LOC109536383 cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC109536383
Entrez Gene ID	109536383
Full Name	UBX domain-containing protein 6
Gene Type	protein-coding
Organism	Dendroctonus ponderosae(mountain pine beetle)

mRNA and Protein(s)

mRNA	Protein	Name
XM_019902572.1	XP_019758131.1	UBX domain-containing protein 6
XM_019902571.1	XP_019758130.1	UBX domain-containing protein 6

Pathways from BioSystems
Gene Ontology

The following LOC109536383 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC109536383 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODe39778	XM_019902572.1 Latest version!	Dendroctonus ponderosae UBX domain-containing protein 6 (LOC109536383), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
ODe39778	XM_019902571.1 Latest version!	Dendroctonus ponderosae UBX domain-containing protein 6 (LOC109536383), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC109536383 ( XM_019902572.1 ) cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle) -> XP_019758131.1 Dendroctonus ponderosae UBX domain-containing protein 6 (LOC109536383), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODe39778
Clone ID Related Accession (Same CDS sequence)	XM_019902572.1 , XM_019902571.1
Accession Version	XM_019902572.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1335bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-01-09
Organism	Dendroctonus ponderosae(mountain pine beetle)
Product	UBX domain-containing protein 6
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017852012.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Dendroctonus ponderosae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTCGGAGA AAATAGCTGA TAAGGTGAAG AATTTCTTCC AAAAAGCGAA GGCCGATGCG 
AAGTTCAAAA AGGCAGGGCC TGGTCGAAAG CTCACCGAAT CGCCATCATC CTCCACATCC 
GCTGTGTCTT CTCGAAAGAA GGGCGAGTAT GTGCCCCCTC AAAGATCCAC CCCATCGGAC 
GTAACCAGAC AGTCTGCAGC TGCAGCATTG GCTCGCATGT CCGACCCGGA GAGAGGCACC 
AATACCAAAA TATCTTTGAG CACACTCCAG GACGTGGTTC GAAGGGAATT TGACTCCCGA 
AACACAGACG CCACTGAGGT GCCTTCAGGG CCAAAGCAAA CTGAATCGGA GGCGTCGCCT 
CATTTGGCTG TAAAAGGGGT GTACTTCAAA TGCCCATTTG TTAGCGACGA GATCTTAAGC 
AGAGAAGAGT GGAGGATAAA AATCAAGGAG TTCCTAATGA CGGCTTTAGA GCACGAGGCT 
GTTTTAACAA CCTGTTTGAT TATCTATTCT TGCAATTACA ACAGAACAAA GGTACAAGAC 
TGCGTGAACA TCCTCTGCAG ATACATCGAC AACATTATCG GCAATCCATC AGAGACGAAA 
TTTCACAGAA TCCGATGCTC CAACGCAGCA TTTGCCGATA AAGTCGTCCC AGTGCTTGGG 
GCCACCGAGT TCCTACATGC CGCCGGGTTT CGACAGCAAA AACTGGAACA CAATGGCGCA 
GAGGAGGACT TCTTGGTATG GTCCCAAGAA AATGTAGAAG GAATCGACAC ATTGGAGATT 
TTACGCGATG CCCTTAAGTC GGAAAACCGA ATAGAGTTGG AGTTGGACAG AAATACGCAA 
GTTTTAACTC CAGCGCAGGC GGCAGTCAAC TTAGACCTGC CGAAAGAGTT CTACGCTATA 
TCAGCCGAAG AAATCAAACG GGAACAACAA ACCAGATCTG AAGTAGCGGA AAAGCAATTG 
CAGCTAAGAA CCAAAGCGAT GAGGGAAAAG GAGGAACTGC GGGAGATACG AAAATACAAA 
TTTTCACTGA TCAGAATCAG ATTTCCCGAT GGCGTCTACT TACAAGGCAC CTTCTCCATT 
TATGAAAAGC TTGGCGATGT CTTCGATTTC GTCCGAGAGA ACTTGGAATT CGACGGTTTG 
CCATTTCTTC TAAATCTACC AACGGGCCAA AAGTTCGCGG AAAAAGACCT GGATGTCACG 
CTGGTTGATC TTCGGCTGGT TCCTGCCACC ATTCTGATTT TCCAATGGGA TCCAAAATTT 
GAGGAAGAAA TAAAAGCATC TGGTAATGTC ACTTATCTTA AACCAGAAGT TGTTCTGCTA 
ATGCAGCAGC TGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019758131.1
CDS	179..1513
Translation	MSEKIADKVKNFFQKAKADAKFKKAGPGRKLTESPSSSTSAVSSRKKGEYVPPQRSTPSDVTRQSAAAALARMSDPERGTNTKISLSTLQDVVRREFDSRNTDATEVPSGPKQTESEASPHLAVKGVYFKCPFVSDEILSREEWRIKIKEFLMTALEHEAVLTTCLIIYSCNYNRTKVQDCVNILCRYIDNIIGNPSETKFHRIRCSNAAFADKVVPVLGATEFLHAAGFRQQKLEHNGAEEDFLVWSQENVEGIDTLEILRDALKSENRIELELDRNTQVLTPAQAAVNLDLPKEFYAISAEEIKREQQTRSEVAEKQLQLRTKAMREKEELREIRKYKFSLIRIRFPDGVYLQGTFSIYEKLGDVFDFVRENLEFDGLPFLLNLPTGQKFAEKDLDVTLVDLRLVPATILIFQWDPKFEEEIKASGNVTYLKPEVVLLMQQL

Target ORF information:

RefSeq Version	XM_019902572.1
Organism	Dendroctonus ponderosae(mountain pine beetle)
Definition	Dendroctonus ponderosae UBX domain-containing protein 6 (LOC109536383), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019902572.1

ORF Insert Sequence:

ATGTCGGAGA AAATAGCTGA TAAGGTGAAG AATTTCTTCC AAAAAGCGAA GGCCGATGCG 
AAGTTCAAAA AGGCAGGGCC TGGTCGAAAG CTCACCGAAT CGCCATCATC CTCCACATCC 
GCTGTGTCTT CTCGAAAGAA GGGCGAGTAT GTGCCCCCTC AAAGATCCAC CCCATCGGAC 
GTAACCAGAC AGTCTGCAGC TGCAGCATTG GCTCGCATGT CCGACCCGGA GAGAGGCACC 
AATACCAAAA TATCTTTGAG CACACTCCAG GACGTGGTTC GAAGGGAATT TGACTCCCGA 
AACACAGACG CCACTGAGGT GCCTTCAGGG CCAAAGCAAA CTGAATCGGA GGCGTCGCCT 
CATTTGGCTG TAAAAGGGGT GTACTTCAAA TGCCCATTTG TTAGCGACGA GATCTTAAGC 
AGAGAAGAGT GGAGGATAAA AATCAAGGAG TTCCTAATGA CGGCTTTAGA GCACGAGGCT 
GTTTTAACAA CCTGTTTGAT TATCTATTCT TGCAATTACA ACAGAACAAA GGTACAAGAC 
TGCGTGAACA TCCTCTGCAG ATACATCGAC AACATTATCG GCAATCCATC AGAGACGAAA 
TTTCACAGAA TCCGATGCTC CAACGCAGCA TTTGCCGATA AAGTCGTCCC AGTGCTTGGG 
GCCACCGAGT TCCTACATGC CGCCGGGTTT CGACAGCAAA AACTGGAACA CAATGGCGCA 
GAGGAGGACT TCTTGGTATG GTCCCAAGAA AATGTAGAAG GAATCGACAC ATTGGAGATT 
TTACGCGATG CCCTTAAGTC GGAAAACCGA ATAGAGTTGG AGTTGGACAG AAATACGCAA 
GTTTTAACTC CAGCGCAGGC GGCAGTCAAC TTAGACCTGC CGAAAGAGTT CTACGCTATA 
TCAGCCGAAG AAATCAAACG GGAACAACAA ACCAGATCTG AAGTAGCGGA AAAGCAATTG 
CAGCTAAGAA CCAAAGCGAT GAGGGAAAAG GAGGAACTGC GGGAGATACG AAAATACAAA 
TTTTCACTGA TCAGAATCAG ATTTCCCGAT GGCGTCTACT TACAAGGCAC CTTCTCCATT 
TATGAAAAGC TTGGCGATGT CTTCGATTTC GTCCGAGAGA ACTTGGAATT CGACGGTTTG 
CCATTTCTTC TAAATCTACC AACGGGCCAA AAGTTCGCGG AAAAAGACCT GGATGTCACG 
CTGGTTGATC TTCGGCTGGT TCCTGCCACC ATTCTGATTT TCCAATGGGA TCCAAAATTT 
GAGGAAGAAA TAAAAGCATC TGGTAATGTC ACTTATCTTA AACCAGAAGT TGTTCTGCTA 
ATGCAGCAGC TGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC109536383 ( XM_019902571.1 ) cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle) -> XP_019758130.1 Dendroctonus ponderosae UBX domain-containing protein 6 (LOC109536383), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODe39778
Clone ID Related Accession (Same CDS sequence)	XM_019902572.1 , XM_019902571.1
Accession Version	XM_019902571.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1335bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-01-09
Organism	Dendroctonus ponderosae(mountain pine beetle)
Product	UBX domain-containing protein 6
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017852012.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Dendroctonus ponderosae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTCGGAGA AAATAGCTGA TAAGGTGAAG AATTTCTTCC AAAAAGCGAA GGCCGATGCG 
AAGTTCAAAA AGGCAGGGCC TGGTCGAAAG CTCACCGAAT CGCCATCATC CTCCACATCC 
GCTGTGTCTT CTCGAAAGAA GGGCGAGTAT GTGCCCCCTC AAAGATCCAC CCCATCGGAC 
GTAACCAGAC AGTCTGCAGC TGCAGCATTG GCTCGCATGT CCGACCCGGA GAGAGGCACC 
AATACCAAAA TATCTTTGAG CACACTCCAG GACGTGGTTC GAAGGGAATT TGACTCCCGA 
AACACAGACG CCACTGAGGT GCCTTCAGGG CCAAAGCAAA CTGAATCGGA GGCGTCGCCT 
CATTTGGCTG TAAAAGGGGT GTACTTCAAA TGCCCATTTG TTAGCGACGA GATCTTAAGC 
AGAGAAGAGT GGAGGATAAA AATCAAGGAG TTCCTAATGA CGGCTTTAGA GCACGAGGCT 
GTTTTAACAA CCTGTTTGAT TATCTATTCT TGCAATTACA ACAGAACAAA GGTACAAGAC 
TGCGTGAACA TCCTCTGCAG ATACATCGAC AACATTATCG GCAATCCATC AGAGACGAAA 
TTTCACAGAA TCCGATGCTC CAACGCAGCA TTTGCCGATA AAGTCGTCCC AGTGCTTGGG 
GCCACCGAGT TCCTACATGC CGCCGGGTTT CGACAGCAAA AACTGGAACA CAATGGCGCA 
GAGGAGGACT TCTTGGTATG GTCCCAAGAA AATGTAGAAG GAATCGACAC ATTGGAGATT 
TTACGCGATG CCCTTAAGTC GGAAAACCGA ATAGAGTTGG AGTTGGACAG AAATACGCAA 
GTTTTAACTC CAGCGCAGGC GGCAGTCAAC TTAGACCTGC CGAAAGAGTT CTACGCTATA 
TCAGCCGAAG AAATCAAACG GGAACAACAA ACCAGATCTG AAGTAGCGGA AAAGCAATTG 
CAGCTAAGAA CCAAAGCGAT GAGGGAAAAG GAGGAACTGC GGGAGATACG AAAATACAAA 
TTTTCACTGA TCAGAATCAG ATTTCCCGAT GGCGTCTACT TACAAGGCAC CTTCTCCATT 
TATGAAAAGC TTGGCGATGT CTTCGATTTC GTCCGAGAGA ACTTGGAATT CGACGGTTTG 
CCATTTCTTC TAAATCTACC AACGGGCCAA AAGTTCGCGG AAAAAGACCT GGATGTCACG 
CTGGTTGATC TTCGGCTGGT TCCTGCCACC ATTCTGATTT TCCAATGGGA TCCAAAATTT 
GAGGAAGAAA TAAAAGCATC TGGTAATGTC ACTTATCTTA AACCAGAAGT TGTTCTGCTA 
ATGCAGCAGC TGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019758130.1
CDS	436..1770
Translation	MSEKIADKVKNFFQKAKADAKFKKAGPGRKLTESPSSSTSAVSSRKKGEYVPPQRSTPSDVTRQSAAAALARMSDPERGTNTKISLSTLQDVVRREFDSRNTDATEVPSGPKQTESEASPHLAVKGVYFKCPFVSDEILSREEWRIKIKEFLMTALEHEAVLTTCLIIYSCNYNRTKVQDCVNILCRYIDNIIGNPSETKFHRIRCSNAAFADKVVPVLGATEFLHAAGFRQQKLEHNGAEEDFLVWSQENVEGIDTLEILRDALKSENRIELELDRNTQVLTPAQAAVNLDLPKEFYAISAEEIKREQQTRSEVAEKQLQLRTKAMREKEELREIRKYKFSLIRIRFPDGVYLQGTFSIYEKLGDVFDFVRENLEFDGLPFLLNLPTGQKFAEKDLDVTLVDLRLVPATILIFQWDPKFEEEIKASGNVTYLKPEVVLLMQQL

Target ORF information:

RefSeq Version	XM_019902571.1
Organism	Dendroctonus ponderosae(mountain pine beetle)
Definition	Dendroctonus ponderosae UBX domain-containing protein 6 (LOC109536383), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019902571.1

ORF Insert Sequence:

ATGTCGGAGA AAATAGCTGA TAAGGTGAAG AATTTCTTCC AAAAAGCGAA GGCCGATGCG 
AAGTTCAAAA AGGCAGGGCC TGGTCGAAAG CTCACCGAAT CGCCATCATC CTCCACATCC 
GCTGTGTCTT CTCGAAAGAA GGGCGAGTAT GTGCCCCCTC AAAGATCCAC CCCATCGGAC 
GTAACCAGAC AGTCTGCAGC TGCAGCATTG GCTCGCATGT CCGACCCGGA GAGAGGCACC 
AATACCAAAA TATCTTTGAG CACACTCCAG GACGTGGTTC GAAGGGAATT TGACTCCCGA 
AACACAGACG CCACTGAGGT GCCTTCAGGG CCAAAGCAAA CTGAATCGGA GGCGTCGCCT 
CATTTGGCTG TAAAAGGGGT GTACTTCAAA TGCCCATTTG TTAGCGACGA GATCTTAAGC 
AGAGAAGAGT GGAGGATAAA AATCAAGGAG TTCCTAATGA CGGCTTTAGA GCACGAGGCT 
GTTTTAACAA CCTGTTTGAT TATCTATTCT TGCAATTACA ACAGAACAAA GGTACAAGAC 
TGCGTGAACA TCCTCTGCAG ATACATCGAC AACATTATCG GCAATCCATC AGAGACGAAA 
TTTCACAGAA TCCGATGCTC CAACGCAGCA TTTGCCGATA AAGTCGTCCC AGTGCTTGGG 
GCCACCGAGT TCCTACATGC CGCCGGGTTT CGACAGCAAA AACTGGAACA CAATGGCGCA 
GAGGAGGACT TCTTGGTATG GTCCCAAGAA AATGTAGAAG GAATCGACAC ATTGGAGATT 
TTACGCGATG CCCTTAAGTC GGAAAACCGA ATAGAGTTGG AGTTGGACAG AAATACGCAA 
GTTTTAACTC CAGCGCAGGC GGCAGTCAAC TTAGACCTGC CGAAAGAGTT CTACGCTATA 
TCAGCCGAAG AAATCAAACG GGAACAACAA ACCAGATCTG AAGTAGCGGA AAAGCAATTG 
CAGCTAAGAA CCAAAGCGAT GAGGGAAAAG GAGGAACTGC GGGAGATACG AAAATACAAA 
TTTTCACTGA TCAGAATCAG ATTTCCCGAT GGCGTCTACT TACAAGGCAC CTTCTCCATT 
TATGAAAAGC TTGGCGATGT CTTCGATTTC GTCCGAGAGA ACTTGGAATT CGACGGTTTG 
CCATTTCTTC TAAATCTACC AACGGGCCAA AAGTTCGCGG AAAAAGACCT GGATGTCACG 
CTGGTTGATC TTCGGCTGGT TCCTGCCACC ATTCTGATTT TCCAATGGGA TCCAAAATTT 
GAGGAAGAAA TAAAAGCATC TGGTAATGTC ACTTATCTTA AACCAGAAGT TGTTCTGCTA 
ATGCAGCAGC TGTAA