LOC109536300 cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC109536300
Entrez Gene ID	109536300
Full Name	hypoxia-inducible factor 1-alpha
Gene Type	protein-coding
Organism	Dendroctonus ponderosae(mountain pine beetle)

mRNA and Protein(s)

mRNA	Protein	Name
XM_019902461.1	XP_019758020.1	hypoxia-inducible factor 1-alpha

Pathways from BioSystems
Gene Ontology

The following LOC109536300 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC109536300 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODe39678	XM_019902461.1 Latest version!	Dendroctonus ponderosae hypoxia-inducible factor 1-alpha (LOC109536300), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC109536300 ( XM_019902461.1 ) cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle) -> XP_019758020.1 Dendroctonus ponderosae hypoxia-inducible factor 1-alpha (LOC109536300), mRNA.

Price & Availability↑

CloneID	ODe39678
Clone ID Related Accession (Same CDS sequence)	XM_019902461.1
Accession Version	XM_019902461.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2580bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-01-09
Organism	Dendroctonus ponderosae(mountain pine beetle)
Product	hypoxia-inducible factor 1-alpha
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017852012.1) and transcript sequence (GAFX01014032.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Dendroctonus ponderosae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 561 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGGATACAA AGCCCAAAGC CCCCAAAGAA AAACGAAGGA ATAACGAAAA ACGGAAAGAA 
AAGTCTCGAG ATGCCGCCCG ATCAAGACGA TCCAGGGAAA CGGAAATTTT CACGGATCTT 
GGAAATGCCC TTCCAATTTC TTCCGAGCAA ATTTCCCAGC TCGATAAAGC TTCGGTAATG 
CGATTGGCCA TCTCCTACTT GAGAGTGCGA GATATGATCC AGCTAATTCC TCTATTGCCC 
GTTAAAGACA CAATACACAA AAGCCTGAAA GATGAATCGG CTTTCCTAAA ATCGCTGGAA 
GGATTCGTTC TAGTCGTATC ATCCGAAGGC GACTTCGTTT ACTTGTCTGA GAACGTGAGC 
GACTATTTAG GAATTACACA GATCGATCTT CTGGGTCAAA ATATCTACGA GTACAGCCAT 
CCATGTGACC ACGATGAAAT CCGAGACATC CTGGCGGTGA AGACTCAAGA GGAAAGCGAC 
TCCCCAAAAT CGGTTTTCAT AAGATTGAAG TGCACGTTAA CCAGCAAGGG GCGATCAGTT 
AACTTGAAAT CGGCCACTTT CAAAGTGATT CACTGCACTG GTCATATGAT CAAAGAGAGG 
CAACCCGAGG AAGAAGAGAA AGGCAAAGTC TCTTGCTGTT TGGTTGCGGT TGGGCAGCCG 
ATTCCTCATC CTTCCAACAT CGATACACCT CTTCCTCGGC AGACCTTTTT AACGAAACAC 
AGCATGGACA TGAAATTCAC ACATGCCGAC GATGAGTTCA TGGTTGAGAC GTTGGGTTAC 
ACACCAGAAG ACCTAATTGG AACGTCGGTG TACGAATATC ACCATGCAAT GGACAGTGAT 
TCGATTGGGT CGGCGTTCAA ATGCTTGTTT TCCAAAGGAC AATGTGAGAC AAACCGCTAC 
AGATTTCTGG CAAAAACCGG CGGTTACGTA TGGGTGGTGA CTCAGGCCAC TTTAATTTTG 
GACAAAATGC AGAAAGCTCA AAGTGTTGTG TGTGTTAATT TCGTCATAAG TGGTGTGGAA 
TGCAAAGATG AAGTTTACTC GGCCCATCAG TTGGCCTGTG TGAAGTACGA AACGTCGCCC 
ACCCTTGAAT CGGCCAGCCA GATTGGGTGC TCAGTGTTGA GACCAAAAGT GATCGTCGAA 
CCAATAGATA ATAATAACGG TGGCAGTAGC AAGAAATCGG CGATAGAAGC GGATTGTCCT 
CCATCGCCAC TTAAAACCGT ACCACCAAGA TCACGGCCGA TCGCAGTTAC TGCCAAGTTG 
TTTTCCTCAT TCGAACCACC GAAGGAACCA CCCGCAGAAA GTGCTGGCCG GCCTCATACG 
GCGACGAAGA CGATTTTCGC TCCAAGGACC GAGGATATGA GTAAGGGATT CTTAACGTTT 
TCGGAGGAGG AACCTGGCTT AACAATGCTG AAAGACGAGC CCGATGATTT AACCCACTTG 
GCCCCAGTGG CCGGTGATGT GTGTGTTCCG CTGGATGAAA ACCCCTTTAT AACAGACATT 
CTGGATGATT TCCTGTTGAA AGAGAACAGC TTTGGCCCAT TGCTGACCGA TGAGCCATCA 
GATCCGTTCA TTTCGTTTCG CGACTACCGC GATTCTTCAC CCCAGCTGTT GTCGCCGAAT 
TTATCGAAGA ACTCTGACAG CTTACCATCG TTGTGCAGTC CAAACAGTTC CCTACTGGAT 
GAGGATCAAA TGTCCACTTT CATGAACCTG CAAATGGACG ACGATCCGGA CTTGGTCATG 
AAGGCGCCAT ATATTCCGAT GAATTTCTCC GACGATTTGC CATTGTTAAT GTCCACCGAC 
CTGATGTGGA ACAATAACGA CAAAAATAAG AGTAACAGTC GGGTAGATAG TGGTTCGACG 
TTGGCGCAGA TGTTGGGCTC ATCTGCGAAC AAACGTCCCC AGAAAGGTAC TGATAGGGGT 
GGAGGAACGG TGGAGGAAAC TAATGCCGAT GTGATTAATG AGAAAACTTC AAATTGTAGT 
TGGAGTACAA AGCTGAGTCC CAAAATGGAG GTGGACAGTG TCGGGCAAAT GGACCGTTCG 
CCCAATTTAA AGCGATCAAA TAATTCAAAT TACGAACACC AAACGAAGAA AATAAAAAAC 
GAGCCTAAGG AGAAGATGTC GTCCGAGCTG TTGCATCAGC TGATATCGAA TAATCATCAA 
AGAGGCAGGC CGAAAAGTAA AGGAAACTGG CTGTTGGATA CGGGCGGAAA GGCCGCCTGT 
ATATCACAGC CCAGTGATAG TGTCTTAATG AACCTTTTGG AAGCTGATAA GCCTCCAAAA 
GCGGCTGCAG AAGTGCTGCC CATCCAAACT CGTGTGAGCG CTGGGCGCGG CTTGATCAAT 
GCGAATTTGC TGGGCAGGAA AAAGATGTTG CATCAAAAGC AGCAGGAAAA GTATCGAAAG 
CAGGTGCAGT CTAAAGGCAG TCTGATGCGG AAGAATTCGC TTGCCATGGT GGATCCCGAG 
TCCGTACCAT CTCTGCTCGA TCTAACCCAG CAGGACTTTG AGCTGAATGC TCCTGTGGAT 
TCTTCGCTGC TGCAAGGCGA AGAGCTGCTG ATCGCTCTGG AAGTTGCGCA GAGCATTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019758020.1
CDS	160..2739
Translation	MDTKPKAPKEKRRNNEKRKEKSRDAARSRRSRETEIFTDLGNALPISSEQISQLDKASVMRLAISYLRVRDMIQLIPLLPVKDTIHKSLKDESAFLKSLEGFVLVVSSEGDFVYLSENVSDYLGITQIDLLGQNIYEYSHPCDHDEIRDILAVKTQEESDSPKSVFIRLKCTLTSKGRSVNLKSATFKVIHCTGHMIKERQPEEEEKGKVSCCLVAVGQPIPHPSNIDTPLPRQTFLTKHSMDMKFTHADDEFMVETLGYTPEDLIGTSVYEYHHAMDSDSIGSAFKCLFSKGQCETNRYRFLAKTGGYVWVVTQATLILDKMQKAQSVVCVNFVISGVECKDEVYSAHQLACVKYETSPTLESASQIGCSVLRPKVIVEPIDNNNGGSSKKSAIEADCPPSPLKTVPPRSRPIAVTAKLFSSFEPPKEPPAESAGRPHTATKTIFAPRTEDMSKGFLTFSEEEPGLTMLKDEPDDLTHLAPVAGDVCVPLDENPFITDILDDFLLKENSFGPLLTDEPSDPFISFRDYRDSSPQLLSPNLSKNSDSLPSLCSPNSSLLDEDQMSTFMNLQMDDDPDLVMKAPYIPMNFSDDLPLLMSTDLMWNNNDKNKSNSRVDSGSTLAQMLGSSANKRPQKGTDRGGGTVEETNADVINEKTSNCSWSTKLSPKMEVDSVGQMDRSPNLKRSNNSNYEHQTKKIKNEPKEKMSSELLHQLISNNHQRGRPKSKGNWLLDTGGKAACISQPSDSVLMNLLEADKPPKAAAEVLPIQTRVSAGRGLINANLLGRKKMLHQKQQEKYRKQVQSKGSLMRKNSLAMVDPESVPSLLDLTQQDFELNAPVDSSLLQGEELLIALEVAQSI

Target ORF information:

RefSeq Version	XM_019902461.1
Organism	Dendroctonus ponderosae(mountain pine beetle)
Definition	Dendroctonus ponderosae hypoxia-inducible factor 1-alpha (LOC109536300), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019902461.1

ORF Insert Sequence:

ATGGATACAA AGCCCAAAGC CCCCAAAGAA AAACGAAGGA ATAACGAAAA ACGGAAAGAA 
AAGTCTCGAG ATGCCGCCCG ATCAAGACGA TCCAGGGAAA CGGAAATTTT CACGGATCTT 
GGAAATGCCC TTCCAATTTC TTCCGAGCAA ATTTCCCAGC TCGATAAAGC TTCGGTAATG 
CGATTGGCCA TCTCCTACTT GAGAGTGCGA GATATGATCC AGCTAATTCC TCTATTGCCC 
GTTAAAGACA CAATACACAA AAGCCTGAAA GATGAATCGG CTTTCCTAAA ATCGCTGGAA 
GGATTCGTTC TAGTCGTATC ATCCGAAGGC GACTTCGTTT ACTTGTCTGA GAACGTGAGC 
GACTATTTAG GAATTACACA GATCGATCTT CTGGGTCAAA ATATCTACGA GTACAGCCAT 
CCATGTGACC ACGATGAAAT CCGAGACATC CTGGCGGTGA AGACTCAAGA GGAAAGCGAC 
TCCCCAAAAT CGGTTTTCAT AAGATTGAAG TGCACGTTAA CCAGCAAGGG GCGATCAGTT 
AACTTGAAAT CGGCCACTTT CAAAGTGATT CACTGCACTG GTCATATGAT CAAAGAGAGG 
CAACCCGAGG AAGAAGAGAA AGGCAAAGTC TCTTGCTGTT TGGTTGCGGT TGGGCAGCCG 
ATTCCTCATC CTTCCAACAT CGATACACCT CTTCCTCGGC AGACCTTTTT AACGAAACAC 
AGCATGGACA TGAAATTCAC ACATGCCGAC GATGAGTTCA TGGTTGAGAC GTTGGGTTAC 
ACACCAGAAG ACCTAATTGG AACGTCGGTG TACGAATATC ACCATGCAAT GGACAGTGAT 
TCGATTGGGT CGGCGTTCAA ATGCTTGTTT TCCAAAGGAC AATGTGAGAC AAACCGCTAC 
AGATTTCTGG CAAAAACCGG CGGTTACGTA TGGGTGGTGA CTCAGGCCAC TTTAATTTTG 
GACAAAATGC AGAAAGCTCA AAGTGTTGTG TGTGTTAATT TCGTCATAAG TGGTGTGGAA 
TGCAAAGATG AAGTTTACTC GGCCCATCAG TTGGCCTGTG TGAAGTACGA AACGTCGCCC 
ACCCTTGAAT CGGCCAGCCA GATTGGGTGC TCAGTGTTGA GACCAAAAGT GATCGTCGAA 
CCAATAGATA ATAATAACGG TGGCAGTAGC AAGAAATCGG CGATAGAAGC GGATTGTCCT 
CCATCGCCAC TTAAAACCGT ACCACCAAGA TCACGGCCGA TCGCAGTTAC TGCCAAGTTG 
TTTTCCTCAT TCGAACCACC GAAGGAACCA CCCGCAGAAA GTGCTGGCCG GCCTCATACG 
GCGACGAAGA CGATTTTCGC TCCAAGGACC GAGGATATGA GTAAGGGATT CTTAACGTTT 
TCGGAGGAGG AACCTGGCTT AACAATGCTG AAAGACGAGC CCGATGATTT AACCCACTTG 
GCCCCAGTGG CCGGTGATGT GTGTGTTCCG CTGGATGAAA ACCCCTTTAT AACAGACATT 
CTGGATGATT TCCTGTTGAA AGAGAACAGC TTTGGCCCAT TGCTGACCGA TGAGCCATCA 
GATCCGTTCA TTTCGTTTCG CGACTACCGC GATTCTTCAC CCCAGCTGTT GTCGCCGAAT 
TTATCGAAGA ACTCTGACAG CTTACCATCG TTGTGCAGTC CAAACAGTTC CCTACTGGAT 
GAGGATCAAA TGTCCACTTT CATGAACCTG CAAATGGACG ACGATCCGGA CTTGGTCATG 
AAGGCGCCAT ATATTCCGAT GAATTTCTCC GACGATTTGC CATTGTTAAT GTCCACCGAC 
CTGATGTGGA ACAATAACGA CAAAAATAAG AGTAACAGTC GGGTAGATAG TGGTTCGACG 
TTGGCGCAGA TGTTGGGCTC ATCTGCGAAC AAACGTCCCC AGAAAGGTAC TGATAGGGGT 
GGAGGAACGG TGGAGGAAAC TAATGCCGAT GTGATTAATG AGAAAACTTC AAATTGTAGT 
TGGAGTACAA AGCTGAGTCC CAAAATGGAG GTGGACAGTG TCGGGCAAAT GGACCGTTCG 
CCCAATTTAA AGCGATCAAA TAATTCAAAT TACGAACACC AAACGAAGAA AATAAAAAAC 
GAGCCTAAGG AGAAGATGTC GTCCGAGCTG TTGCATCAGC TGATATCGAA TAATCATCAA 
AGAGGCAGGC CGAAAAGTAA AGGAAACTGG CTGTTGGATA CGGGCGGAAA GGCCGCCTGT 
ATATCACAGC CCAGTGATAG TGTCTTAATG AACCTTTTGG AAGCTGATAA GCCTCCAAAA 
GCGGCTGCAG AAGTGCTGCC CATCCAAACT CGTGTGAGCG CTGGGCGCGG CTTGATCAAT 
GCGAATTTGC TGGGCAGGAA AAAGATGTTG CATCAAAAGC AGCAGGAAAA GTATCGAAAG 
CAGGTGCAGT CTAAAGGCAG TCTGATGCGG AAGAATTCGC TTGCCATGGT GGATCCCGAG 
TCCGTACCAT CTCTGCTCGA TCTAACCCAG CAGGACTTTG AGCTGAATGC TCCTGTGGAT 
TCTTCGCTGC TGCAAGGCGA AGAGCTGCTG ATCGCTCTGG AAGTTGCGCA GAGCATTTAG