LOC109533139 cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC109533139
Entrez Gene ID	109533139
Full Name	uncharacterized LOC109533139
Gene Type	protein-coding
Organism	Dendroctonus ponderosae(mountain pine beetle)

mRNA and Protein(s)

mRNA	Protein	Name
XM_019898390.1	XP_019753949.1	uncharacterized protein LOC109533139

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Quantitative metabolome, proteome and transcriptome analysis of midgut and fat body tissues in the mountain pine beetle, Dendroctonus ponderosae Hopkins, and insights into pheromone biosynthesis.
Keeling CI, Li M, Sandhu HK, Henderson H, Yuen MM, Bohlmann J
Insect biochemistry and molecular biology70170-83(2016 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC109533139 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC109533139 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODe34006	XM_019898390.1 Latest version!	Dendroctonus ponderosae uncharacterized LOC109533139 (LOC109533139), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC109533139 ( XM_019898390.1 ) cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle) -> XP_019753949.1 Dendroctonus ponderosae uncharacterized LOC109533139 (LOC109533139), mRNA.

Price & Availability↑

CloneID	ODe34006
Clone ID Related Accession (Same CDS sequence)	XM_019898390.1
Accession Version	XM_019898390.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 954bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-01-09
Organism	Dendroctonus ponderosae(mountain pine beetle)
Product	uncharacterized protein LOC109533139
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017846528.1) and transcript sequence (GDAR01013517.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Dendroctonus ponderosae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 247 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGAACCCGG ACTCTGCCTC GAAATCAGAA AAATTCTTTT GTGGATGTTG CGCCAAGCAG 
GAGGAGTTCA ACAGCGACGA CGTGATCTTT GATTATTTCG GCAAGGAGTT TTCCGAGTAT 
GAGTATGTGA TTGAAAATTT GGCCATCCGA CCCGCTCCGA AGAAGCTTTT GGACTTGGTT 
CCGGTGCATT CTACCAACAT TTCCAGCAAA ATCAGCTCGC AACTCGCTAC AGCGTATCCT 
CCTTGCGAAC CCTTGCAATC CACCTCCAAA GTGATGTGCC ATAATCCATC AGCAACGGGA 
GAAGGAGATT CACGCAAGTC CCCGGACAAT TCGCTGAAAA TCCGCGATGT GACCTCCGAT 
TTCATATCGT TTAAAGCTCC AGATGAAAAT CCGCCAGTTT CAAGCTTCAT TCCTCGATCT 
TTGCCTGGTT GCTCTACTGG AGACCAGCGC GCTCCCAAAG ACATCACCGA GTTGCGGCAA 
ACAATCAGGA GCAAAGAGTA CCGAACAAAA AAGCAGATTC TCTCGGATCT GTACGAGGCA 
AGTGAGCAGT CGCTGATGAT TCGGCCGAAT GCCTCCAAGC TCAGCAACCG GCCGATGCCG 
AGCGAAATTA AAAACACCAT AGAAACTCTG AAGTTCAAAA AGCCGGTTCC GCAGTTCTTC 
ACTAGAACGG AAAAGCGACT CTTTCATACT CCGGGAGTTT ATTTCGCTGA GACCAAAGGC 
AGCAATCCAG TGTCGATCGG AACAGGAGAA GGAAGCAGCG AACAAGGAGG GTCCGAAGCC 
ACGCTGGATA TTCTGCAGCC GACACACGAG CTCCGGTCGC ATAACAGTAA TTACTATGCG 
GTTGATTCAG GGGCCCAAAC CGATGTTTCC CCGGCATGTC CTTGCCCAAA GAAGGACAAG 
AAGAGCTTGA AGTGGAAAAT CATCATCAAC AAGCACTCGG ATTGTAAACG TTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019753949.1
CDS	26..979
Translation	MNPDSASKSEKFFCGCCAKQEEFNSDDVIFDYFGKEFSEYEYVIENLAIRPAPKKLLDLVPVHSTNISSKISSQLATAYPPCEPLQSTSKVMCHNPSATGEGDSRKSPDNSLKIRDVTSDFISFKAPDENPPVSSFIPRSLPGCSTGDQRAPKDITELRQTIRSKEYRTKKQILSDLYEASEQSLMIRPNASKLSNRPMPSEIKNTIETLKFKKPVPQFFTRTEKRLFHTPGVYFAETKGSNPVSIGTGEGSSEQGGSEATLDILQPTHELRSHNSNYYAVDSGAQTDVSPACPCPKKDKKSLKWKIIINKHSDCKR

Target ORF information:

RefSeq Version	XM_019898390.1
Organism	Dendroctonus ponderosae(mountain pine beetle)
Definition	Dendroctonus ponderosae uncharacterized LOC109533139 (LOC109533139), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019898390.1

ORF Insert Sequence:

ATGAACCCGG ACTCTGCCTC GAAATCAGAA AAATTCTTTT GTGGATGTTG CGCCAAGCAG 
GAGGAGTTCA ACAGCGACGA CGTGATCTTT GATTATTTCG GCAAGGAGTT TTCCGAGTAT 
GAGTATGTGA TTGAAAATTT GGCCATCCGA CCCGCTCCGA AGAAGCTTTT GGACTTGGTT 
CCGGTGCATT CTACCAACAT TTCCAGCAAA ATCAGCTCGC AACTCGCTAC AGCGTATCCT 
CCTTGCGAAC CCTTGCAATC CACCTCCAAA GTGATGTGCC ATAATCCATC AGCAACGGGA 
GAAGGAGATT CACGCAAGTC CCCGGACAAT TCGCTGAAAA TCCGCGATGT GACCTCCGAT 
TTCATATCGT TTAAAGCTCC AGATGAAAAT CCGCCAGTTT CAAGCTTCAT TCCTCGATCT 
TTGCCTGGTT GCTCTACTGG AGACCAGCGC GCTCCCAAAG ACATCACCGA GTTGCGGCAA 
ACAATCAGGA GCAAAGAGTA CCGAACAAAA AAGCAGATTC TCTCGGATCT GTACGAGGCA 
AGTGAGCAGT CGCTGATGAT TCGGCCGAAT GCCTCCAAGC TCAGCAACCG GCCGATGCCG 
AGCGAAATTA AAAACACCAT AGAAACTCTG AAGTTCAAAA AGCCGGTTCC GCAGTTCTTC 
ACTAGAACGG AAAAGCGACT CTTTCATACT CCGGGAGTTT ATTTCGCTGA GACCAAAGGC 
AGCAATCCAG TGTCGATCGG AACAGGAGAA GGAAGCAGCG AACAAGGAGG GTCCGAAGCC 
ACGCTGGATA TTCTGCAGCC GACACACGAG CTCCGGTCGC ATAACAGTAA TTACTATGCG 
GTTGATTCAG GGGCCCAAAC CGATGTTTCC CCGGCATGTC CTTGCCCAAA GAAGGACAAG 
AAGAGCTTGA AGTGGAAAAT CATCATCAAC AAGCACTCGG ATTGTAAACG TTAA