tbr1b cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	tbr1b
Entrez Gene ID	58042
Full Name	T-box, brain, 1b
Synonyms	tbr1
General protein information	Preferred Names T-box, brain, 1b Names T-box brain protein 1 T-box 1, brain T-box brain 1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001115090.3	NP_001108562.1	T-box brain protein 1

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Tbr1	NP_033348.2
Homo sapiens (human)	TBR1	NP_006584.1
Pan troglodytes (chimpanzee)	TBR1	XP_001150172.1
Bos taurus (cattle)	TBR1	NP_001178978.1
Rattus norvegicus (Norway rat)	Tbr1	NP_001177999.1
Canis lupus familiaris (dog)	TBR1	XP_545492.2
Gallus gallus (chicken)	TBR1	XP_003641686.1
Danio rerio (zebrafish)	tbr1b	NP_001108562.1
Xenopus tropicalis (tropical clawed frog)	tbr1	NP_001072587.1

Gene Ontology
Bibliography

Related articles in PubMed

Life-Long Neurogenic Activity of Individual Neural Stem Cells and Continuous Growth Establish an Outside-In Architecture in the Teleost Pallium.
Furlan G, Cuccioli V, Vuillemin N, Dirian L, Muntasell AJ, Coolen M, Dray N, Bedu S, Houart C, Beaurepaire E, Foucher I, Bally-Cuif L
Current biology : CB27(21)3288-3301.e3(2017 Nov)

Brorin is required for neurogenesis, gliogenesis, and commissural axon guidance in the zebrafish forebrain.
Miyake A, Mekata Y, Fujibayashi H, Nakanishi K, Konishi M, Itoh N
PloS one12(4)e0176036(2017)

Afferent Connectivity of the Zebrafish Habenulae.
Turner KJ, Hawkins TA, Y??ez J, Anad?n R, Wilson SW, Folgueira M
Frontiers in neural circuits1030(2016)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following tbr1b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tbr1b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa98372	NM_001115090.3 Latest version!	Danio rerio T-box brain transcription factor 1b (tbr1b), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

tbr1b ( NM_001115090.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001108562.1 Danio rerio T-box brain transcription factor 1b (tbr1b), mRNA.

Price & Availability↑

CloneID	ODa98372
Clone ID Related Accession (Same CDS sequence)	NM_001115090.3
Accession Version	NM_001115090.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2031bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-14
Organism	Danio rerio(zebrafish)
Product	T-box brain protein 1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU651665.6. On Oct 1, 2016 this sequence version replaced NM_001115090.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC168510.1, GFIL01040487.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGCAGCTCG AGCGTTGCAT CTCGCCAGCT CTCGCGCGCT CCAAGAAATG TATGATTGTG 
GGCAGTGGCT ACCCAAACGC ACAAGCGTCT GAGCTCGCCT TGCAGGACTA CCCTATTATA 
TCAATCGGCG ACAACCTGGA GAGAAGTTCA CCTCTGAAAA AAAACTCCGC TGGGATGACG 
AATCAGTCAG AGGCAGACAA TTTCGCCGAC TCGAAGGACT CATCAGGGGA CGTCCAGCGA 
GGCAAACTCT CTCCTGATCT TGACGGAGTC GCCGACAGTC GTCACACTTT CGATGGATCT 
GCAGGAGAAA GGTATCTCCT GTCTCAGTCC AGTCAAGTTC AGCCGAGTCC TACCACCATG 
TTTCCCTACC CGAGTCAGCA TGGACCGACG CACCCGGCTT TCTCCATCGC CAGCCCGAGC 
CGCTACATGG CGCACCACCC GGTCATCACG AACGGAGCCT ACAACAGCCT ATTGAGCAAC 
TCTTCTCCGC AAGGTTACGC GACCGCCGGG TACCCGTACG CGCAACAGTA TGGACACGCG 
TACCAGGGCA CGGCTTTCTA CCAGTTTTCC TCCGCGCAAG CAGGACTCGT GCCCGGCAAA 
GCGCAGGTTT ACCTCTGCAA CAGGGCCCTG TGGCTTAAAT TCCACAGGCA TCAAACGGAG 
ATGATTATTA CCAAGCAGGG ACGACGAATG TTCCCGTTTT TGAGTTTCAA TATATCTGGT 
CTCGACCCAA CGGCGCATTA CAATATCTTT GTGGACGTGA TTCTTGCTGA TCCGAATCAC 
TGGCGCTTTC AAGGAGGAAA ATGGGTCCCG TGCGGCAAAG CGGATACGAA TGTAACAGGG 
AACAGAGTGT ACATGCACCC GGATTCGCCA AACACCGGCG CGCACTGGAT GCGTCAAGAG 
ATTTCCTTTG GAAAACTTAA GCTAACCAAC AATAAAGGAG CAACCAACAA CACAGGACAG 
ATGGTCGTCC TGCAGTCGCT GCATAAATAC CAGCCTCGAC TGCATGTGGT GCAGGTGAAC 
GAGGACGGAA CGGAGGACAC GAGCCAACCC GGGCGCGTGC AGACCTTCAC TTTCCCCGAG 
ACGCAGTTCA TTGCTGTCAC CGCATATCAA AACACTGATA TCACGCAGCT AAAAATCGAC 
CACAACCCAT TCGCGAAAGG ATTCCGTGAC AATTATGACA CTGTCTACAC AGGCTGCGAC 
ATCGATCGGT TGACGCCGTC CCCGGGTGAC TCTCCGCGCT CTCAGATCAT GCCTAGCGCA 
AGATATGCCA TGACTGGTTC TTTCCTGCAG GACCAATTTG TCAGCTCGTA TGCCAAGTCC 
CGCTTTCACC CTGGCGTCGG AGGCGCTCCT GGCACGGACC GCAGCGTCCC ACTTAGTAAC 
AGCTTGCTCT CCCCGCAACA AACCGAGGAG ACCACGGTGG CCTCCCCGCA GCGATGGTTT 
GTCACCCCTG CCAACAACCG ACTGGACTTT GCCGCCTCGG CATACGATGC TGCTGCGGCT 
GCTGATTTCG CCGGTAACGC GGCCACCCTT CTGTCGTACG CAGCTGCCGG AGTTAAAGCG 
CTGCCCCTGC CCGGTGCGGG ATGCTCCAAC AGACCTCTGG GGTATTACGG CGAGCCGCCG 
GGGTGGGGCA CCCGCACACC ACCGCAATAT TGCAGTAAAT CCAGCTCTGT TCTGTCTTGC 
TGGCCGTCCA ACTCCGTAGG GAGCAGAACG ACCGCCTCAA GCTACCTGGT CCCGGGACTA 
GAGGACGGAG ACCCCATTGC GCCCGAGAGG TCACCGCTAG GCGGGGCGGA TGAGTCCAAA 
CCTAAAGACC TGTCTGAATC CAGCTGGATA GAAACCCCGT CCTCAATTAA GTCGATCGAT 
TCGAGCGATT CTGGGATTTT TGAGCAAGCC AAGCGGAGGA GGATTTCGCC ATCTGCCACG 
CCGGTTTCCG AGACGTCGTC TCCATTAAAA TCTGAAATGT TGACGCCGAG GGAATGCGAG 
AAAAACTGCT CCAAGGACAT CGGCTACTAC AGCTTTTACC CCCACAGTTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001108562.1
CDS	85..2115
Translation	MQLERCISPALARSKKCMIVGSGYPNAQASELALQDYPIISIGDNLERSSPLKKNSAGMTNQSEADNFADSKDSSGDVQRGKLSPDLDGVADSRHTFDGSAGERYLLSQSSQVQPSPTTMFPYPSQHGPTHPAFSIASPSRYMAHHPVITNGAYNSLLSNSSPQGYATAGYPYAQQYGHAYQGTAFYQFSSAQAGLVPGKAQVYLCNRALWLKFHRHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILADPNHWRFQGGKWVPCGKADTNVTGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGATNNTGQMVVLQSLHKYQPRLHVVQVNEDGTEDTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDTVYTGCDIDRLTPSPGDSPRSQIMPSARYAMTGSFLQDQFVSSYAKSRFHPGVGGAPGTDRSVPLSNSLLSPQQTEETTVASPQRWFVTPANNRLDFAASAYDAAAAADFAGNAATLLSYAAAGVKALPLPGAGCSNRPLGYYGEPPGWGTRTPPQYCSKSSSVLSCWPSNSVGSRTTASSYLVPGLEDGDPIAPERSPLGGADESKPKDLSESSWIETPSSIKSIDSSDSGIFEQAKRRRISPSATPVSETSSPLKSEMLTPRECEKNCSKDIGYYSFYPHS

Target ORF information:

RefSeq Version	NM_001115090.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio T-box brain transcription factor 1b (tbr1b), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001115090.3

ORF Insert Sequence:

ATGCAGCTCG AGCGTTGCAT CTCGCCAGCT CTCGCGCGCT CCAAGAAATG TATGATTGTG 
GGCAGTGGCT ACCCAAACGC ACAAGCGTCT GAGCTCGCCT TGCAGGACTA CCCTATTATA 
TCAATCGGCG ACAACCTGGA GAGAAGTTCA CCTCTGAAAA AAAACTCCGC TGGGATGACG 
AATCAGTCAG AGGCAGACAA TTTCGCCGAC TCGAAGGACT CATCAGGGGA CGTCCAGCGA 
GGCAAACTCT CTCCTGATCT TGACGGAGTC GCCGACAGTC GTCACACTTT CGATGGATCT 
GCAGGAGAAA GGTATCTCCT GTCTCAGTCC AGTCAAGTTC AGCCGAGTCC TACCACCATG 
TTTCCCTACC CGAGTCAGCA TGGACCGACG CACCCGGCTT TCTCCATCGC CAGCCCGAGC 
CGCTACATGG CGCACCACCC GGTCATCACG AACGGAGCCT ACAACAGCCT ATTGAGCAAC 
TCTTCTCCGC AAGGTTACGC GACCGCCGGG TACCCGTACG CGCAACAGTA TGGACACGCG 
TACCAGGGCA CGGCTTTCTA CCAGTTTTCC TCCGCGCAAG CAGGACTCGT GCCCGGCAAA 
GCGCAGGTTT ACCTCTGCAA CAGGGCCCTG TGGCTTAAAT TCCACAGGCA TCAAACGGAG 
ATGATTATTA CCAAGCAGGG ACGACGAATG TTCCCGTTTT TGAGTTTCAA TATATCTGGT 
CTCGACCCAA CGGCGCATTA CAATATCTTT GTGGACGTGA TTCTTGCTGA TCCGAATCAC 
TGGCGCTTTC AAGGAGGAAA ATGGGTCCCG TGCGGCAAAG CGGATACGAA TGTAACAGGG 
AACAGAGTGT ACATGCACCC GGATTCGCCA AACACCGGCG CGCACTGGAT GCGTCAAGAG 
ATTTCCTTTG GAAAACTTAA GCTAACCAAC AATAAAGGAG CAACCAACAA CACAGGACAG 
ATGGTCGTCC TGCAGTCGCT GCATAAATAC CAGCCTCGAC TGCATGTGGT GCAGGTGAAC 
GAGGACGGAA CGGAGGACAC GAGCCAACCC GGGCGCGTGC AGACCTTCAC TTTCCCCGAG 
ACGCAGTTCA TTGCTGTCAC CGCATATCAA AACACTGATA TCACGCAGCT AAAAATCGAC 
CACAACCCAT TCGCGAAAGG ATTCCGTGAC AATTATGACA CTGTCTACAC AGGCTGCGAC 
ATCGATCGGT TGACGCCGTC CCCGGGTGAC TCTCCGCGCT CTCAGATCAT GCCTAGCGCA 
AGATATGCCA TGACTGGTTC TTTCCTGCAG GACCAATTTG TCAGCTCGTA TGCCAAGTCC 
CGCTTTCACC CTGGCGTCGG AGGCGCTCCT GGCACGGACC GCAGCGTCCC ACTTAGTAAC 
AGCTTGCTCT CCCCGCAACA AACCGAGGAG ACCACGGTGG CCTCCCCGCA GCGATGGTTT 
GTCACCCCTG CCAACAACCG ACTGGACTTT GCCGCCTCGG CATACGATGC TGCTGCGGCT 
GCTGATTTCG CCGGTAACGC GGCCACCCTT CTGTCGTACG CAGCTGCCGG AGTTAAAGCG 
CTGCCCCTGC CCGGTGCGGG ATGCTCCAAC AGACCTCTGG GGTATTACGG CGAGCCGCCG 
GGGTGGGGCA CCCGCACACC ACCGCAATAT TGCAGTAAAT CCAGCTCTGT TCTGTCTTGC 
TGGCCGTCCA ACTCCGTAGG GAGCAGAACG ACCGCCTCAA GCTACCTGGT CCCGGGACTA 
GAGGACGGAG ACCCCATTGC GCCCGAGAGG TCACCGCTAG GCGGGGCGGA TGAGTCCAAA 
CCTAAAGACC TGTCTGAATC CAGCTGGATA GAAACCCCGT CCTCAATTAA GTCGATCGAT 
TCGAGCGATT CTGGGATTTT TGAGCAAGCC AAGCGGAGGA GGATTTCGCC ATCTGCCACG 
CCGGTTTCCG AGACGTCGTC TCCATTAAAA TCTGAAATGT TGACGCCGAG GGAATGCGAG 
AAAAACTGCT CCAAGGACAT CGGCTACTAC AGCTTTTACC CCCACAGTTA G