGAG 
CCCGTAGATG TAGAGATGCC CCCCACGAAC CTGGATGAAC TGCCCCCTGC CCCTCTGCCT 
GACCCCATCC TGCATCCCAC TCCTCTCCCT GATGCCTTCT TTGCCTCTCC GGAAATGTGG 
ATCAGCTCTC TGCCAATGAC AGACCTAGAG GTCCAGTTTC TGTACAGAGG GNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNGTCTGG 
CCCAAAGAGG AGCCTGTAAA AATCTGGCCC AAAGAGGAGC CCGTAGATGT AGAGATGCCC 
CCCACGAACC TGGATGAATT GCCCCCTGCC CCTCTGCCTG ACCCCATCCT GCATCCCACT 
CCTCTTCCTG ATGCCTTCTT TGCCTCTCCG GAAATGTGGA TCAGCTCTCT GCCAATGACA 
GACCTAGAGG TCCAGTTTCT GTACAGAGGG AAGGAGATGT GTCCCACCGT GACGGTGAGC 
AACCCGCAGG GCTGCAGGCT GTTCTACGGG GACCTGGGGC CCATGGTCAA CCAGGAGGAG 
CTGTTCGGCC CCGTCAACCT GGCACAGCTG CGCTTCCCCA CCACGGAGCA CATCACCAAC 
GACAAGCAGA GGATCTTCAC CAACCGTCTG CTGGATGTGA TGGACCGAGG TCTGATCCTG 
GAGGTCAGCG GACACGATAT CTACGCAGTG CGCCTCTGTC AGTGTAAGGT GTACTGGTCC 
GGCCCCTGCG CCCCAAACCC GGCGGCGCCA AATCTCATAG AGCGGCAGAA GAAGGTCAAA 
CTCTTTTGTC TGGAGTCATT TCTCAGCGGT GTGGTAGCTC ATCAGCGTGG CCAGTCAAGC 
ACCCCTCCTC GTTTTGAAAT CAGCCTCTGC TTCGGGGAGG AGTGGCCCGA TGGAAGACCC 
ACGGAGCGAA AACTCATCAT GGTCCAGGTC ATACCTGTGG TGGCTCGGAT GATCAGCGAG 
ATGTTTTCCG GAGACAACAA CCTTTCTTTT GACAGCAGCA GCGTTCGCCT GCAGATTTCA 
ATCCCGGATA TAAAAGACAA TATAGTGACC CACCTGAAGC AGCTGTACTG CCTGCTGCAG 
AACCACCAGG GCCAGGATGC GTGGGCTCTG CCCACCAACG CCGGCCTGAA CATTGCCCAG 
GCTCTGCAGA CTCAGTGA